RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
SPIDR-212ENST00000519661 CPS1P31327 1500 aa17.13■□□□□ 0.33
SPIDR-212ENST00000519661 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
SPIDR-212ENST00000519661 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
SPIDR-212ENST00000519661 RPGRIP1LQ68CZ1 1315 aa17.12■□□□□ 0.33
SPIDR-212ENST00000519661 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
SPIDR-212ENST00000519661 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
SPIDR-212ENST00000519661 DIP2AQ14689 1571 aa17.11■□□□□ 0.33
SPIDR-212ENST00000519661 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
SPIDR-212ENST00000519661 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-212ENST00000519661 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
SPIDR-212ENST00000519661 CERKQ8TCT0 537 aa17.09■□□□□ 0.33
SPIDR-212ENST00000519661 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
SPIDR-212ENST00000519661 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
SPIDR-212ENST00000519661 KIF1BO60333 1816 aa17.08■□□□□ 0.33
SPIDR-212ENST00000519661 TRIM26Q12899 539 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-212ENST00000519661 TBX22Q9Y458 520 aa17.08■□□□□ 0.32
SPIDR-212ENST00000519661 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
SPIDR-212ENST00000519661 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
SPIDR-212ENST00000519661 FOXD1Q16676 465 aa17.06■□□□□ 0.32
SPIDR-212ENST00000519661 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
SPIDR-212ENST00000519661 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
SPIDR-212ENST00000519661 STRCP1A6NGW2 1772 aa17.02■□□□□ 0.32
SPIDR-212ENST00000519661 LRRC7Q96NW7 1537 aa17.02■□□□□ 0.32
SPIDR-212ENST00000519661 KCNA6P17658 529 aa17.02■□□□□ 0.32
SPIDR-212ENST00000519661 PPLO60437 1756 aa17.02■□□□□ 0.31
SPIDR-212ENST00000519661 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
SPIDR-212ENST00000519661 FBXO41Q8TF61 875 aa17.01■□□□□ 0.31
SPIDR-212ENST00000519661 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
SPIDR-212ENST00000519661 MYOM2P54296 1465 aa17■□□□□ 0.31
SPIDR-212ENST00000519661 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
SPIDR-212ENST00000519661 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
SPIDR-212ENST00000519661 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
SPIDR-212ENST00000519661 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
SPIDR-212ENST00000519661 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
SPIDR-212ENST00000519661 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
SPIDR-212ENST00000519661 PIK3C2GO75747 1445 aa16.97■□□□□ 0.31
SPIDR-212ENST00000519661 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
SPIDR-212ENST00000519661 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.31
SPIDR-212ENST00000519661 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.31
SPIDR-212ENST00000519661 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
SPIDR-212ENST00000519661 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
SPIDR-212ENST00000519661 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
SPIDR-212ENST00000519661 METP08581 1390 aa16.92■□□□□ 0.3
SPIDR-212ENST00000519661 TECPR2O15040 1411 aa16.92■□□□□ 0.3
SPIDR-212ENST00000519661 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
SPIDR-212ENST00000519661 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
SPIDR-212ENST00000519661 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
SPIDR-212ENST00000519661 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
SPIDR-212ENST00000519661 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
SPIDR-212ENST00000519661 LAMC1P11047 1609 aa16.88■□□□□ 0.29
SPIDR-212ENST00000519661 ILDR1Q86SU0 546 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-212ENST00000519661 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
SPIDR-212ENST00000519661 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
SPIDR-212ENST00000519661 DCCP43146 1447 aa16.87■□□□□ 0.29
SPIDR-212ENST00000519661 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
SPIDR-212ENST00000519661 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
SPIDR-212ENST00000519661 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
SPIDR-212ENST00000519661 BCANQ96GW7 911 aa16.84■□□□□ 0.29
SPIDR-212ENST00000519661 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
SPIDR-212ENST00000519661 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
SPIDR-212ENST00000519661 SIRT1Q96EB6 747 aa16.83■□□□□ 0.28
SPIDR-212ENST00000519661 TOM1O60784 492 aa16.82■□□□□ 0.28
SPIDR-212ENST00000519661 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
SPIDR-212ENST00000519661 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
SPIDR-212ENST00000519661 FAM135BQ49AJ0 1406 aa16.81■□□□□ 0.28
SPIDR-212ENST00000519661 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
SPIDR-212ENST00000519661 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
SPIDR-212ENST00000519661 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
SPIDR-212ENST00000519661 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
SPIDR-212ENST00000519661 UBAP1LF5GYI3 381 aa16.79■□□□□ 0.28
SPIDR-212ENST00000519661 C19orf44Q9H6X5 657 aa16.79■□□□□ 0.28
SPIDR-212ENST00000519661 KIAA1210Q9ULL0 1709 aa16.79■□□□□ 0.28
SPIDR-212ENST00000519661 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
SPIDR-212ENST00000519661 MSH6P52701 1360 aa16.78■□□□□ 0.28
SPIDR-212ENST00000519661 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
SPIDR-212ENST00000519661 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-212ENST00000519661 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
SPIDR-212ENST00000519661 CADPS2Q86UW7 1296 aa16.74■□□□□ 0.27
SPIDR-212ENST00000519661 CDC42BPGQ6DT37 1551 aa16.73■□□□□ 0.27
SPIDR-212ENST00000519661 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
SPIDR-212ENST00000519661 L3MBTL2Q969R5 705 aa16.72■□□□□ 0.27
SPIDR-212ENST00000519661 MST1RQ04912 1400 aa16.71■□□□□ 0.27
SPIDR-212ENST00000519661 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
SPIDR-212ENST00000519661 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-212ENST00000519661 SLAIN2Q9P270 581 aa16.7■□□□□ 0.26
SPIDR-212ENST00000519661 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
SPIDR-212ENST00000519661 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
SPIDR-212ENST00000519661 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
SPIDR-212ENST00000519661 GPRASP1Q5JY77 1395 aa16.68■□□□□ 0.26
SPIDR-212ENST00000519661 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
SPIDR-212ENST00000519661 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
SPIDR-212ENST00000519661 ATF3P18847 181 aa16.66■□□□□ 0.26
SPIDR-212ENST00000519661 AHDC1Q5TGY3 1603 aaPredicted RBP16.66■□□□□ 0.26
SPIDR-212ENST00000519661 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
SPIDR-212ENST00000519661 PLEKHH1Q9ULM0 1364 aa16.65■□□□□ 0.26
SPIDR-212ENST00000519661 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
SPIDR-212ENST00000519661 TRPM1Q7Z4N2 1603 aa16.64■□□□□ 0.25
SPIDR-212ENST00000519661 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
SPIDR-212ENST00000519661 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms