RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
PABPC1-212ENST00000519622 HRCP23327 699 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 SAMD7Q7Z3H4 446 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 LRCH3Q96II8 777 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 TSR3Q9UJK0 312 aaKnown RBP7.33□□□□□ -1.24
PABPC1-212ENST00000519622 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 BIVM-ERCC5R4GMW8 1640 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 SOGA1O94964 1423 aa7.33□□□□□ -1.24
PABPC1-212ENST00000519622 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
PABPC1-212ENST00000519622 NUDT18Q6ZVK8 323 aa7.32□□□□□ -1.24
PABPC1-212ENST00000519622 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
PABPC1-212ENST00000519622 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
PABPC1-212ENST00000519622 PADI6Q6TGC4 694 aa7.31□□□□□ -1.24
PABPC1-212ENST00000519622 GPIHBP1Q8IV16 184 aa7.31□□□□□ -1.24
PABPC1-212ENST00000519622 WRNQ14191 1432 aaPredicted RBP eCLIP7.3□□□□□ -1.24
PABPC1-212ENST00000519622 NYAP1Q6ZVC0 841 aa7.3□□□□□ -1.24
PABPC1-212ENST00000519622 TOP2BQ02880 1626 aa7.3□□□□□ -1.24
PABPC1-212ENST00000519622 NUTM2FA1L443 756 aa7.29□□□□□ -1.24
PABPC1-212ENST00000519622 PPP4CP60510 307 aa7.29□□□□□ -1.24
PABPC1-212ENST00000519622 KIF21BO75037 1637 aa7.29□□□□□ -1.24
PABPC1-212ENST00000519622 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
PABPC1-212ENST00000519622 NBPF26B4DH59 902 aa7.28□□□□□ -1.24
PABPC1-212ENST00000519622 GPR37O15354 613 aa7.28□□□□□ -1.24
PABPC1-212ENST00000519622 FAM9AQ8IZU1 332 aaPredicted RBP7.28□□□□□ -1.24
PABPC1-212ENST00000519622 RBM27Q9P2N5 1060 aaKnown RBP7.28□□□□□ -1.24
PABPC1-212ENST00000519622 EEA1Q15075 1411 aa7.27□□□□□ -1.24
PABPC1-212ENST00000519622 KCNC4Q03721 635 aa7.27□□□□□ -1.25
PABPC1-212ENST00000519622 ZC3H15Q8WU90 426 aaKnown RBP7.27□□□□□ -1.25
PABPC1-212ENST00000519622 PCGF6Q9BYE7 350 aa7.27□□□□□ -1.25
PABPC1-212ENST00000519622 EYA1Q99502 592 aa7.26□□□□□ -1.25
PABPC1-212ENST00000519622 RGS20O76081 388 aa7.25□□□□□ -1.25
PABPC1-212ENST00000519622 PTGDRQ13258 359 aa7.25□□□□□ -1.25
PABPC1-212ENST00000519622 TJAP1Q5JTD0 557 aa7.25□□□□□ -1.25
PABPC1-212ENST00000519622 CUX1P39880 1505 aa7.25□□□□□ -1.25
PABPC1-212ENST00000519622 APLP1P51693 650 aa7.24□□□□□ -1.25
PABPC1-212ENST00000519622 SWT1Q5T5J6 900 aaKnown RBP7.24□□□□□ -1.25
PABPC1-212ENST00000519622 CFTRP13569 1480 aa7.24□□□□□ -1.25
PABPC1-212ENST00000519622 TNIKQ9UKE5 1360 aa7.23□□□□□ -1.25
PABPC1-212ENST00000519622 FCHSD2O94868 740 aa7.23□□□□□ -1.25
PABPC1-212ENST00000519622 FAM161AQ3B820 660 aa7.23□□□□□ -1.25
PABPC1-212ENST00000519622 CEP162Q5TB80 1403 aa7.23□□□□□ -1.25
PABPC1-212ENST00000519622 RNF40O75150 1001 aa7.22□□□□□ -1.25
PABPC1-212ENST00000519622 FECHP22830 423 aa7.22□□□□□ -1.25
PABPC1-212ENST00000519622 TRIM26Q12899 539 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-212ENST00000519622 ZNF516Q92618 1163 aa7.22□□□□□ -1.25
PABPC1-212ENST00000519622 MTRQ99707 1265 aa7.22□□□□□ -1.25
PABPC1-212ENST00000519622 GOLGA3Q08378 1498 aa7.22□□□□□ -1.25
PABPC1-212ENST00000519622 ZMYND10O75800 440 aa7.21□□□□□ -1.26
PABPC1-212ENST00000519622 HDGFP51858 240 aaKnown RBP7.2□□□□□ -1.26
PABPC1-212ENST00000519622 HIC1Q14526 733 aa7.2□□□□□ -1.26
PABPC1-212ENST00000519622 GNPATO15228 680 aa7.19□□□□□ -1.26
PABPC1-212ENST00000519622 ADGRG1Q9Y653 693 aa7.19□□□□□ -1.26
PABPC1-212ENST00000519622 CC2D2AQ9P2K1 1620 aa7.19□□□□□ -1.26
PABPC1-212ENST00000519622 PRXQ9BXM0 1461 aa7.18□□□□□ -1.26
PABPC1-212ENST00000519622 CEP164Q9UPV0 1460 aa7.18□□□□□ -1.26
PABPC1-212ENST00000519622 BARGINQ6ZT62 677 aa7.18□□□□□ -1.26
PABPC1-212ENST00000519622 NKX2-3Q8TAU0 364 aa7.18□□□□□ -1.26
PABPC1-212ENST00000519622 IRX2Q9BZI1 471 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-212ENST00000519622 IL21Q9HBE4 155 aa7.18□□□□□ -1.26
PABPC1-212ENST00000519622 RAPGEF2Q9Y4G8 1499 aa7.17□□□□□ -1.26
PABPC1-212ENST00000519622 PPARGC1BQ86YN6 1023 aaKnown RBP7.17□□□□□ -1.26
PABPC1-212ENST00000519622 SLC24A3Q9HC58 644 aa7.17□□□□□ -1.26
PABPC1-212ENST00000519622 ERICH3Q5RHP9 1530 aa7.17□□□□□ -1.26
PABPC1-212ENST00000519622 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
PABPC1-212ENST00000519622 KRI1Q8N9T8 703 aaKnown RBP7.16□□□□□ -1.26
PABPC1-212ENST00000519622 RCCD1A6NED2 376 aa7.15□□□□□ -1.26
PABPC1-212ENST00000519622 COPS2P61201 443 aa7.15□□□□□ -1.26
PABPC1-212ENST00000519622 MAP2K5Q13163 448 aa7.15□□□□□ -1.26
PABPC1-212ENST00000519622 PPP1R18Q6NYC8 613 aa7.15□□□□□ -1.26
PABPC1-212ENST00000519622 TMEM134Q9H6X4 195 aa7.15□□□□□ -1.26
PABPC1-212ENST00000519622 DNAJB2P25686 324 aa7.14□□□□□ -1.27
PABPC1-212ENST00000519622 RBM46Q8TBY0 533 aaKnown RBP7.14□□□□□ -1.27
PABPC1-212ENST00000519622 CCDC102AQ96A19 550 aa7.14□□□□□ -1.27
PABPC1-212ENST00000519622 ARAP1Q96P48 1450 aa7.12□□□□□ -1.27
PABPC1-212ENST00000519622 MINK1Q8N4C8 1332 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-212ENST00000519622 IRF6O14896 467 aa7.11□□□□□ -1.27
PABPC1-212ENST00000519622 SLC10A3P09131 477 aa7.11□□□□□ -1.27
PABPC1-212ENST00000519622 WDR97A6NE52 1622 aa7.11□□□□□ -1.27
PABPC1-212ENST00000519622 CADPSQ9ULU8 1353 aa7.1□□□□□ -1.27
PABPC1-212ENST00000519622 ZPR1O75312 459 aa7.1□□□□□ -1.27
PABPC1-212ENST00000519622 BLOC1S3Q6QNY0 202 aa7.1□□□□□ -1.27
PABPC1-212ENST00000519622 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
PABPC1-212ENST00000519622 PRKD2Q9BZL6 878 aa7.1□□□□□ -1.27
PABPC1-212ENST00000519622 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.1□□□□□ -1.27
PABPC1-212ENST00000519622 VPS8Q8N3P4 1428 aa7.1□□□□□ -1.27
PABPC1-212ENST00000519622 NLRP7Q8WX94 980 aa7.09□□□□□ -1.27
PABPC1-212ENST00000519622 NECTIN2Q92692 538 aa7.09□□□□□ -1.27
PABPC1-212ENST00000519622 AK7Q96M32 723 aa7.09□□□□□ -1.27
PABPC1-212ENST00000519622 PHOX2BQ99453 314 aa7.09□□□□□ -1.27
PABPC1-212ENST00000519622 PCDHB3Q9Y5E6 796 aa7.09□□□□□ -1.27
PABPC1-212ENST00000519622 CLIP1P30622 1438 aa7.09□□□□□ -1.28
PABPC1-212ENST00000519622 TRIM66O15016 1216 aa7.08□□□□□ -1.28
PABPC1-212ENST00000519622 SLC4A3P48751 1232 aa7.08□□□□□ -1.28
PABPC1-212ENST00000519622 METTL3Q86U44 580 aaKnown RBP7.08□□□□□ -1.28
PABPC1-212ENST00000519622 FGD5Q6ZNL6 1462 aa7.08□□□□□ -1.28
PABPC1-212ENST00000519622 DNMBPQ6XZF7 1577 aa7.08□□□□□ -1.28
PABPC1-212ENST00000519622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.07□□□□□ -1.28
PABPC1-212ENST00000519622 LCE2BO14633 110 aa7.07□□□□□ -1.28
PABPC1-212ENST00000519622 ACTN4O43707 911 aaKnown RBP7.07□□□□□ -1.28
PABPC1-212ENST00000519622 TLL1O43897 1013 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms