RNA–Protein interactions for RNA: ENST00000519604.5

ARFGAP1-212, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-212ENST00000519604 ADGRL2O95490 1459 aa18.22■□□□□ 0.51
ARFGAP1-212ENST00000519604 PDCL3Q9H2J4 239 aa18.22■□□□□ 0.51
ARFGAP1-212ENST00000519604 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
ARFGAP1-212ENST00000519604 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
ARFGAP1-212ENST00000519604 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.51
ARFGAP1-212ENST00000519604 SEC24BO95487 1268 aa18.2■□□□□ 0.5
ARFGAP1-212ENST00000519604 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
ARFGAP1-212ENST00000519604 PANK3Q9H999 370 aa18.19■□□□□ 0.5
ARFGAP1-212ENST00000519604 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
ARFGAP1-212ENST00000519604 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
ARFGAP1-212ENST00000519604 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
ARFGAP1-212ENST00000519604 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
ARFGAP1-212ENST00000519604 GZF1Q9H116 711 aaPredicted RBP18.18■□□□□ 0.5
ARFGAP1-212ENST00000519604 NUP155O75694 1391 aa18.18■□□□□ 0.5
ARFGAP1-212ENST00000519604 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
ARFGAP1-212ENST00000519604 SPRYD3Q8NCJ5 442 aa18.16■□□□□ 0.5
ARFGAP1-212ENST00000519604 PTPRGP23470 1445 aa18.16■□□□□ 0.5
ARFGAP1-212ENST00000519604 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
ARFGAP1-212ENST00000519604 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
ARFGAP1-212ENST00000519604 USP19O94966 1318 aa18.15■□□□□ 0.5
ARFGAP1-212ENST00000519604 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.5
ARFGAP1-212ENST00000519604 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
ARFGAP1-212ENST00000519604 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.14■□□□□ 0.49
ARFGAP1-212ENST00000519604 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
ARFGAP1-212ENST00000519604 IGHDP01880 384 aa18.13■□□□□ 0.49
ARFGAP1-212ENST00000519604 BCAR3O75815 825 aa18.13■□□□□ 0.49
ARFGAP1-212ENST00000519604 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.496e-7■■■□□ 17.1
ARFGAP1-212ENST00000519604 L1TD1Q5T7N2 865 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-212ENST00000519604 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
ARFGAP1-212ENST00000519604 TEX2Q8IWB9 1127 aa18.12■□□□□ 0.49
ARFGAP1-212ENST00000519604 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
ARFGAP1-212ENST00000519604 BECN1Q14457 450 aa18.11■□□□□ 0.49
ARFGAP1-212ENST00000519604 ARID3AQ99856 593 aa18.11■□□□□ 0.49
ARFGAP1-212ENST00000519604 ANKRD30AQ9BXX3 1397 aa18.11■□□□□ 0.49
ARFGAP1-212ENST00000519604 XRCC6P12956 609 aaKnown RBP eCLIP18.1■□□□□ 0.495e-6■■□□□ 11.5
ARFGAP1-212ENST00000519604 ANKRD50Q9ULJ7 1429 aa18.1■□□□□ 0.49
ARFGAP1-212ENST00000519604 DISP3Q9P2K9 1392 aa18.1■□□□□ 0.49
ARFGAP1-212ENST00000519604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.492e-6■■□□□ 14.4
ARFGAP1-212ENST00000519604 CENPJQ9HC77 1338 aaPredicted RBP18.09■□□□□ 0.49
ARFGAP1-212ENST00000519604 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
ARFGAP1-212ENST00000519604 PRDM10Q9NQV6 1147 aa18.09■□□□□ 0.49
ARFGAP1-212ENST00000519604 TMEM51Q9NW97 253 aa18.09■□□□□ 0.49
ARFGAP1-212ENST00000519604 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
ARFGAP1-212ENST00000519604 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.49
ARFGAP1-212ENST00000519604 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
ARFGAP1-212ENST00000519604 CNPY4Q8N129 248 aa18.07■□□□□ 0.48
ARFGAP1-212ENST00000519604 PREX2Q70Z35 1606 aa18.07■□□□□ 0.48
ARFGAP1-212ENST00000519604 GOLGA6L3A6NEY3 463 aa18.07■□□□□ 0.48
ARFGAP1-212ENST00000519604 E9PCH4 1651 aa18.07■□□□□ 0.48
ARFGAP1-212ENST00000519604 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
ARFGAP1-212ENST00000519604 CDC42BPBQ9Y5S2 1711 aa18.05■□□□□ 0.48
ARFGAP1-212ENST00000519604 NCLP19338 710 aaKnown RBP18.04■□□□□ 0.48
ARFGAP1-212ENST00000519604 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
ARFGAP1-212ENST00000519604 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
ARFGAP1-212ENST00000519604 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
ARFGAP1-212ENST00000519604 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
ARFGAP1-212ENST00000519604 TESK2Q96S53 571 aa18.03■□□□□ 0.48
ARFGAP1-212ENST00000519604 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
ARFGAP1-212ENST00000519604 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
ARFGAP1-212ENST00000519604 CLCN1P35523 988 aa18.02■□□□□ 0.48
ARFGAP1-212ENST00000519604 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
ARFGAP1-212ENST00000519604 ABCC2Q92887 1545 aa18.02■□□□□ 0.48
ARFGAP1-212ENST00000519604 KDM5DQ9BY66 1539 aa18.02■□□□□ 0.48
ARFGAP1-212ENST00000519604 TBC1D2Q9BYX2 928 aa18.01■□□□□ 0.47
ARFGAP1-212ENST00000519604 ANP32BQ92688 251 aaKnown RBP18.01■□□□□ 0.47
ARFGAP1-212ENST00000519604 APAF1O14727 1248 aa18.01■□□□□ 0.47
ARFGAP1-212ENST00000519604 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
ARFGAP1-212ENST00000519604 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
ARFGAP1-212ENST00000519604 ZNF521Q96K83 1311 aa18■□□□□ 0.47
ARFGAP1-212ENST00000519604 E9PSI1 815 aa18■□□□□ 0.47
ARFGAP1-212ENST00000519604 KCNG1Q9UIX4 513 aa18■□□□□ 0.47
ARFGAP1-212ENST00000519604 CLASP1Q7Z460 1538 aa18■□□□□ 0.47
ARFGAP1-212ENST00000519604 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
ARFGAP1-212ENST00000519604 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
ARFGAP1-212ENST00000519604 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.475e-16■■■□□ 15.4
ARFGAP1-212ENST00000519604 TMF1P82094 1093 aa17.99■□□□□ 0.47
ARFGAP1-212ENST00000519604 CCDC141Q6ZP82 1450 aa17.98■□□□□ 0.47
ARFGAP1-212ENST00000519604 UPF2Q9HAU5 1272 aaKnown RBP17.98■□□□□ 0.47
ARFGAP1-212ENST00000519604 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
ARFGAP1-212ENST00000519604 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
ARFGAP1-212ENST00000519604 TTC37Q6PGP7 1564 aa17.97■□□□□ 0.47
ARFGAP1-212ENST00000519604 EIF3AQ14152 1382 aaKnown RBP17.97■□□□□ 0.47
ARFGAP1-212ENST00000519604 MCM4P33991 863 aa17.97■□□□□ 0.47
ARFGAP1-212ENST00000519604 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
ARFGAP1-212ENST00000519604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■□□□□ 10.3
ARFGAP1-212ENST00000519604 CHRM1P11229 460 aaPredicted RBP17.96■□□□□ 0.47
ARFGAP1-212ENST00000519604 CLUAP1Q96AJ1 413 aa17.96■□□□□ 0.47
ARFGAP1-212ENST00000519604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.475e-11■□□□□ 11.1
ARFGAP1-212ENST00000519604 PRAG1Q86YV5 1406 aa17.96■□□□□ 0.47
ARFGAP1-212ENST00000519604 BCCIPQ9P287 314 aaKnown RBP eCLIP17.96■□□□□ 0.47
ARFGAP1-212ENST00000519604 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.47
ARFGAP1-212ENST00000519604 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
ARFGAP1-212ENST00000519604 INSRP06213 1382 aa17.96■□□□□ 0.46
ARFGAP1-212ENST00000519604 FSD2A1L4K1 749 aa17.95■□□□□ 0.46
ARFGAP1-212ENST00000519604 PPP4R3BQ5MIZ7 849 aa17.95■□□□□ 0.46
ARFGAP1-212ENST00000519604 ERBINQ96RT1 1412 aa17.95■□□□□ 0.46
ARFGAP1-212ENST00000519604 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
ARFGAP1-212ENST00000519604 MYO5CQ9NQX4 1742 aa17.94■□□□□ 0.46
ARFGAP1-212ENST00000519604 TRAK2O60296 914 aa17.94■□□□□ 0.46
ARFGAP1-212ENST00000519604 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms