RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
PABPC1-211ENST00000519596 ZNF598Q86UK7 904 aaKnown RBP6.28□□□□□ -1.4
PABPC1-211ENST00000519596 CDHR5Q9HBB8 845 aa6.28□□□□□ -1.4
PABPC1-211ENST00000519596 TNFRSF10AO00220 468 aa6.27□□□□□ -1.41
PABPC1-211ENST00000519596 LIAT1Q6ZQX7 453 aa6.27□□□□□ -1.41
PABPC1-211ENST00000519596 PPEF1O14829 653 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-211ENST00000519596 TLL1O43897 1013 aa6.26□□□□□ -1.41
PABPC1-211ENST00000519596 GDF9O60383 454 aa6.26□□□□□ -1.41
PABPC1-211ENST00000519596 ZNF697Q5TEC3 545 aa6.26□□□□□ -1.41
PABPC1-211ENST00000519596 AAASQ9NRG9 546 aa6.26□□□□□ -1.41
PABPC1-211ENST00000519596 BLOC1S3Q6QNY0 202 aa6.25□□□□□ -1.41
PABPC1-211ENST00000519596 SLF2Q8IX21 1173 aa6.25□□□□□ -1.41
PABPC1-211ENST00000519596 GRXCR2A6NFK2 248 aa6.24□□□□□ -1.41
PABPC1-211ENST00000519596 ANKLE1Q8NAG6 615 aa6.24□□□□□ -1.41
PABPC1-211ENST00000519596 NECTIN2Q92692 538 aa6.24□□□□□ -1.41
PABPC1-211ENST00000519596 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
PABPC1-211ENST00000519596 TTC13Q8NBP0 860 aa6.23□□□□□ -1.41
PABPC1-211ENST00000519596 RBM27Q9P2N5 1060 aaKnown RBP6.23□□□□□ -1.41
PABPC1-211ENST00000519596 DACH1Q9UI36 760 aa6.23□□□□□ -1.41
PABPC1-211ENST00000519596 ARIH1Q9Y4X5 557 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-211ENST00000519596 S1PR4O95977 384 aa6.22□□□□□ -1.41
PABPC1-211ENST00000519596 WFS1O76024 890 aa6.21□□□□□ -1.42
PABPC1-211ENST00000519596 OSBPP22059 807 aa6.21□□□□□ -1.42
PABPC1-211ENST00000519596 PADI6Q6TGC4 694 aa6.21□□□□□ -1.42
PABPC1-211ENST00000519596 STK17AQ9UEE5 414 aa6.21□□□□□ -1.42
PABPC1-211ENST00000519596 PLA2G2CQ5R387 149 aa6.2□□□□□ -1.42
PABPC1-211ENST00000519596 NFX1Q12986 1120 aaKnown RBP6.19□□□□□ -1.42
PABPC1-211ENST00000519596 EYA1Q99502 592 aa6.19□□□□□ -1.42
PABPC1-211ENST00000519596 PRR14Q9BWN1 585 aa6.19□□□□□ -1.42
PABPC1-211ENST00000519596 NPDC1Q9NQX5 325 aaPredicted RBP6.19□□□□□ -1.42
PABPC1-211ENST00000519596 PKD2L1Q9P0L9 805 aa6.18□□□□□ -1.42
PABPC1-211ENST00000519596 GMPR2Q9P2T1 348 aaKnown RBP6.18□□□□□ -1.42
PABPC1-211ENST00000519596 WIPF1O43516 503 aa6.17□□□□□ -1.42
PABPC1-211ENST00000519596 SLC4A3P48751 1232 aa6.17□□□□□ -1.42
PABPC1-211ENST00000519596 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
PABPC1-211ENST00000519596 CRIPAKQ8N1N5 446 aa6.17□□□□□ -1.42
PABPC1-211ENST00000519596 FOXC1Q12948 553 aa6.16□□□□□ -1.42
PABPC1-211ENST00000519596 C11orf95C9JLR9 678 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-211ENST00000519596 ADH1BP00325 375 aa6.15□□□□□ -1.42
PABPC1-211ENST00000519596 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.42
PABPC1-211ENST00000519596 TSHZ2Q9NRE2 1034 aa6.15□□□□□ -1.42
PABPC1-211ENST00000519596 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
PABPC1-211ENST00000519596 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
PABPC1-211ENST00000519596 AVPP01185 164 aa6.14□□□□□ -1.43
PABPC1-211ENST00000519596 INSM1Q01101 510 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-211ENST00000519596 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
PABPC1-211ENST00000519596 P3H3Q8IVL6 736 aa6.13□□□□□ -1.43
PABPC1-211ENST00000519596 SLC6A16Q9GZN6 736 aa6.13□□□□□ -1.43
PABPC1-211ENST00000519596 AXIN1O15169 862 aa6.12□□□□□ -1.43
PABPC1-211ENST00000519596 LMOD2Q6P5Q4 547 aa6.12□□□□□ -1.43
PABPC1-211ENST00000519596 TOR4AQ9NXH8 423 aa6.12□□□□□ -1.43
PABPC1-211ENST00000519596 CFHP08603 1231 aa6.11□□□□□ -1.43
PABPC1-211ENST00000519596 KMT5BQ4FZB7 885 aa6.11□□□□□ -1.43
PABPC1-211ENST00000519596 DNAJB2P25686 324 aa6.1□□□□□ -1.43
PABPC1-211ENST00000519596 KCNV2Q8TDN2 545 aa6.1□□□□□ -1.43
PABPC1-211ENST00000519596 TMEM134Q9H6X4 195 aa6.1□□□□□ -1.43
PABPC1-211ENST00000519596 NR1I2O75469 434 aa6.09□□□□□ -1.43
PABPC1-211ENST00000519596 SLC10A3P09131 477 aa6.08□□□□□ -1.44
PABPC1-211ENST00000519596 SNRPBP14678 240 aaKnown RBP6.08□□□□□ -1.44
PABPC1-211ENST00000519596 SMCPP49901 116 aaPredicted RBP6.08□□□□□ -1.44
PABPC1-211ENST00000519596 CTC1Q2NKJ3 1217 aa6.08□□□□□ -1.44
PABPC1-211ENST00000519596 CYP4X1Q8N118 509 aa6.08□□□□□ -1.44
PABPC1-211ENST00000519596 NUTM2FA1L443 756 aa6.07□□□□□ -1.44
PABPC1-211ENST00000519596 TERTO14746 1132 aaKnown RBP6.07□□□□□ -1.44
PABPC1-211ENST00000519596 MLLT3P42568 568 aaPredicted RBP6.07□□□□□ -1.44
PABPC1-211ENST00000519596 RPIAP49247 311 aa6.07□□□□□ -1.44
PABPC1-211ENST00000519596 SCUBE3Q8IX30 993 aa6.07□□□□□ -1.44
PABPC1-211ENST00000519596 RCCD1A6NED2 376 aa6.06□□□□□ -1.44
PABPC1-211ENST00000519596 ADGRG1Q9Y653 693 aa6.06□□□□□ -1.44
PABPC1-211ENST00000519596 FAM161AQ3B820 660 aa6.05□□□□□ -1.44
PABPC1-211ENST00000519596 PUS10Q3MIT2 529 aaKnown RBP6.05□□□□□ -1.44
PABPC1-211ENST00000519596 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
PABPC1-211ENST00000519596 SPSB2Q99619 263 aa6.05□□□□□ -1.44
PABPC1-211ENST00000519596 PTGDRQ13258 359 aa6.04□□□□□ -1.44
PABPC1-211ENST00000519596 SMYD5Q6GMV2 418 aa6.04□□□□□ -1.44
PABPC1-211ENST00000519596 ATP13A2Q9NQ11 1180 aa6.04□□□□□ -1.44
PABPC1-211ENST00000519596 FCF1Q9Y324 198 aaKnown RBP6.04□□□□□ -1.44
PABPC1-211ENST00000519596 FCHSD2O94868 740 aa6.03□□□□□ -1.44
PABPC1-211ENST00000519596 CD2BP2O95400 341 aaKnown RBP6.03□□□□□ -1.44
PABPC1-211ENST00000519596 PLCB2Q00722 1185 aa6.03□□□□□ -1.44
PABPC1-211ENST00000519596 TTC24A2A3L6 582 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-211ENST00000519596 SMPD1P17405 629 aa6.02□□□□□ -1.45
PABPC1-211ENST00000519596 TRIM47Q96LD4 638 aa6.02□□□□□ -1.45
PABPC1-211ENST00000519596 SEMA3EO15041 775 aa6.01□□□□□ -1.45
PABPC1-211ENST00000519596 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
PABPC1-211ENST00000519596 RSPH4AQ5TD94 716 aa6□□□□□ -1.45
PABPC1-211ENST00000519596 OATP04181 439 aa5.99□□□□□ -1.45
PABPC1-211ENST00000519596 HAP1P54257 671 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-211ENST00000519596 FAM160A2Q8N612 972 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-211ENST00000519596 THAP11Q96EK4 314 aa5.99□□□□□ -1.45
PABPC1-211ENST00000519596 SENP2Q9HC62 589 aa5.99□□□□□ -1.45
PABPC1-211ENST00000519596 J3QL48 77 aa5.98□□□□□ -1.45
PABPC1-211ENST00000519596 PRDM9Q9NQV7 894 aa5.98□□□□□ -1.45
PABPC1-211ENST00000519596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.97□□□□□ -1.45
PABPC1-211ENST00000519596 FAM181BA6NEQ2 426 aa5.97□□□□□ -1.45
PABPC1-211ENST00000519596 WNT7AO00755 349 aa5.97□□□□□ -1.45
PABPC1-211ENST00000519596 GMPRP36959 345 aa5.97□□□□□ -1.45
PABPC1-211ENST00000519596 HIC1Q14526 733 aa5.97□□□□□ -1.45
PABPC1-211ENST00000519596 SNIP1Q8TAD8 396 aaKnown RBP5.97□□□□□ -1.45
PABPC1-211ENST00000519596 HPS1Q92902 700 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms