RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 ALKQ9UM73 1620 aa32.14■■■□□ 2.74
ARFGEF1-206ENST00000519436 HFM1A2PYH4 1435 aa32.13■■■□□ 2.73
ARFGEF1-206ENST00000519436 PLEKHG1Q9ULL1 1385 aa32.12■■■□□ 2.73
ARFGEF1-206ENST00000519436 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.1■■■□□ 2.73
ARFGEF1-206ENST00000519436 MYO5BQ9ULV0 1848 aa32.07■■■□□ 2.73
ARFGEF1-206ENST00000519436 SCAF1Q9H7N4 1312 aaKnown RBP32.07■■■□□ 2.72
ARFGEF1-206ENST00000519436 HSPA1LP34931 641 aa32.07■■■□□ 2.72
ARFGEF1-206ENST00000519436 BCANQ96GW7 911 aa32.07■■■□□ 2.72
ARFGEF1-206ENST00000519436 PPP1R15AO75807 674 aaPredicted RBP32.06■■■□□ 2.72
ARFGEF1-206ENST00000519436 SENP3Q9H4L4 574 aaPredicted RBP32.05■■■□□ 2.72
ARFGEF1-206ENST00000519436 TBX22Q9Y458 520 aa32.05■■■□□ 2.72
ARFGEF1-206ENST00000519436 NUTM2DQ5VT03 806 aaPredicted RBP32.03■■■□□ 2.72
ARFGEF1-206ENST00000519436 TMEM94Q12767 1356 aa32.02■■■□□ 2.72
ARFGEF1-206ENST00000519436 PROSER2Q86WR7 435 aaPredicted RBP32■■■□□ 2.71
ARFGEF1-206ENST00000519436 TRIM52Q96A61 297 aa32■■■□□ 2.71
ARFGEF1-206ENST00000519436 ADAMTS13Q76LX8 1427 aa31.99■■■□□ 2.71
ARFGEF1-206ENST00000519436 DISP3Q9P2K9 1392 aa31.98■■■□□ 2.71
ARFGEF1-206ENST00000519436 XIRP1Q702N8 1843 aaKnown RBP31.97■■■□□ 2.71
ARFGEF1-206ENST00000519436 NWD1Q149M9 1564 aa31.96■■■□□ 2.71
ARFGEF1-206ENST00000519436 RBM33Q96EV2 1170 aaKnown RBP31.96■■■□□ 2.71
ARFGEF1-206ENST00000519436 SPHKAPQ2M3C7 1700 aa31.95■■■□□ 2.71
ARFGEF1-206ENST00000519436 NKTRP30414 1462 aaKnown RBP31.94■■■□□ 2.7
ARFGEF1-206ENST00000519436 SLC4A1APQ9BWU0 796 aaKnown RBP31.92■■■□□ 2.7
ARFGEF1-206ENST00000519436 TRPM2O94759 1503 aa31.91■■■□□ 2.7
ARFGEF1-206ENST00000519436 ZNF326Q5BKZ1 582 aaKnown RBP31.88■■■□□ 2.69
ARFGEF1-206ENST00000519436 PIK3R4Q99570 1358 aa31.88■■■□□ 2.69
ARFGEF1-206ENST00000519436 CLTCL1P53675 1640 aa31.87■■■□□ 2.69
ARFGEF1-206ENST00000519436 CHD2O14647 1828 aaKnown RBP31.86■■■□□ 2.69
ARFGEF1-206ENST00000519436 ILDR2Q71H61 639 aa31.85■■■□□ 2.69
ARFGEF1-206ENST00000519436 FAM135BQ49AJ0 1406 aa31.84■■■□□ 2.69
ARFGEF1-206ENST00000519436 DIP2AQ14689 1571 aa31.84■■■□□ 2.69
ARFGEF1-206ENST00000519436 PTPRUQ92729 1446 aa31.81■■■□□ 2.68
ARFGEF1-206ENST00000519436 AMOTL2Q9Y2J4 779 aa31.8■■■□□ 2.68
ARFGEF1-206ENST00000519436 NCOA3Q9Y6Q9 1424 aa31.8■■■□□ 2.68
ARFGEF1-206ENST00000519436 FOXD1Q16676 465 aa31.79■■■□□ 2.68
ARFGEF1-206ENST00000519436 MSH6P52701 1360 aa31.79■■■□□ 2.68
ARFGEF1-206ENST00000519436 MPHOSPH9Q99550 1183 aa31.78■■■□□ 2.68
ARFGEF1-206ENST00000519436 NEXMIFQ5QGS0 1516 aa31.78■■■□□ 2.68
ARFGEF1-206ENST00000519436 SETBP1Q9Y6X0 1596 aa31.77■■■□□ 2.68
ARFGEF1-206ENST00000519436 NRXN3Q9Y4C0 1643 aa31.77■■■□□ 2.68
ARFGEF1-206ENST00000519436 SLAIN2Q9P270 581 aa31.74■■■□□ 2.67
ARFGEF1-206ENST00000519436 METP08581 1390 aa31.73■■■□□ 2.67
ARFGEF1-206ENST00000519436 RPGRIP1LQ68CZ1 1315 aa31.72■■■□□ 2.67
ARFGEF1-206ENST00000519436 SETD5Q9C0A6 1442 aa31.7■■■□□ 2.67
ARFGEF1-206ENST00000519436 VGFO15240 615 aaPredicted RBP31.7■■■□□ 2.67
ARFGEF1-206ENST00000519436 C19orf44Q9H6X5 657 aa31.7■■■□□ 2.67
ARFGEF1-206ENST00000519436 KIF1BO60333 1816 aa31.68■■■□□ 2.66
ARFGEF1-206ENST00000519436 ACIN1Q9UKV3 1341 aaKnown RBP31.68■■■□□ 2.66
ARFGEF1-206ENST00000519436 MED1Q15648 1581 aaPredicted RBP31.66■■■□□ 2.66
ARFGEF1-206ENST00000519436 C14orf37Q86TY3 774 aa31.65■■■□□ 2.66
ARFGEF1-206ENST00000519436 CADPS2Q86UW7 1296 aa31.63■■■□□ 2.65
ARFGEF1-206ENST00000519436 ROBO1Q9Y6N7 1651 aa31.62■■■□□ 2.65
ARFGEF1-206ENST00000519436 XRN1Q8IZH2 1706 aaKnown RBP31.61■■■□□ 2.65
ARFGEF1-206ENST00000519436 CCDC144AA2RUR9 1427 aa31.6■■■□□ 2.65
ARFGEF1-206ENST00000519436 SPATA31E1Q6ZUB1 1445 aa31.59■■■□□ 2.65
ARFGEF1-206ENST00000519436 ATF3P18847 181 aa31.59■■■□□ 2.65
ARFGEF1-206ENST00000519436 RAB3GAP2Q9H2M9 1393 aa31.58■■■□□ 2.65
ARFGEF1-206ENST00000519436 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.56■■■□□ 2.64
ARFGEF1-206ENST00000519436 RGL3Q3MIN7 710 aa31.55■■■□□ 2.64
ARFGEF1-206ENST00000519436 SOCS7O14512 581 aa31.54■■■□□ 2.64
ARFGEF1-206ENST00000519436 ADGRF5Q8IZF2 1346 aa31.52■■■□□ 2.64
ARFGEF1-206ENST00000519436 DCCP43146 1447 aa31.52■■■□□ 2.64
ARFGEF1-206ENST00000519436 PPLO60437 1756 aa31.5■■■□□ 2.63
ARFGEF1-206ENST00000519436 SETD1AO15047 1707 aaKnown RBP31.49■■■□□ 2.63
ARFGEF1-206ENST00000519436 PRAG1Q86YV5 1406 aa31.48■■■□□ 2.63
ARFGEF1-206ENST00000519436 ANKRD30BQ9BXX2 1392 aa31.47■■■□□ 2.63
ARFGEF1-206ENST00000519436 ROBO2Q9HCK4 1378 aa31.47■■■□□ 2.63
ARFGEF1-206ENST00000519436 HRCP23327 699 aa31.47■■■□□ 2.63
ARFGEF1-206ENST00000519436 BRINP3Q76B58 766 aa31.47■■■□□ 2.63
ARFGEF1-206ENST00000519436 PTCH1Q13635 1447 aa31.46■■■□□ 2.63
ARFGEF1-206ENST00000519436 ADGRL3Q9HAR2 1447 aa31.46■■■□□ 2.63
ARFGEF1-206ENST00000519436 PHF23Q9BUL5 403 aaPredicted RBP31.45■■■□□ 2.63
ARFGEF1-206ENST00000519436 RGS17Q9UGC6 210 aaPredicted RBP31.44■■■□□ 2.62
ARFGEF1-206ENST00000519436 MST1RQ04912 1400 aa31.43■■■□□ 2.62
ARFGEF1-206ENST00000519436 JCADQ9P266 1359 aa31.41■■■□□ 2.62
ARFGEF1-206ENST00000519436 COL16A1Q07092 1604 aaPredicted RBP31.38■■■□□ 2.61
ARFGEF1-206ENST00000519436 PHLPP1O60346 1717 aa31.38■■■□□ 2.61
ARFGEF1-206ENST00000519436 AHDC1Q5TGY3 1603 aaPredicted RBP31.38■■■□□ 2.61
ARFGEF1-206ENST00000519436 PIK3C2GO75747 1445 aa31.36■■■□□ 2.61
ARFGEF1-206ENST00000519436 IFT172Q9UG01 1749 aa31.35■■■□□ 2.61
ARFGEF1-206ENST00000519436 NALCNQ8IZF0 1738 aa31.32■■■□□ 2.61
ARFGEF1-206ENST00000519436 TMEM132EQ6IEE7 984 aa31.32■■■□□ 2.6
ARFGEF1-206ENST00000519436 ASXL1Q8IXJ9 1541 aa31.32■■■□□ 2.6
ARFGEF1-206ENST00000519436 LRPPRCP42704 1394 aaKnown RBP31.31■■■□□ 2.6
ARFGEF1-206ENST00000519436 C14orf93Q9H972 538 aaKnown RBP31.31■■■□□ 2.6
ARFGEF1-206ENST00000519436 TECPR2O15040 1411 aa31.31■■■□□ 2.6
ARFGEF1-206ENST00000519436 ABCC11Q96J66 1382 aa31.3■■■□□ 2.6
ARFGEF1-206ENST00000519436 NRXN1Q9ULB1 1477 aa31.3■■■□□ 2.6
ARFGEF1-206ENST00000519436 C1orf167Q5SNV9 1468 aa31.29■■■□□ 2.6
ARFGEF1-206ENST00000519436 STK26Q9P289 416 aa31.29■■■□□ 2.6
ARFGEF1-206ENST00000519436 WAPLQ7Z5K2 1190 aa31.27■■■□□ 2.6
ARFGEF1-206ENST00000519436 SPATA31A6Q5VVP1 1343 aa31.26■■■□□ 2.6
ARFGEF1-206ENST00000519436 CFAP70Q5T0N1 1121 aa31.25■■■□□ 2.59
ARFGEF1-206ENST00000519436 DDX17Q92841 729 aaKnown RBP31.25■■■□□ 2.59
ARFGEF1-206ENST00000519436 MYOM2P54296 1465 aa31.25■■■□□ 2.59
ARFGEF1-206ENST00000519436 ORAI2Q96SN7 254 aa31.24■■■□□ 2.59
ARFGEF1-206ENST00000519436 POTEAQ6S8J7 498 aa31.23■■■□□ 2.59
ARFGEF1-206ENST00000519436 SIRT1Q96EB6 747 aa31.23■■■□□ 2.59
ARFGEF1-206ENST00000519436 YTHDC2Q9H6S0 1430 aaKnown RBP31.22■■■□□ 2.59
ARFGEF1-206ENST00000519436 LRRC59Q96AG4 307 aaKnown RBP31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms