RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 IQGAP3Q86VI3 1631 aa10.51□□□□□ -0.73
MRPS28-205ENST00000519386 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
MRPS28-205ENST00000519386 NUP155O75694 1391 aa10.5□□□□□ -0.73
MRPS28-205ENST00000519386 FBXO31Q5XUX0 539 aaPredicted RBP10.49□□□□□ -0.73
MRPS28-205ENST00000519386 TET3O43151 1660 aa10.49□□□□□ -0.73
MRPS28-205ENST00000519386 NPATQ14207 1427 aa10.49□□□□□ -0.73
MRPS28-205ENST00000519386 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
MRPS28-205ENST00000519386 ARHGAP31Q2M1Z3 1444 aa10.48□□□□□ -0.73
MRPS28-205ENST00000519386 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
MRPS28-205ENST00000519386 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
MRPS28-205ENST00000519386 ERVK-7P63135 1459 aa10.47□□□□□ -0.73
MRPS28-205ENST00000519386 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
MRPS28-205ENST00000519386 TNRQ92752 1358 aa10.46□□□□□ -0.74
MRPS28-205ENST00000519386 E9PCH4 1651 aa10.46□□□□□ -0.74
MRPS28-205ENST00000519386 MYO3AQ8NEV4 1616 aa10.45□□□□□ -0.74
MRPS28-205ENST00000519386 SPATA31D1Q6ZQQ2 1576 aa10.45□□□□□ -0.74
MRPS28-205ENST00000519386 RPRD2Q5VT52 1461 aaKnown RBP10.45□□□□□ -0.74
MRPS28-205ENST00000519386 LMTK3Q96Q04 1460 aa10.45□□□□□ -0.74
MRPS28-205ENST00000519386 UHRF1BP1Q6BDS2 1440 aa10.45□□□□□ -0.74
MRPS28-205ENST00000519386 ZNF142P52746 1687 aaPredicted RBP10.43□□□□□ -0.74
MRPS28-205ENST00000519386 SYNMO15061 1565 aa10.43□□□□□ -0.74
MRPS28-205ENST00000519386 NOS1P29475 1434 aa10.42□□□□□ -0.74
MRPS28-205ENST00000519386 HSPA2P54652 639 aa10.42□□□□□ -0.74
MRPS28-205ENST00000519386 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
MRPS28-205ENST00000519386 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
MRPS28-205ENST00000519386 TONSLQ96HA7 1378 aa10.41□□□□□ -0.74
MRPS28-205ENST00000519386 ANKRD30BQ9BXX2 1392 aa10.41□□□□□ -0.74
MRPS28-205ENST00000519386 MPHOSPH9Q99550 1183 aa10.41□□□□□ -0.74
MRPS28-205ENST00000519386 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
MRPS28-205ENST00000519386 PKD2Q13563 968 aa10.4□□□□□ -0.74
MRPS28-205ENST00000519386 CREBZFQ9NS37 354 aa10.4□□□□□ -0.74
MRPS28-205ENST00000519386 POLR1AO95602 1720 aaPredicted RBP10.4□□□□□ -0.74
MRPS28-205ENST00000519386 SPHKAPQ2M3C7 1700 aa10.39□□□□□ -0.75
MRPS28-205ENST00000519386 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
MRPS28-205ENST00000519386 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
MRPS28-205ENST00000519386 PIK3C2BO00750 1634 aa10.38□□□□□ -0.75
MRPS28-205ENST00000519386 IDI1Q13907 227 aa10.38□□□□□ -0.75
MRPS28-205ENST00000519386 PTPRTO14522 1441 aa10.38□□□□□ -0.75
MRPS28-205ENST00000519386 UBR1Q8IWV7 1749 aa10.37□□□□□ -0.75
MRPS28-205ENST00000519386 NEURL4Q96JN8 1562 aa10.37□□□□□ -0.75
MRPS28-205ENST00000519386 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
MRPS28-205ENST00000519386 SLC52A1Q9NWF4 448 aa10.36□□□□□ -0.75
MRPS28-205ENST00000519386 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
MRPS28-205ENST00000519386 STRCQ7RTU9 1775 aa10.35□□□□□ -0.75
MRPS28-205ENST00000519386 TRPM2O94759 1503 aa10.35□□□□□ -0.75
MRPS28-205ENST00000519386 HAX1O00165 279 aa10.35□□□□□ -0.75
MRPS28-205ENST00000519386 FARP1Q9Y4F1 1045 aaPredicted RBP10.35□□□□□ -0.75
MRPS28-205ENST00000519386 CLTCL1P53675 1640 aa10.35□□□□□ -0.75
MRPS28-205ENST00000519386 ADGRB3O60242 1522 aa10.34□□□□□ -0.75
MRPS28-205ENST00000519386 PPP1R15AO75807 674 aaPredicted RBP10.34□□□□□ -0.75
MRPS28-205ENST00000519386 SIN3AQ96ST3 1273 aa10.34□□□□□ -0.75
MRPS28-205ENST00000519386 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
MRPS28-205ENST00000519386 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
MRPS28-205ENST00000519386 TMEM131LA2VDJ0 1609 aa10.33□□□□□ -0.76
MRPS28-205ENST00000519386 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
MRPS28-205ENST00000519386 LAMC1P11047 1609 aa10.32□□□□□ -0.76
MRPS28-205ENST00000519386 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
MRPS28-205ENST00000519386 ARHGAP23Q9P227 1491 aa10.31□□□□□ -0.76
MRPS28-205ENST00000519386 SLIT1O75093 1534 aa10.31□□□□□ -0.76
MRPS28-205ENST00000519386 KIF1BO60333 1816 aa10.3□□□□□ -0.76
MRPS28-205ENST00000519386 TMEM2Q9UHN6 1383 aa10.3□□□□□ -0.76
MRPS28-205ENST00000519386 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
MRPS28-205ENST00000519386 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
MRPS28-205ENST00000519386 LTKP29376 864 aa10.29□□□□□ -0.76
MRPS28-205ENST00000519386 EVX2Q03828 476 aa10.29□□□□□ -0.76
MRPS28-205ENST00000519386 ANKLE2Q86XL3 938 aa10.29□□□□□ -0.76
MRPS28-205ENST00000519386 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
MRPS28-205ENST00000519386 SCAF11Q99590 1463 aaKnown RBP10.29□□□□□ -0.76
MRPS28-205ENST00000519386 ZFYVE9O95405 1425 aa10.28□□□□□ -0.76
MRPS28-205ENST00000519386 RIMS2Q9UQ26 1411 aa10.28□□□□□ -0.76
MRPS28-205ENST00000519386 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
MRPS28-205ENST00000519386 DIEXFQ68CQ4 756 aaKnown RBP10.28□□□□□ -0.76
MRPS28-205ENST00000519386 RALGAPBQ86X10 1494 aa10.28□□□□□ -0.76
MRPS28-205ENST00000519386 TRPM1Q7Z4N2 1603 aa10.27□□□□□ -0.77
MRPS28-205ENST00000519386 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.77
MRPS28-205ENST00000519386 EID1Q9Y6B2 187 aa10.27□□□□□ -0.77
MRPS28-205ENST00000519386 IFT172Q9UG01 1749 aa10.27□□□□□ -0.77
MRPS28-205ENST00000519386 NPHP4O75161 1426 aaPredicted RBP10.26□□□□□ -0.77
MRPS28-205ENST00000519386 IQGAP1P46940 1657 aa10.26□□□□□ -0.77
MRPS28-205ENST00000519386 MED14O60244 1454 aa10.26□□□□□ -0.77
MRPS28-205ENST00000519386 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
MRPS28-205ENST00000519386 KIAA1210Q9ULL0 1709 aa10.26□□□□□ -0.77
MRPS28-205ENST00000519386 SPATA31E1Q6ZUB1 1445 aa10.25□□□□□ -0.77
MRPS28-205ENST00000519386 NUTM2DQ5VT03 806 aaPredicted RBP10.25□□□□□ -0.77
MRPS28-205ENST00000519386 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
MRPS28-205ENST00000519386 NEXMIFQ5QGS0 1516 aa10.24□□□□□ -0.77
MRPS28-205ENST00000519386 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
MRPS28-205ENST00000519386 PPLO60437 1756 aa10.24□□□□□ -0.77
MRPS28-205ENST00000519386 RGL3Q3MIN7 710 aa10.23□□□□□ -0.77
MRPS28-205ENST00000519386 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.23□□□□□ -0.77
MRPS28-205ENST00000519386 L3MBTL2Q969R5 705 aa10.23□□□□□ -0.77
MRPS28-205ENST00000519386 HDGFP51858 240 aaKnown RBP10.22□□□□□ -0.77
MRPS28-205ENST00000519386 MIER1Q8N108 512 aa10.22□□□□□ -0.77
MRPS28-205ENST00000519386 PLEKHG1Q9ULL1 1385 aa10.22□□□□□ -0.77
MRPS28-205ENST00000519386 BCANQ96GW7 911 aa10.21□□□□□ -0.77
MRPS28-205ENST00000519386 RPGRIP1LQ68CZ1 1315 aa10.21□□□□□ -0.78
MRPS28-205ENST00000519386 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
MRPS28-205ENST00000519386 STAC3Q96MF2 364 aa10.2□□□□□ -0.78
MRPS28-205ENST00000519386 SLC26A8Q96RN1 970 aa10.2□□□□□ -0.78
MRPS28-205ENST00000519386 NRXN3Q9Y4C0 1643 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms