RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 SPHKAPQ2M3C7 1700 aa27.78■■■□□ 2.04
FAM49B-208ENST00000518344 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.77■■■□□ 2.04
FAM49B-208ENST00000518344 SLC26A8Q96RN1 970 aa27.77■■■□□ 2.04
FAM49B-208ENST00000518344 ZFYVE9O95405 1425 aa27.76■■■□□ 2.04
FAM49B-208ENST00000518344 ACIN1Q9UKV3 1341 aaKnown RBP27.75■■■□□ 2.03
FAM49B-208ENST00000518344 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
FAM49B-208ENST00000518344 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
FAM49B-208ENST00000518344 MYO5BQ9ULV0 1848 aa27.73■■■□□ 2.03
FAM49B-208ENST00000518344 TRPM2O94759 1503 aa27.72■■■□□ 2.03
FAM49B-208ENST00000518344 CPS1P31327 1500 aa27.72■■■□□ 2.03
FAM49B-208ENST00000518344 IQSEC2Q5JU85 1478 aa27.72■■■□□ 2.03
FAM49B-208ENST00000518344 PLEKHG1Q9ULL1 1385 aa27.7■■■□□ 2.02
FAM49B-208ENST00000518344 CLTCL1P53675 1640 aa27.69■■■□□ 2.02
FAM49B-208ENST00000518344 UBAP1LF5GYI3 381 aa27.67■■■□□ 2.02
FAM49B-208ENST00000518344 KCNA6P17658 529 aa27.63■■■□□ 2.01
FAM49B-208ENST00000518344 TBX22Q9Y458 520 aa27.61■■■□□ 2.01
FAM49B-208ENST00000518344 STRCP1A6NGW2 1772 aa27.6■■■□□ 2.01
FAM49B-208ENST00000518344 LRRC7Q96NW7 1537 aa27.6■■■□□ 2.01
FAM49B-208ENST00000518344 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2.01
FAM49B-208ENST00000518344 HRCP23327 699 aa27.58■■■□□ 2.01
FAM49B-208ENST00000518344 TOM1O60784 492 aa27.56■■■□□ 2
FAM49B-208ENST00000518344 PROSER2Q86WR7 435 aaPredicted RBP27.56■■■□□ 2
FAM49B-208ENST00000518344 KIF1BO60333 1816 aa27.55■■■□□ 2
FAM49B-208ENST00000518344 ADAMTS13Q76LX8 1427 aa27.55■■■□□ 2
FAM49B-208ENST00000518344 RGL3Q3MIN7 710 aa27.54■■■□□ 2
FAM49B-208ENST00000518344 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
FAM49B-208ENST00000518344 PIP4K2BP78356 416 aa27.53■■■□□ 2
FAM49B-208ENST00000518344 RBM33Q96EV2 1170 aaKnown RBP27.53■■■□□ 2
FAM49B-208ENST00000518344 RPGRIP1LQ68CZ1 1315 aa27.52■■■□□ 2
FAM49B-208ENST00000518344 VGFO15240 615 aaPredicted RBP27.52■■■□□ 2
FAM49B-208ENST00000518344 NEXMIFQ5QGS0 1516 aa27.51■■■□□ 2
FAM49B-208ENST00000518344 TMEM94Q12767 1356 aa27.49■■□□□ 1.99
FAM49B-208ENST00000518344 DIP2AQ14689 1571 aa27.47■■□□□ 1.99
FAM49B-208ENST00000518344 AMOTL2Q9Y2J4 779 aa27.46■■□□□ 1.99
FAM49B-208ENST00000518344 NWD1Q149M9 1564 aa27.45■■□□□ 1.99
FAM49B-208ENST00000518344 PIK3R4Q99570 1358 aa27.45■■□□□ 1.98
FAM49B-208ENST00000518344 NKTRP30414 1462 aaKnown RBP27.44■■□□□ 1.98
FAM49B-208ENST00000518344 SETBP1Q9Y6X0 1596 aa27.44■■□□□ 1.98
FAM49B-208ENST00000518344 SPATA31E1Q6ZUB1 1445 aa27.43■■□□□ 1.98
FAM49B-208ENST00000518344 METP08581 1390 aa27.41■■□□□ 1.98
FAM49B-208ENST00000518344 CHD2O14647 1828 aaKnown RBP27.41■■□□□ 1.98
FAM49B-208ENST00000518344 NRXN3Q9Y4C0 1643 aa27.41■■□□□ 1.98
FAM49B-208ENST00000518344 ANKRD30BQ9BXX2 1392 aa27.4■■□□□ 1.98
FAM49B-208ENST00000518344 PTPRUQ92729 1446 aa27.4■■□□□ 1.98
FAM49B-208ENST00000518344 C14orf37Q86TY3 774 aa27.39■■□□□ 1.98
FAM49B-208ENST00000518344 ADGRF5Q8IZF2 1346 aa27.37■■□□□ 1.97
FAM49B-208ENST00000518344 XIRP1Q702N8 1843 aaKnown RBP27.36■■□□□ 1.97
FAM49B-208ENST00000518344 ALKQ9UM73 1620 aa27.35■■□□□ 1.97
FAM49B-208ENST00000518344 MSH6P52701 1360 aa27.35■■□□□ 1.97
FAM49B-208ENST00000518344 PPLO60437 1756 aa27.34■■□□□ 1.97
FAM49B-208ENST00000518344 HSPA1LP34931 641 aa27.32■■□□□ 1.96
FAM49B-208ENST00000518344 TRIM26Q12899 539 aaPredicted RBP27.3■■□□□ 1.96
FAM49B-208ENST00000518344 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
FAM49B-208ENST00000518344 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
FAM49B-208ENST00000518344 XRN1Q8IZH2 1706 aaKnown RBP27.24■■□□□ 1.95
FAM49B-208ENST00000518344 ATF3P18847 181 aa27.24■■□□□ 1.95
FAM49B-208ENST00000518344 SLAIN2Q9P270 581 aa27.24■■□□□ 1.95
FAM49B-208ENST00000518344 IFT172Q9UG01 1749 aa27.22■■□□□ 1.95
FAM49B-208ENST00000518344 TMEM132EQ6IEE7 984 aa27.22■■□□□ 1.95
FAM49B-208ENST00000518344 KDM2AQ9Y2K7 1162 aa27.22■■□□□ 1.95
FAM49B-208ENST00000518344 CADPS2Q86UW7 1296 aa27.21■■□□□ 1.95
FAM49B-208ENST00000518344 DCAF11Q8TEB1 546 aa27.21■■□□□ 1.95
FAM49B-208ENST00000518344 STK26Q9P289 416 aa27.21■■□□□ 1.95
FAM49B-208ENST00000518344 PIK3C2GO75747 1445 aa27.21■■□□□ 1.95
FAM49B-208ENST00000518344 SETD1AO15047 1707 aaKnown RBP27.2■■□□□ 1.94
FAM49B-208ENST00000518344 FAM135BQ49AJ0 1406 aa27.2■■□□□ 1.94
FAM49B-208ENST00000518344 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
FAM49B-208ENST00000518344 CFAP70Q5T0N1 1121 aa27.18■■□□□ 1.94
FAM49B-208ENST00000518344 C14orf93Q9H972 538 aaKnown RBP27.18■■□□□ 1.94
FAM49B-208ENST00000518344 MYOM2P54296 1465 aa27.17■■□□□ 1.94
FAM49B-208ENST00000518344 PTCH1Q13635 1447 aa27.15■■□□□ 1.94
FAM49B-208ENST00000518344 NRXN1Q9ULB1 1477 aa27.14■■□□□ 1.94
FAM49B-208ENST00000518344 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.14■■□□□ 1.94
FAM49B-208ENST00000518344 LRPPRCP42704 1394 aaKnown RBP27.12■■□□□ 1.93
FAM49B-208ENST00000518344 DHX57Q6P158 1386 aaKnown RBP27.11■■□□□ 1.93
FAM49B-208ENST00000518344 ADGRL3Q9HAR2 1447 aa27.11■■□□□ 1.93
FAM49B-208ENST00000518344 STAC3Q96MF2 364 aa27.11■■□□□ 1.93
FAM49B-208ENST00000518344 ROBO1Q9Y6N7 1651 aa27.1■■□□□ 1.93
FAM49B-208ENST00000518344 DCCP43146 1447 aa27.09■■□□□ 1.93
FAM49B-208ENST00000518344 WAPLQ7Z5K2 1190 aa27.09■■□□□ 1.93
FAM49B-208ENST00000518344 ABCC11Q96J66 1382 aa27.09■■□□□ 1.93
FAM49B-208ENST00000518344 PRAG1Q86YV5 1406 aa27.08■■□□□ 1.93
FAM49B-208ENST00000518344 YTHDC2Q9H6S0 1430 aaKnown RBP27.08■■□□□ 1.93
FAM49B-208ENST00000518344 ASXL1Q8IXJ9 1541 aa27.08■■□□□ 1.93
FAM49B-208ENST00000518344 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
FAM49B-208ENST00000518344 NEUROD1Q13562 356 aa27.06■■□□□ 1.92
FAM49B-208ENST00000518344 DISP3Q9P2K9 1392 aa27.04■■□□□ 1.92
FAM49B-208ENST00000518344 TECPR2O15040 1411 aa27.04■■□□□ 1.92
FAM49B-208ENST00000518344 MST1RQ04912 1400 aa27.03■■□□□ 1.92
FAM49B-208ENST00000518344 BRINP3Q76B58 766 aa27.03■■□□□ 1.92
FAM49B-208ENST00000518344 NALCNQ8IZF0 1738 aa27.02■■□□□ 1.92
FAM49B-208ENST00000518344 PLEKHH1Q9ULM0 1364 aa27.02■■□□□ 1.92
FAM49B-208ENST00000518344 LAMC1P11047 1609 aa27.01■■□□□ 1.91
FAM49B-208ENST00000518344 SIRT1Q96EB6 747 aa27■■□□□ 1.91
FAM49B-208ENST00000518344 TRAK1Q9UPV9 953 aa26.98■■□□□ 1.91
FAM49B-208ENST00000518344 SAFB2Q14151 953 aaKnown RBP eCLIP26.97■■□□□ 1.91
FAM49B-208ENST00000518344 L3MBTL2Q969R5 705 aa26.97■■□□□ 1.91
FAM49B-208ENST00000518344 PRAM1Q96QH2 718 aa26.97■■□□□ 1.91
FAM49B-208ENST00000518344 POGKQ9P215 609 aa26.97■■□□□ 1.91
FAM49B-208ENST00000518344 C1orf167Q5SNV9 1468 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms