RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 TRIM52Q96A61 297 aa9.22□□□□□ -0.93
RN7SKP238-201ENST00000516483 SLC52A1Q9NWF4 448 aa9.22□□□□□ -0.93
RN7SKP238-201ENST00000516483 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
RN7SKP238-201ENST00000516483 RPRD2Q5VT52 1461 aaKnown RBP9.21□□□□□ -0.93
RN7SKP238-201ENST00000516483 ZNF326Q5BKZ1 582 aaKnown RBP9.2□□□□□ -0.94
RN7SKP238-201ENST00000516483 ILDR2Q71H61 639 aa9.2□□□□□ -0.94
RN7SKP238-201ENST00000516483 TMEM131LA2VDJ0 1609 aa9.2□□□□□ -0.94
RN7SKP238-201ENST00000516483 ALKQ9UM73 1620 aa9.2□□□□□ -0.94
RN7SKP238-201ENST00000516483 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
RN7SKP238-201ENST00000516483 NAIPQ13075 1403 aa9.19□□□□□ -0.94
RN7SKP238-201ENST00000516483 KDM5AP29375 1690 aaKnown RBP9.18□□□□□ -0.94
RN7SKP238-201ENST00000516483 TMEM94Q12767 1356 aa9.18□□□□□ -0.94
RN7SKP238-201ENST00000516483 FOXD1Q16676 465 aa9.18□□□□□ -0.94
RN7SKP238-201ENST00000516483 XIRP1Q702N8 1843 aaKnown RBP9.18□□□□□ -0.94
RN7SKP238-201ENST00000516483 PROSER2Q86WR7 435 aaPredicted RBP9.18□□□□□ -0.94
RN7SKP238-201ENST00000516483 SPHKAPQ2M3C7 1700 aa9.17□□□□□ -0.94
RN7SKP238-201ENST00000516483 C14orf37Q86TY3 774 aa9.17□□□□□ -0.94
RN7SKP238-201ENST00000516483 PLEKHG1Q9ULL1 1385 aa9.16□□□□□ -0.94
RN7SKP238-201ENST00000516483 KCNA6P17658 529 aa9.16□□□□□ -0.94
RN7SKP238-201ENST00000516483 SLC4A1APQ9BWU0 796 aaKnown RBP9.15□□□□□ -0.94
RN7SKP238-201ENST00000516483 CLTCL1P53675 1640 aa9.15□□□□□ -0.94
RN7SKP238-201ENST00000516483 HFM1A2PYH4 1435 aa9.14□□□□□ -0.95
RN7SKP238-201ENST00000516483 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
RN7SKP238-201ENST00000516483 HDGFP51858 240 aaKnown RBP9.13□□□□□ -0.95
RN7SKP238-201ENST00000516483 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.13□□□□□ -0.95
RN7SKP238-201ENST00000516483 ADAMTS13Q76LX8 1427 aa9.13□□□□□ -0.95
RN7SKP238-201ENST00000516483 MSH6P52701 1360 aa9.12□□□□□ -0.95
RN7SKP238-201ENST00000516483 NWD1Q149M9 1564 aa9.12□□□□□ -0.95
RN7SKP238-201ENST00000516483 PHF23Q9BUL5 403 aaPredicted RBP9.12□□□□□ -0.95
RN7SKP238-201ENST00000516483 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
RN7SKP238-201ENST00000516483 TRPM2O94759 1503 aa9.11□□□□□ -0.95
RN7SKP238-201ENST00000516483 PTPRUQ92729 1446 aa9.11□□□□□ -0.95
RN7SKP238-201ENST00000516483 ROBO1Q9Y6N7 1651 aa9.1□□□□□ -0.95
RN7SKP238-201ENST00000516483 CHD2O14647 1828 aaKnown RBP9.1□□□□□ -0.95
RN7SKP238-201ENST00000516483 AMOTL2Q9Y2J4 779 aa9.1□□□□□ -0.95
RN7SKP238-201ENST00000516483 NRXN3Q9Y4C0 1643 aa9.09□□□□□ -0.95
RN7SKP238-201ENST00000516483 RGL3Q3MIN7 710 aa9.09□□□□□ -0.95
RN7SKP238-201ENST00000516483 TBX22Q9Y458 520 aa9.09□□□□□ -0.95
RN7SKP238-201ENST00000516483 KIF1BO60333 1816 aa9.09□□□□□ -0.95
RN7SKP238-201ENST00000516483 NEXMIFQ5QGS0 1516 aa9.09□□□□□ -0.95
RN7SKP238-201ENST00000516483 METP08581 1390 aa9.09□□□□□ -0.95
RN7SKP238-201ENST00000516483 DIP2AQ14689 1571 aa9.08□□□□□ -0.96
RN7SKP238-201ENST00000516483 ATF3P18847 181 aa9.07□□□□□ -0.96
RN7SKP238-201ENST00000516483 SLAIN2Q9P270 581 aa9.07□□□□□ -0.96
RN7SKP238-201ENST00000516483 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
RN7SKP238-201ENST00000516483 SETBP1Q9Y6X0 1596 aa9.06□□□□□ -0.96
RN7SKP238-201ENST00000516483 FAM135BQ49AJ0 1406 aa9.05□□□□□ -0.96
RN7SKP238-201ENST00000516483 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.05□□□□□ -0.96
RN7SKP238-201ENST00000516483 PHLPP1O60346 1717 aa9.05□□□□□ -0.96
RN7SKP238-201ENST00000516483 XRN1Q8IZH2 1706 aaKnown RBP9.05□□□□□ -0.96
RN7SKP238-201ENST00000516483 CCDC144AA2RUR9 1427 aa9.05□□□□□ -0.96
RN7SKP238-201ENST00000516483 RAB3GAP2Q9H2M9 1393 aa9.04□□□□□ -0.96
RN7SKP238-201ENST00000516483 SOCS7O14512 581 aa9.04□□□□□ -0.96
RN7SKP238-201ENST00000516483 DDX17Q92841 729 aaKnown RBP9.04□□□□□ -0.96
RN7SKP238-201ENST00000516483 SETD5Q9C0A6 1442 aa9.04□□□□□ -0.96
RN7SKP238-201ENST00000516483 PIK3R4Q99570 1358 aa9.03□□□□□ -0.96
RN7SKP238-201ENST00000516483 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
RN7SKP238-201ENST00000516483 C19orf44Q9H6X5 657 aa9.03□□□□□ -0.96
RN7SKP238-201ENST00000516483 STK26Q9P289 416 aa9.03□□□□□ -0.96
RN7SKP238-201ENST00000516483 ADGRF5Q8IZF2 1346 aa9.03□□□□□ -0.96
RN7SKP238-201ENST00000516483 PPLO60437 1756 aa9.02□□□□□ -0.97
RN7SKP238-201ENST00000516483 VGFO15240 615 aaPredicted RBP9.02□□□□□ -0.97
RN7SKP238-201ENST00000516483 NALCNQ8IZF0 1738 aa9.02□□□□□ -0.97
RN7SKP238-201ENST00000516483 ROBO2Q9HCK4 1378 aa9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 NUTM2BA6NNL0 878 aaPredicted RBP9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 NUTM2EB1AL46 878 aaPredicted RBP9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 TMEM132EQ6IEE7 984 aa9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 BRINP3Q76B58 766 aa9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 NUTM2AQ8IVF1 878 aaPredicted RBP9.01□□□□□ -0.97
RN7SKP238-201ENST00000516483 SETD1AO15047 1707 aaKnown RBP9□□□□□ -0.97
RN7SKP238-201ENST00000516483 ADGRL3Q9HAR2 1447 aa9□□□□□ -0.97
RN7SKP238-201ENST00000516483 MEX3CQ5U5Q3 659 aaKnown RBP9□□□□□ -0.97
RN7SKP238-201ENST00000516483 RGS17Q9UGC6 210 aaPredicted RBP9□□□□□ -0.97
RN7SKP238-201ENST00000516483 COL16A1Q07092 1604 aaPredicted RBP9□□□□□ -0.97
RN7SKP238-201ENST00000516483 MST1RQ04912 1400 aa8.99□□□□□ -0.97
RN7SKP238-201ENST00000516483 SPATA31E1Q6ZUB1 1445 aa8.99□□□□□ -0.97
RN7SKP238-201ENST00000516483 ASXL1Q8IXJ9 1541 aa8.99□□□□□ -0.97
RN7SKP238-201ENST00000516483 RPGRIP1LQ68CZ1 1315 aa8.99□□□□□ -0.97
RN7SKP238-201ENST00000516483 JCADQ9P266 1359 aa8.99□□□□□ -0.97
RN7SKP238-201ENST00000516483 NCOA3Q9Y6Q9 1424 aa8.98□□□□□ -0.97
RN7SKP238-201ENST00000516483 SAFB2Q14151 953 aaKnown RBP eCLIP8.98□□□□□ -0.97
RN7SKP238-201ENST00000516483 POTEAQ6S8J7 498 aa8.98□□□□□ -0.97
RN7SKP238-201ENST00000516483 WAPLQ7Z5K2 1190 aa8.98□□□□□ -0.97
RN7SKP238-201ENST00000516483 LRP6O75581 1613 aa8.98□□□□□ -0.97
RN7SKP238-201ENST00000516483 PLEKHH1Q9ULM0 1364 aa8.98□□□□□ -0.97
RN7SKP238-201ENST00000516483 PLEKHG5O94827 1062 aa8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 XPCQ01831 940 aaPredicted RBP8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 ORAI2Q96SN7 254 aa8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 IFT172Q9UG01 1749 aa8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 DCCP43146 1447 aa8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 PTCH1Q13635 1447 aa8.97□□□□□ -0.97
RN7SKP238-201ENST00000516483 AHDC1Q5TGY3 1603 aaPredicted RBP8.96□□□□□ -0.98
RN7SKP238-201ENST00000516483 C1orf167Q5SNV9 1468 aa8.96□□□□□ -0.98
RN7SKP238-201ENST00000516483 CFAP70Q5T0N1 1121 aa8.95□□□□□ -0.98
RN7SKP238-201ENST00000516483 ANKRD30BQ9BXX2 1392 aa8.95□□□□□ -0.98
RN7SKP238-201ENST00000516483 PIK3C2GO75747 1445 aa8.95□□□□□ -0.98
RN7SKP238-201ENST00000516483 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
RN7SKP238-201ENST00000516483 ESCO1Q5FWF5 840 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms