RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
PHF3-212ENST00000515594 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
PHF3-212ENST00000515594 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
PHF3-212ENST00000515594 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
PHF3-212ENST00000515594 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
PHF3-212ENST00000515594 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
PHF3-212ENST00000515594 IGHDP01880 384 aa16.84■□□□□ 0.29
PHF3-212ENST00000515594 EIF2AK4Q9P2K8 1649 aaKnown RBP16.83■□□□□ 0.28
PHF3-212ENST00000515594 PPM1GO15355 546 aaPredicted RBP16.83■□□□□ 0.28
PHF3-212ENST00000515594 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
PHF3-212ENST00000515594 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
PHF3-212ENST00000515594 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
PHF3-212ENST00000515594 PANK1Q8TE04 598 aa16.82■□□□□ 0.28
PHF3-212ENST00000515594 MAST1Q9Y2H9 1570 aa16.82■□□□□ 0.28
PHF3-212ENST00000515594 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
PHF3-212ENST00000515594 LAMC1P11047 1609 aa16.82■□□□□ 0.28
PHF3-212ENST00000515594 FRAT2O75474 233 aaPredicted RBP16.81■□□□□ 0.28
PHF3-212ENST00000515594 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
PHF3-212ENST00000515594 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
PHF3-212ENST00000515594 RNF17Q9BXT8 1623 aaKnown RBP16.81■□□□□ 0.28
PHF3-212ENST00000515594 SEC24BO95487 1268 aa16.81■□□□□ 0.28
PHF3-212ENST00000515594 FRAT1Q92837 279 aaPredicted RBP16.81■□□□□ 0.28
PHF3-212ENST00000515594 DDRGK1Q96HY6 314 aa16.81■□□□□ 0.28
PHF3-212ENST00000515594 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
PHF3-212ENST00000515594 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
PHF3-212ENST00000515594 UGGT1Q9NYU2 1555 aa16.8■□□□□ 0.28
PHF3-212ENST00000515594 DUOX2Q9NRD8 1548 aa16.8■□□□□ 0.28
PHF3-212ENST00000515594 CHD1O14646 1710 aa16.79■□□□□ 0.28
PHF3-212ENST00000515594 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
PHF3-212ENST00000515594 ATP10AO60312 1499 aa16.78■□□□□ 0.28
PHF3-212ENST00000515594 PLXNC1O60486 1568 aa16.78■□□□□ 0.28
PHF3-212ENST00000515594 ASXL1Q8IXJ9 1541 aa16.78■□□□□ 0.28
PHF3-212ENST00000515594 SPAG9O60271 1321 aaKnown RBP16.78■□□□□ 0.28
PHF3-212ENST00000515594 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
PHF3-212ENST00000515594 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
PHF3-212ENST00000515594 MYOM1P52179 1685 aa16.77■□□□□ 0.27
PHF3-212ENST00000515594 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.27
PHF3-212ENST00000515594 KIF3BO15066 747 aa16.76■□□□□ 0.27
PHF3-212ENST00000515594 GSE1Q14687 1217 aa16.76■□□□□ 0.27
PHF3-212ENST00000515594 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
PHF3-212ENST00000515594 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
PHF3-212ENST00000515594 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
PHF3-212ENST00000515594 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
PHF3-212ENST00000515594 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
PHF3-212ENST00000515594 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
PHF3-212ENST00000515594 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
PHF3-212ENST00000515594 INSRP06213 1382 aa16.73■□□□□ 0.27
PHF3-212ENST00000515594 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
PHF3-212ENST00000515594 SYNMO15061 1565 aa16.72■□□□□ 0.27
PHF3-212ENST00000515594 NUTM2DQ5VT03 806 aaPredicted RBP16.72■□□□□ 0.27
PHF3-212ENST00000515594 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
PHF3-212ENST00000515594 PLCH2O75038 1416 aa16.72■□□□□ 0.27
PHF3-212ENST00000515594 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
PHF3-212ENST00000515594 CFAP65Q6ZU64 1925 aaKnown RBP16.71■□□□□ 0.27
PHF3-212ENST00000515594 CDCA8Q53HL2 280 aa16.71■□□□□ 0.27
PHF3-212ENST00000515594 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
PHF3-212ENST00000515594 USP19O94966 1318 aa16.71■□□□□ 0.26
PHF3-212ENST00000515594 RLBP1P12271 317 aa16.71■□□□□ 0.26
PHF3-212ENST00000515594 SPHKAPQ2M3C7 1700 aa16.71■□□□□ 0.26
PHF3-212ENST00000515594 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
PHF3-212ENST00000515594 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
PHF3-212ENST00000515594 SLC12A5Q9H2X9 1139 aa16.7■□□□□ 0.26
PHF3-212ENST00000515594 ARXQ96QS3 562 aa16.7■□□□□ 0.26
PHF3-212ENST00000515594 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
PHF3-212ENST00000515594 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
PHF3-212ENST00000515594 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
PHF3-212ENST00000515594 E9PSI1 815 aa16.69■□□□□ 0.26
PHF3-212ENST00000515594 ABCC1P33527 1531 aa16.69■□□□□ 0.26
PHF3-212ENST00000515594 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
PHF3-212ENST00000515594 TRPM2O94759 1503 aa16.68■□□□□ 0.26
PHF3-212ENST00000515594 CEP152O94986 1710 aa16.67■□□□□ 0.26
PHF3-212ENST00000515594 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
PHF3-212ENST00000515594 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
PHF3-212ENST00000515594 PCDHB15Q9Y5E8 787 aa16.66■□□□□ 0.26
PHF3-212ENST00000515594 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
PHF3-212ENST00000515594 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
PHF3-212ENST00000515594 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.266e-6■■■□□ 18.1
PHF3-212ENST00000515594 POGKQ9P215 609 aa16.65■□□□□ 0.26
PHF3-212ENST00000515594 MORC1Q86VD1 984 aa16.64■□□□□ 0.25
PHF3-212ENST00000515594 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
PHF3-212ENST00000515594 ZFYVE16Q7Z3T8 1539 aa16.64■□□□□ 0.25
PHF3-212ENST00000515594 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
PHF3-212ENST00000515594 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
PHF3-212ENST00000515594 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
PHF3-212ENST00000515594 PTPRTO14522 1441 aa16.62■□□□□ 0.25
PHF3-212ENST00000515594 MTHFSP49914 203 aa16.61■□□□□ 0.25
PHF3-212ENST00000515594 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
PHF3-212ENST00000515594 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
PHF3-212ENST00000515594 CGNL1Q0VF96 1302 aa16.59■□□□□ 0.25
PHF3-212ENST00000515594 NOS1P29475 1434 aa16.59■□□□□ 0.25
PHF3-212ENST00000515594 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
PHF3-212ENST00000515594 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
PHF3-212ENST00000515594 MROH2AA6NES4 1674 aa16.58■□□□□ 0.24
PHF3-212ENST00000515594 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
PHF3-212ENST00000515594 PDE3AQ14432 1141 aa16.58■□□□□ 0.24
PHF3-212ENST00000515594 KANK1Q14678 1352 aa16.57■□□□□ 0.24
PHF3-212ENST00000515594 GGT6Q6P531 493 aa16.57■□□□□ 0.24
PHF3-212ENST00000515594 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
PHF3-212ENST00000515594 TET3O43151 1660 aa16.56■□□□□ 0.24
PHF3-212ENST00000515594 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms