RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 PLCH2O75038 1416 aa12.75□□□□□ -0.37
RAPGEF6-214ENST00000515170 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
RAPGEF6-214ENST00000515170 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
RAPGEF6-214ENST00000515170 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
RAPGEF6-214ENST00000515170 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
RAPGEF6-214ENST00000515170 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
RAPGEF6-214ENST00000515170 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF6-214ENST00000515170 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
RAPGEF6-214ENST00000515170 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
RAPGEF6-214ENST00000515170 NLRP6P59044 892 aa12.71□□□□□ -0.37
RAPGEF6-214ENST00000515170 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.38
RAPGEF6-214ENST00000515170 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF6-214ENST00000515170 THEMISQ8N1K5 641 aaPredicted RBP12.71□□□□□ -0.38
RAPGEF6-214ENST00000515170 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.38
RAPGEF6-214ENST00000515170 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
RAPGEF6-214ENST00000515170 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
RAPGEF6-214ENST00000515170 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
RAPGEF6-214ENST00000515170 SLC4A10Q6U841 1118 aa12.69□□□□□ -0.38
RAPGEF6-214ENST00000515170 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
RAPGEF6-214ENST00000515170 PROSER2Q86WR7 435 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF6-214ENST00000515170 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
RAPGEF6-214ENST00000515170 MAPKBP1O60336 1514 aa12.68□□□□□ -0.38
RAPGEF6-214ENST00000515170 ZBED9Q6R2W3 1325 aa12.68□□□□□ -0.38
RAPGEF6-214ENST00000515170 RIPK4P57078 832 aa12.68□□□□□ -0.38
RAPGEF6-214ENST00000515170 RPRD2Q5VT52 1461 aaKnown RBP12.67□□□□□ -0.38
RAPGEF6-214ENST00000515170 OS9Q13438 667 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF6-214ENST00000515170 EXOC6Q8TAG9 804 aa12.67□□□□□ -0.38
RAPGEF6-214ENST00000515170 ATF3P18847 181 aa12.66□□□□□ -0.38
RAPGEF6-214ENST00000515170 ABTB2Q8N961 1025 aa12.66□□□□□ -0.38
RAPGEF6-214ENST00000515170 TSHZ2Q9NRE2 1034 aa12.66□□□□□ -0.38
RAPGEF6-214ENST00000515170 ABCC2Q92887 1545 aa12.65□□□□□ -0.38
RAPGEF6-214ENST00000515170 NOS1P29475 1434 aa12.65□□□□□ -0.38
RAPGEF6-214ENST00000515170 NPHP1O15259 732 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 RRS1Q15050 365 aaKnown RBP12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 KDM5BQ9UGL1 1544 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
RAPGEF6-214ENST00000515170 IPO8O15397 1037 aaKnown RBP12.63□□□□□ -0.39
RAPGEF6-214ENST00000515170 FBLN1P23142 703 aa12.63□□□□□ -0.39
RAPGEF6-214ENST00000515170 SAMD9Q5K651 1589 aa12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 MS4A1P11836 297 aa12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 CALD1Q05682 793 aaKnown RBP12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 PNISRQ8TF01 805 aaKnown RBP12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 STK31Q9BXU1 1019 aa12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 CFAP43Q8NDM7 1665 aa12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
RAPGEF6-214ENST00000515170 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
RAPGEF6-214ENST00000515170 EIF2S2P20042 333 aaKnown RBP12.61□□□□□ -0.39
RAPGEF6-214ENST00000515170 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
RAPGEF6-214ENST00000515170 A2MP01023 1474 aa12.61□□□□□ -0.39
RAPGEF6-214ENST00000515170 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 EVA1CP58658 441 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 E9PSI1 815 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
RAPGEF6-214ENST00000515170 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
RAPGEF6-214ENST00000515170 POGZQ7Z3K3 1410 aa12.59□□□□□ -0.39
RAPGEF6-214ENST00000515170 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
RAPGEF6-214ENST00000515170 TEFQ10587 303 aa12.59□□□□□ -0.39
RAPGEF6-214ENST00000515170 AMOTL2Q9Y2J4 779 aa12.59□□□□□ -0.39
RAPGEF6-214ENST00000515170 DISP3Q9P2K9 1392 aa12.59□□□□□ -0.39
RAPGEF6-214ENST00000515170 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF6-214ENST00000515170 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
RAPGEF6-214ENST00000515170 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
RAPGEF6-214ENST00000515170 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 SYTL4Q96C24 671 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF6-214ENST00000515170 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 NME9Q86XW9 330 aa12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 C1orf141Q5JVX7 400 aa12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 FOXO3O43524 673 aa12.56□□□□□ -0.4
RAPGEF6-214ENST00000515170 PANK1Q8TE04 598 aa12.55□□□□□ -0.4
RAPGEF6-214ENST00000515170 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
RAPGEF6-214ENST00000515170 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
RAPGEF6-214ENST00000515170 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF6-214ENST00000515170 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
RAPGEF6-214ENST00000515170 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
RAPGEF6-214ENST00000515170 RWDD1Q9H446 243 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF6-214ENST00000515170 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
RAPGEF6-214ENST00000515170 PZPP20742 1482 aa12.53□□□□□ -0.4
RAPGEF6-214ENST00000515170 CFAP65Q6ZU64 1925 aaKnown RBP12.53□□□□□ -0.4
RAPGEF6-214ENST00000515170 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
RAPGEF6-214ENST00000515170 GPRASP1Q5JY77 1395 aa12.52□□□□□ -0.4
RAPGEF6-214ENST00000515170 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.4
RAPGEF6-214ENST00000515170 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms