RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 EHBP1L1Q8N3D4 1523 aa19.27■□□□□ 0.68
SMAD5-210ENST00000515005 QTRT2Q9H974 415 aaKnown RBP19.27■□□□□ 0.68
SMAD5-210ENST00000515005 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.67
SMAD5-210ENST00000515005 DIP2AQ14689 1571 aa19.27■□□□□ 0.67
SMAD5-210ENST00000515005 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
SMAD5-210ENST00000515005 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
SMAD5-210ENST00000515005 IDI1Q13907 227 aa19.24■□□□□ 0.67
SMAD5-210ENST00000515005 FOXD1Q16676 465 aa19.24■□□□□ 0.67
SMAD5-210ENST00000515005 BCANQ96GW7 911 aa19.24■□□□□ 0.67
SMAD5-210ENST00000515005 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
SMAD5-210ENST00000515005 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
SMAD5-210ENST00000515005 C14orf37Q86TY3 774 aa19.21■□□□□ 0.67
SMAD5-210ENST00000515005 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
SMAD5-210ENST00000515005 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
SMAD5-210ENST00000515005 CADPS2Q86UW7 1296 aa19.19■□□□□ 0.66
SMAD5-210ENST00000515005 BRINP3Q76B58 766 aa19.18■□□□□ 0.66
SMAD5-210ENST00000515005 NCOA3Q9Y6Q9 1424 aa19.17■□□□□ 0.66
SMAD5-210ENST00000515005 ATF3P18847 181 aa19.17■□□□□ 0.66
SMAD5-210ENST00000515005 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
SMAD5-210ENST00000515005 C19orf44Q9H6X5 657 aa19.16■□□□□ 0.66
SMAD5-210ENST00000515005 EP400Q96L91 3159 aa19.14■□□□□ 0.65
SMAD5-210ENST00000515005 SETD5Q9C0A6 1442 aa19.14■□□□□ 0.65
SMAD5-210ENST00000515005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
SMAD5-210ENST00000515005 ADGRB3O60242 1522 aa19.13■□□□□ 0.65
SMAD5-210ENST00000515005 DUOX2Q9NRD8 1548 aa19.12■□□□□ 0.65
SMAD5-210ENST00000515005 PLEKHG1Q9ULL1 1385 aa19.1■□□□□ 0.65
SMAD5-210ENST00000515005 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
SMAD5-210ENST00000515005 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
SMAD5-210ENST00000515005 ADAMTS2O95450 1211 aa19.08■□□□□ 0.64
SMAD5-210ENST00000515005 CCDC125Q86Z20 511 aa19.08■□□□□ 0.64
SMAD5-210ENST00000515005 TBX22Q9Y458 520 aa19.08■□□□□ 0.64
SMAD5-210ENST00000515005 ZFYVE9O95405 1425 aa19.08■□□□□ 0.64
SMAD5-210ENST00000515005 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
SMAD5-210ENST00000515005 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
SMAD5-210ENST00000515005 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
SMAD5-210ENST00000515005 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
SMAD5-210ENST00000515005 DDX17Q92841 729 aaKnown RBP19.06■□□□□ 0.64
SMAD5-210ENST00000515005 NOS1P29475 1434 aa19.06■□□□□ 0.64
SMAD5-210ENST00000515005 USP21Q9UK80 565 aa19.05■□□□□ 0.64
SMAD5-210ENST00000515005 LRP5O75197 1615 aa19.04■□□□□ 0.64
SMAD5-210ENST00000515005 TRPC5Q9UL62 973 aaPredicted RBP19.04■□□□□ 0.64
SMAD5-210ENST00000515005 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
SMAD5-210ENST00000515005 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
SMAD5-210ENST00000515005 KANK1Q14678 1352 aa19.03■□□□□ 0.64
SMAD5-210ENST00000515005 ERBINQ96RT1 1412 aa19.02■□□□□ 0.64
SMAD5-210ENST00000515005 SLC52A1Q9NWF4 448 aa19.02■□□□□ 0.64
SMAD5-210ENST00000515005 ADAMTS13Q76LX8 1427 aa19.01■□□□□ 0.63
SMAD5-210ENST00000515005 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
SMAD5-210ENST00000515005 MST1RQ04912 1400 aa19■□□□□ 0.63
SMAD5-210ENST00000515005 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
SMAD5-210ENST00000515005 ATRNO75882 1429 aa19■□□□□ 0.63
SMAD5-210ENST00000515005 DCCP43146 1447 aa18.99■□□□□ 0.63
SMAD5-210ENST00000515005 HDGFP51858 240 aaKnown RBP18.98■□□□□ 0.63
SMAD5-210ENST00000515005 DEFB132Q7Z7B7 95 aa18.97■□□□□ 0.63
SMAD5-210ENST00000515005 FNBP4Q8N3X1 1017 aaPredicted RBP18.97■□□□□ 0.63
SMAD5-210ENST00000515005 AMOTL2Q9Y2J4 779 aa18.97■□□□□ 0.63
SMAD5-210ENST00000515005 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
SMAD5-210ENST00000515005 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
SMAD5-210ENST00000515005 PTPRUQ92729 1446 aa18.96■□□□□ 0.63
SMAD5-210ENST00000515005 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
SMAD5-210ENST00000515005 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
SMAD5-210ENST00000515005 MYOM3Q5VTT5 1437 aa18.93■□□□□ 0.62
SMAD5-210ENST00000515005 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMAD5-210ENST00000515005 TRPM2O94759 1503 aa18.9■□□□□ 0.62
SMAD5-210ENST00000515005 PTCH1Q13635 1447 aa18.9■□□□□ 0.62
SMAD5-210ENST00000515005 PSDA5PKW4 1024 aaPredicted RBP18.89■□□□□ 0.61
SMAD5-210ENST00000515005 ABCC5O15440 1437 aa18.89■□□□□ 0.61
SMAD5-210ENST00000515005 CROCC2H7BZ55 1655 aa18.89■□□□□ 0.61
SMAD5-210ENST00000515005 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
SMAD5-210ENST00000515005 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
SMAD5-210ENST00000515005 HRCP23327 699 aa18.87■□□□□ 0.61
SMAD5-210ENST00000515005 GJD4Q96KN9 370 aaPredicted RBP18.87■□□□□ 0.61
SMAD5-210ENST00000515005 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
SMAD5-210ENST00000515005 SOS2Q07890 1332 aaPredicted RBP18.84■□□□□ 0.61
SMAD5-210ENST00000515005 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
SMAD5-210ENST00000515005 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
SMAD5-210ENST00000515005 LAMC1P11047 1609 aa18.83■□□□□ 0.61
SMAD5-210ENST00000515005 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
SMAD5-210ENST00000515005 YY1P25490 414 aa18.82■□□□□ 0.6
SMAD5-210ENST00000515005 ADGRL3Q9HAR2 1447 aa18.82■□□□□ 0.6
SMAD5-210ENST00000515005 UNC13BO14795 1591 aa18.81■□□□□ 0.6
SMAD5-210ENST00000515005 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
SMAD5-210ENST00000515005 COL22A1Q8NFW1 1626 aaPredicted RBP18.8■□□□□ 0.6
SMAD5-210ENST00000515005 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
SMAD5-210ENST00000515005 ORAI2Q96SN7 254 aa18.79■□□□□ 0.6
SMAD5-210ENST00000515005 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
SMAD5-210ENST00000515005 GLI3P10071 1580 aa18.79■□□□□ 0.6
SMAD5-210ENST00000515005 MARF1Q9Y4F3 1742 aaKnown RBP18.79■□□□□ 0.6
SMAD5-210ENST00000515005 DAPK1P53355 1430 aa18.78■□□□□ 0.6
SMAD5-210ENST00000515005 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
SMAD5-210ENST00000515005 MYOM2P54296 1465 aa18.77■□□□□ 0.6
SMAD5-210ENST00000515005 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.6
SMAD5-210ENST00000515005 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
SMAD5-210ENST00000515005 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.59
SMAD5-210ENST00000515005 SPHKAPQ2M3C7 1700 aa18.75■□□□□ 0.59
SMAD5-210ENST00000515005 METP08581 1390 aa18.75■□□□□ 0.59
SMAD5-210ENST00000515005 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.74■□□□□ 0.59
SMAD5-210ENST00000515005 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
SMAD5-210ENST00000515005 UNC5CLQ8IV45 518 aa18.72■□□□□ 0.59
SMAD5-210ENST00000515005 SEPT12Q8IYM1 358 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms