RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 CD109Q6YHK3 1445 aa17.66■□□□□ 0.42
TSPAN17-208ENST00000514705 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
TSPAN17-208ENST00000514705 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
TSPAN17-208ENST00000514705 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
TSPAN17-208ENST00000514705 SAFB2Q14151 953 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSPAN17-208ENST00000514705 LRPPRCP42704 1394 aaKnown RBP17.65■□□□□ 0.42
TSPAN17-208ENST00000514705 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
TSPAN17-208ENST00000514705 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
TSPAN17-208ENST00000514705 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
TSPAN17-208ENST00000514705 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
TSPAN17-208ENST00000514705 PZPP20742 1482 aa17.63■□□□□ 0.41
TSPAN17-208ENST00000514705 POGKQ9P215 609 aa17.63■□□□□ 0.41
TSPAN17-208ENST00000514705 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
TSPAN17-208ENST00000514705 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
TSPAN17-208ENST00000514705 DISP3Q9P2K9 1392 aa17.63■□□□□ 0.41
TSPAN17-208ENST00000514705 ERBINQ96RT1 1412 aa17.62■□□□□ 0.41
TSPAN17-208ENST00000514705 RSPH6AQ9H0K4 717 aa17.62■□□□□ 0.41
TSPAN17-208ENST00000514705 SLFN5Q08AF3 891 aa17.61■□□□□ 0.41
TSPAN17-208ENST00000514705 PER1O15534 1290 aaPredicted RBP17.61■□□□□ 0.41
TSPAN17-208ENST00000514705 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
TSPAN17-208ENST00000514705 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
TSPAN17-208ENST00000514705 GPATCH8Q9UKJ3 1502 aaKnown RBP17.6■□□□□ 0.41
TSPAN17-208ENST00000514705 PARD3Q8TEW0 1356 aa17.6■□□□□ 0.41
TSPAN17-208ENST00000514705 SMC4Q9NTJ3 1288 aa17.6■□□□□ 0.41
TSPAN17-208ENST00000514705 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
TSPAN17-208ENST00000514705 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
TSPAN17-208ENST00000514705 C8orf34Q49A92 452 aa17.58■□□□□ 0.41
TSPAN17-208ENST00000514705 HDGFP51858 240 aaKnown RBP17.58■□□□□ 0.41
TSPAN17-208ENST00000514705 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
TSPAN17-208ENST00000514705 CCDC141Q6ZP82 1450 aa17.56■□□□□ 0.4
TSPAN17-208ENST00000514705 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
TSPAN17-208ENST00000514705 CHD1O14646 1710 aa17.56■□□□□ 0.4
TSPAN17-208ENST00000514705 IGHDP01880 384 aa17.56■□□□□ 0.4
TSPAN17-208ENST00000514705 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
TSPAN17-208ENST00000514705 GOLGA6L22H0YM25 854 aa17.55■□□□□ 0.4
TSPAN17-208ENST00000514705 EIF3AQ14152 1382 aaKnown RBP17.55■□□□□ 0.4
TSPAN17-208ENST00000514705 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
TSPAN17-208ENST00000514705 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
TSPAN17-208ENST00000514705 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
TSPAN17-208ENST00000514705 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
TSPAN17-208ENST00000514705 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
TSPAN17-208ENST00000514705 TESK2Q96S53 571 aa17.53■□□□□ 0.4
TSPAN17-208ENST00000514705 WDR7Q9Y4E6 1490 aa17.53■□□□□ 0.4
TSPAN17-208ENST00000514705 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
TSPAN17-208ENST00000514705 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.4
TSPAN17-208ENST00000514705 FANCAO15360 1455 aa17.52■□□□□ 0.4
TSPAN17-208ENST00000514705 PDE3AQ14432 1141 aa17.52■□□□□ 0.4
TSPAN17-208ENST00000514705 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.39
TSPAN17-208ENST00000514705 PLCH2O75038 1416 aa17.51■□□□□ 0.39
TSPAN17-208ENST00000514705 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
TSPAN17-208ENST00000514705 STK26Q9P289 416 aa17.5■□□□□ 0.39
TSPAN17-208ENST00000514705 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
TSPAN17-208ENST00000514705 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
TSPAN17-208ENST00000514705 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
TSPAN17-208ENST00000514705 SEC24BO95487 1268 aa17.49■□□□□ 0.39
TSPAN17-208ENST00000514705 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
TSPAN17-208ENST00000514705 DNMT1P26358 1616 aaKnown RBP17.48■□□□□ 0.39
TSPAN17-208ENST00000514705 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
TSPAN17-208ENST00000514705 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
TSPAN17-208ENST00000514705 DZIP1LQ8IYY4 767 aaKnown RBP17.48■□□□□ 0.39
TSPAN17-208ENST00000514705 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
TSPAN17-208ENST00000514705 WWC1Q8IX03 1113 aa17.47■□□□□ 0.39
TSPAN17-208ENST00000514705 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
TSPAN17-208ENST00000514705 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
TSPAN17-208ENST00000514705 MTHFSP49914 203 aa17.46■□□□□ 0.39
TSPAN17-208ENST00000514705 PRAG1Q86YV5 1406 aa17.46■□□□□ 0.38
TSPAN17-208ENST00000514705 UHRF1BP1Q6BDS2 1440 aa17.45■□□□□ 0.38
TSPAN17-208ENST00000514705 TRAK2O60296 914 aa17.45■□□□□ 0.38
TSPAN17-208ENST00000514705 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
TSPAN17-208ENST00000514705 APBB1O00213 710 aa17.45■□□□□ 0.38
TSPAN17-208ENST00000514705 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
TSPAN17-208ENST00000514705 LNPKQ9C0E8 428 aa17.44■□□□□ 0.38
TSPAN17-208ENST00000514705 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
TSPAN17-208ENST00000514705 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
TSPAN17-208ENST00000514705 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-208ENST00000514705 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-208ENST00000514705 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
TSPAN17-208ENST00000514705 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
TSPAN17-208ENST00000514705 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
TSPAN17-208ENST00000514705 TMEM132EQ6IEE7 984 aa17.42■□□□□ 0.38
TSPAN17-208ENST00000514705 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
TSPAN17-208ENST00000514705 DDX11L8A8MPP1 907 aa17.41■□□□□ 0.38
TSPAN17-208ENST00000514705 TNNQ9UQP3 1299 aa17.41■□□□□ 0.38
TSPAN17-208ENST00000514705 MCM4P33991 863 aa17.41■□□□□ 0.38
TSPAN17-208ENST00000514705 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
TSPAN17-208ENST00000514705 ABCA8O94911 1581 aa17.41■□□□□ 0.38
TSPAN17-208ENST00000514705 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
TSPAN17-208ENST00000514705 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
TSPAN17-208ENST00000514705 KDM5CP41229 1560 aa17.4■□□□□ 0.38
TSPAN17-208ENST00000514705 EID1Q9Y6B2 187 aa17.4■□□□□ 0.38
TSPAN17-208ENST00000514705 RARSP54136 660 aaKnown RBP17.39■□□□□ 0.38
TSPAN17-208ENST00000514705 ITSN2Q9NZM3 1697 aa17.39■□□□□ 0.37
TSPAN17-208ENST00000514705 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
TSPAN17-208ENST00000514705 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
TSPAN17-208ENST00000514705 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
TSPAN17-208ENST00000514705 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
TSPAN17-208ENST00000514705 MSNP26038 577 aaKnown RBP17.38■□□□□ 0.37
TSPAN17-208ENST00000514705 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
TSPAN17-208ENST00000514705 ARID3AQ99856 593 aa17.38■□□□□ 0.37
TSPAN17-208ENST00000514705 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms