RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TOM1O60784 492 aa15.9■□□□□ 0.14
HMGXB3-205ENST00000514469 XIRP1Q702N8 1843 aaKnown RBP15.89■□□□□ 0.13
HMGXB3-205ENST00000514469 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
HMGXB3-205ENST00000514469 TRPM2O94759 1503 aa15.86■□□□□ 0.13
HMGXB3-205ENST00000514469 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
HMGXB3-205ENST00000514469 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
HMGXB3-205ENST00000514469 DIP2AQ14689 1571 aa15.86■□□□□ 0.13
HMGXB3-205ENST00000514469 KCNA6P17658 529 aa15.85■□□□□ 0.13
HMGXB3-205ENST00000514469 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
HMGXB3-205ENST00000514469 CLTCL1P53675 1640 aa15.84■□□□□ 0.13
HMGXB3-205ENST00000514469 PPP1R15AO75807 674 aaPredicted RBP15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 TMEM94Q12767 1356 aa15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 DISP3Q9P2K9 1392 aa15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 ADAMTS13Q76LX8 1427 aa15.83■□□□□ 0.12
HMGXB3-205ENST00000514469 HSPA1LP34931 641 aa15.82■□□□□ 0.12
HMGXB3-205ENST00000514469 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-205ENST00000514469 NRXN3Q9Y4C0 1643 aa15.79■□□□□ 0.12
HMGXB3-205ENST00000514469 SETBP1Q9Y6X0 1596 aa15.79■□□□□ 0.12
HMGXB3-205ENST00000514469 BCANQ96GW7 911 aa15.79■□□□□ 0.12
HMGXB3-205ENST00000514469 NEXMIFQ5QGS0 1516 aa15.78■□□□□ 0.12
HMGXB3-205ENST00000514469 TBX22Q9Y458 520 aa15.78■□□□□ 0.12
HMGXB3-205ENST00000514469 PIK3R4Q99570 1358 aa15.77■□□□□ 0.12
HMGXB3-205ENST00000514469 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.12
HMGXB3-205ENST00000514469 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
HMGXB3-205ENST00000514469 MED1Q15648 1581 aaPredicted RBP15.77■□□□□ 0.11
HMGXB3-205ENST00000514469 PROSER2Q86WR7 435 aaPredicted RBP15.76■□□□□ 0.11
HMGXB3-205ENST00000514469 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
HMGXB3-205ENST00000514469 XRN1Q8IZH2 1706 aaKnown RBP15.74■□□□□ 0.11
HMGXB3-205ENST00000514469 KIF1BO60333 1816 aa15.74■□□□□ 0.11
HMGXB3-205ENST00000514469 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
HMGXB3-205ENST00000514469 NCOA3Q9Y6Q9 1424 aa15.74■□□□□ 0.11
HMGXB3-205ENST00000514469 RBM33Q96EV2 1170 aaKnown RBP15.73■□□□□ 0.11
HMGXB3-205ENST00000514469 PTPRUQ92729 1446 aa15.73■□□□□ 0.11
HMGXB3-205ENST00000514469 MSH6P52701 1360 aa15.73■□□□□ 0.11
HMGXB3-205ENST00000514469 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
HMGXB3-205ENST00000514469 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
HMGXB3-205ENST00000514469 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
HMGXB3-205ENST00000514469 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
HMGXB3-205ENST00000514469 SETD1AO15047 1707 aaKnown RBP15.68■□□□□ 0.1
HMGXB3-205ENST00000514469 METP08581 1390 aa15.67■□□□□ 0.1
HMGXB3-205ENST00000514469 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
HMGXB3-205ENST00000514469 PPLO60437 1756 aa15.67■□□□□ 0.1
HMGXB3-205ENST00000514469 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
HMGXB3-205ENST00000514469 DCCP43146 1447 aa15.65■□□□□ 0.1
HMGXB3-205ENST00000514469 SETD5Q9C0A6 1442 aa15.65■□□□□ 0.1
HMGXB3-205ENST00000514469 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
HMGXB3-205ENST00000514469 FOXD1Q16676 465 aa15.64■□□□□ 0.09
HMGXB3-205ENST00000514469 SLAIN2Q9P270 581 aa15.64■□□□□ 0.09
HMGXB3-205ENST00000514469 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
HMGXB3-205ENST00000514469 SPATA31E1Q6ZUB1 1445 aa15.63■□□□□ 0.09
HMGXB3-205ENST00000514469 PRAG1Q86YV5 1406 aa15.63■□□□□ 0.09
HMGXB3-205ENST00000514469 MPHOSPH9Q99550 1183 aa15.63■□□□□ 0.09
HMGXB3-205ENST00000514469 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
HMGXB3-205ENST00000514469 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
HMGXB3-205ENST00000514469 PHLPP1O60346 1717 aa15.62■□□□□ 0.09
HMGXB3-205ENST00000514469 IFT172Q9UG01 1749 aa15.62■□□□□ 0.09
HMGXB3-205ENST00000514469 COL16A1Q07092 1604 aaPredicted RBP15.61■□□□□ 0.09
HMGXB3-205ENST00000514469 PTCH1Q13635 1447 aa15.61■□□□□ 0.09
HMGXB3-205ENST00000514469 C14orf37Q86TY3 774 aa15.61■□□□□ 0.09
HMGXB3-205ENST00000514469 CADPS2Q86UW7 1296 aa15.61■□□□□ 0.09
HMGXB3-205ENST00000514469 C19orf44Q9H6X5 657 aa15.61■□□□□ 0.09
HMGXB3-205ENST00000514469 AHDC1Q5TGY3 1603 aaPredicted RBP15.61■□□□□ 0.09
HMGXB3-205ENST00000514469 ADGRL3Q9HAR2 1447 aa15.6■□□□□ 0.09
HMGXB3-205ENST00000514469 NALCNQ8IZF0 1738 aa15.6■□□□□ 0.09
HMGXB3-205ENST00000514469 RAB3GAP2Q9H2M9 1393 aa15.6■□□□□ 0.09
HMGXB3-205ENST00000514469 SOCS7O14512 581 aa15.58■□□□□ 0.08
HMGXB3-205ENST00000514469 ATF3P18847 181 aa15.58■□□□□ 0.08
HMGXB3-205ENST00000514469 MST1RQ04912 1400 aa15.58■□□□□ 0.08
HMGXB3-205ENST00000514469 ANKRD30BQ9BXX2 1392 aa15.56■□□□□ 0.08
HMGXB3-205ENST00000514469 ASXL1Q8IXJ9 1541 aa15.56■□□□□ 0.08
HMGXB3-205ENST00000514469 ROBO2Q9HCK4 1378 aa15.55■□□□□ 0.08
HMGXB3-205ENST00000514469 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
HMGXB3-205ENST00000514469 PIK3C2GO75747 1445 aa15.54■□□□□ 0.08
HMGXB3-205ENST00000514469 JCADQ9P266 1359 aa15.54■□□□□ 0.08
HMGXB3-205ENST00000514469 NHSL1Q5SYE7 1610 aa15.54■□□□□ 0.08
HMGXB3-205ENST00000514469 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
HMGXB3-205ENST00000514469 BRINP3Q76B58 766 aa15.53■□□□□ 0.08
HMGXB3-205ENST00000514469 SHPRHQ149N8 1683 aa15.52■□□□□ 0.08
HMGXB3-205ENST00000514469 MYOM2P54296 1465 aa15.52■□□□□ 0.07
HMGXB3-205ENST00000514469 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.07
HMGXB3-205ENST00000514469 TECPR2O15040 1411 aa15.51■□□□□ 0.07
HMGXB3-205ENST00000514469 RGL3Q3MIN7 710 aa15.51■□□□□ 0.07
HMGXB3-205ENST00000514469 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
HMGXB3-205ENST00000514469 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
HMGXB3-205ENST00000514469 C1orf167Q5SNV9 1468 aa15.49■□□□□ 0.07
HMGXB3-205ENST00000514469 RGS17Q9UGC6 210 aaPredicted RBP15.49■□□□□ 0.07
HMGXB3-205ENST00000514469 LRP6O75581 1613 aa15.49■□□□□ 0.07
HMGXB3-205ENST00000514469 LAMC1P11047 1609 aa15.49■□□□□ 0.07
HMGXB3-205ENST00000514469 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
HMGXB3-205ENST00000514469 HRCP23327 699 aa15.47■□□□□ 0.07
HMGXB3-205ENST00000514469 SPATA31A6Q5VVP1 1343 aa15.46■□□□□ 0.07
HMGXB3-205ENST00000514469 ABCC11Q96J66 1382 aa15.45■□□□□ 0.06
HMGXB3-205ENST00000514469 YTHDC2Q9H6S0 1430 aaKnown RBP15.44■□□□□ 0.06
HMGXB3-205ENST00000514469 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
HMGXB3-205ENST00000514469 C14orf93Q9H972 538 aaKnown RBP15.41■□□□□ 0.06
HMGXB3-205ENST00000514469 PNPLA6Q8IY17 1366 aa15.4■□□□□ 0.06
HMGXB3-205ENST00000514469 TMEM132EQ6IEE7 984 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms