RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
GPBP1-208ENST00000514387 TRIM44Q96DX7 344 aaPredicted RBP11.17□□□□□ -0.62
GPBP1-208ENST00000514387 PHF14O94880 888 aa11.16□□□□□ -0.62
GPBP1-208ENST00000514387 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
GPBP1-208ENST00000514387 CHMP5Q9NZZ3 219 aa11.16□□□□□ -0.62
GPBP1-208ENST00000514387 KIF20AO95235 890 aa11.16□□□□□ -0.62
GPBP1-208ENST00000514387 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
GPBP1-208ENST00000514387 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
GPBP1-208ENST00000514387 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
GPBP1-208ENST00000514387 SKOR2Q2VWA4 1001 aaPredicted RBP11.15□□□□□ -0.62
GPBP1-208ENST00000514387 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
GPBP1-208ENST00000514387 NGEFQ8N5V2 710 aa11.15□□□□□ -0.62
GPBP1-208ENST00000514387 DAPK1P53355 1430 aa11.15□□□□□ -0.62
GPBP1-208ENST00000514387 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
GPBP1-208ENST00000514387 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
GPBP1-208ENST00000514387 WWC1Q8IX03 1113 aa11.15□□□□□ -0.62
GPBP1-208ENST00000514387 PZPP20742 1482 aa11.14□□□□□ -0.63
GPBP1-208ENST00000514387 HS1BP3Q53T59 392 aa11.14□□□□□ -0.63
GPBP1-208ENST00000514387 OFD1O75665 1012 aa11.14□□□□□ -0.63
GPBP1-208ENST00000514387 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
GPBP1-208ENST00000514387 TRAK2O60296 914 aa11.14□□□□□ -0.63
GPBP1-208ENST00000514387 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
GPBP1-208ENST00000514387 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 CGNL1Q0VF96 1302 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 PLIN1O60240 522 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 SETQ01105 290 aaPredicted RBP11.13□□□□□ -0.63
GPBP1-208ENST00000514387 CCDC173Q0VFZ6 552 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 PPP4R3BQ5MIZ7 849 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 CDCA7LQ96GN5 454 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
GPBP1-208ENST00000514387 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
GPBP1-208ENST00000514387 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 SLC52A1Q9NWF4 448 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 LAMC1P11047 1609 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 FAM193AP78312 1265 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 CEP120Q8N960 986 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 PPP1R9BQ96SB3 815 aa11.12□□□□□ -0.63
GPBP1-208ENST00000514387 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
GPBP1-208ENST00000514387 MAGI3Q5TCQ9 1506 aa11.11□□□□□ -0.63
GPBP1-208ENST00000514387 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
GPBP1-208ENST00000514387 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
GPBP1-208ENST00000514387 PLCD4Q9BRC7 762 aa11.11□□□□□ -0.63
GPBP1-208ENST00000514387 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
GPBP1-208ENST00000514387 ZNF521Q96K83 1311 aa11.1□□□□□ -0.63
GPBP1-208ENST00000514387 IBTKQ9P2D0 1353 aaPredicted RBP11.1□□□□□ -0.63
GPBP1-208ENST00000514387 DUSP27Q5VZP5 1158 aa11.1□□□□□ -0.63
GPBP1-208ENST00000514387 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
GPBP1-208ENST00000514387 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
GPBP1-208ENST00000514387 ADGRL2O95490 1459 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 KIAA1211Q6ZU35 1233 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 PANK2Q9BZ23 570 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 CHIC2Q9UKJ5 165 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 ABCC5O15440 1437 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 NESP48681 1621 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 CARD11Q9BXL7 1154 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 TRMT2AQ8IZ69 625 aaKnown RBP11.09□□□□□ -0.63
GPBP1-208ENST00000514387 TBC1D2Q9BYX2 928 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
GPBP1-208ENST00000514387 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
GPBP1-208ENST00000514387 C20orf194Q5TEA3 1177 aa11.08□□□□□ -0.64
GPBP1-208ENST00000514387 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
GPBP1-208ENST00000514387 SLKQ9H2G2 1235 aaPredicted RBP11.08□□□□□ -0.64
GPBP1-208ENST00000514387 PRDM10Q9NQV6 1147 aa11.08□□□□□ -0.64
GPBP1-208ENST00000514387 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
GPBP1-208ENST00000514387 PMFBP1Q8TBY8 1022 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 CSPP1Q1MSJ5 1256 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 MCM5P33992 734 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
GPBP1-208ENST00000514387 KDM5DQ9BY66 1539 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 DYNC1I1O14576 645 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 SKAP1Q86WV1 359 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 GTPBP4Q9BZE4 634 aaKnown RBP11.06□□□□□ -0.64
GPBP1-208ENST00000514387 NCOA3Q9Y6Q9 1424 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 ERBB4Q15303 1308 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 TMED8Q6PL24 325 aaPredicted RBP11.06□□□□□ -0.64
GPBP1-208ENST00000514387 FAM43BQ6ZT52 329 aaPredicted RBP11.06□□□□□ -0.64
GPBP1-208ENST00000514387 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
GPBP1-208ENST00000514387 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
GPBP1-208ENST00000514387 SLFN5Q08AF3 891 aa11.05□□□□□ -0.64
GPBP1-208ENST00000514387 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
GPBP1-208ENST00000514387 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
GPBP1-208ENST00000514387 COL17A1Q9UMD9 1497 aaPredicted RBP11.05□□□□□ -0.64
GPBP1-208ENST00000514387 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
GPBP1-208ENST00000514387 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
GPBP1-208ENST00000514387 GEMIN8Q9NWZ8 242 aaKnown RBP11.05□□□□□ -0.64
GPBP1-208ENST00000514387 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
GPBP1-208ENST00000514387 ZNF500O60304 480 aaPredicted RBP11.04□□□□□ -0.64
GPBP1-208ENST00000514387 MSNP26038 577 aaKnown RBP11.04□□□□□ -0.64
GPBP1-208ENST00000514387 ABCC2Q92887 1545 aa11.04□□□□□ -0.64
GPBP1-208ENST00000514387 ARHGAP31Q2M1Z3 1444 aa11.04□□□□□ -0.64
GPBP1-208ENST00000514387 LETM1O95202 739 aaPredicted RBP11.04□□□□□ -0.64
GPBP1-208ENST00000514387 ZSCAN20P17040 1043 aaPredicted RBP11.04□□□□□ -0.64
GPBP1-208ENST00000514387 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
GPBP1-208ENST00000514387 TNNT2P45379 298 aaPredicted RBP11.03□□□□□ -0.64
GPBP1-208ENST00000514387 RIPK4P57078 832 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms