RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	TARBP1	Q13395	1621 aa	Known RBP	14.05	□□□□□ -0.16
PDCD6-210	ENST00000513582	WDR62	O43379	1518 aa		14.05	□□□□□ -0.16
PDCD6-210	ENST00000513582	PANK1	Q8TE04	598 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	NLRP1	Q9C000	1473 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	UQCRHL	A0A096LP55	91 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	ZBTB7C	A1YPR0	619 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	UQCRH	P07919	91 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	ANP32B	Q92688	251 aa	Known RBP	14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	ABCC5	O15440	1437 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	BBX	Q8WY36	941 aa	Predicted RBP	14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	KDM5C	P41229	1560 aa		14.04	□□□□□ -0.16
PDCD6-210	ENST00000513582	RRP7A	Q9Y3A4	280 aa	Known RBP	14.03	□□□□□ -0.16
PDCD6-210	ENST00000513582	ADAMTS12	P58397	1594 aa		14.03	□□□□□ -0.16
PDCD6-210	ENST00000513582	NASP	P49321	788 aa	Predicted RBP	14.02	□□□□□ -0.16
PDCD6-210	ENST00000513582	XPC	Q01831	940 aa	Predicted RBP	14.02	□□□□□ -0.16
PDCD6-210	ENST00000513582	BLM	P54132	1417 aa	Predicted RBP	14.02	□□□□□ -0.16
PDCD6-210	ENST00000513582	MRC2	Q9UBG0	1479 aa		14.02	□□□□□ -0.16
PDCD6-210	ENST00000513582	PBRM1	Q86U86	1689 aa		14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	MAP7D2	Q96T17	732 aa		14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	BCL2L13	Q9BXK5	485 aa		14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	BCL11B	Q9C0K0	894 aa	Predicted RBP	14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	FOXD4L1	Q9NU39	408 aa		14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	ZNF608	Q9ULD9	1512 aa	Predicted RBP	14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	CLUAP1	Q96AJ1	413 aa		14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14.02	□□□□□ -0.17
PDCD6-210	ENST00000513582	ANKRD30A	Q9BXX3	1397 aa		14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	SMAP1	Q8IYB5	467 aa	Predicted RBP	14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	PER1	O15534	1290 aa	Predicted RBP	14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	KIAA0586	Q9BVV6	1533 aa		14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	CCDC173	Q0VFZ6	552 aa		14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	HSCB	Q8IWL3	235 aa		14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	ISY1	Q9ULR0	285 aa	Known RBP	14.01	□□□□□ -0.17
PDCD6-210	ENST00000513582	C22orf23	Q9BZE7	217 aa		14	□□□□□ -0.17
PDCD6-210	ENST00000513582	ZMYM4	Q5VZL5	1548 aa		14	□□□□□ -0.17
PDCD6-210	ENST00000513582	EIF3A	Q14152	1382 aa	Known RBP	14	□□□□□ -0.17
PDCD6-210	ENST00000513582	TNPO1	Q92973	898 aa	Known RBP	13.99	□□□□□ -0.17
PDCD6-210	ENST00000513582	MBD5	Q9P267	1494 aa		13.99	□□□□□ -0.17
PDCD6-210	ENST00000513582	TMF1	P82094	1093 aa		13.99	□□□□□ -0.17
PDCD6-210	ENST00000513582	GGT6	Q6P531	493 aa		13.99	□□□□□ -0.17
PDCD6-210	ENST00000513582	SLFN5	Q08AF3	891 aa		13.98	□□□□□ -0.17
PDCD6-210	ENST00000513582	IFT140	Q96RY7	1462 aa		13.98	□□□□□ -0.17
PDCD6-210	ENST00000513582	PDZRN3	Q9UPQ7	1066 aa		13.98	□□□□□ -0.17
PDCD6-210	ENST00000513582	PLB1	Q6P1J6	1458 aa		13.97	□□□□□ -0.17
PDCD6-210	ENST00000513582	TRO	Q12816	1431 aa	Predicted RBP	13.97	□□□□□ -0.17
PDCD6-210	ENST00000513582	DNMT1	P26358	1616 aa	Known RBP	13.97	□□□□□ -0.17
PDCD6-210	ENST00000513582	AFAP1	Q8N556	730 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	GBP4	Q96PP9	640 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	PLEKHH2	Q8IVE3	1493 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	CGNL1	Q0VF96	1302 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	KIF14	Q15058	1648 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	NUP153	P49790	1475 aa	Known RBP	13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	KIAA1107	Q9UPP5	1409 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	KIF3B	O15066	747 aa		13.95	□□□□□ -0.18
PDCD6-210	ENST00000513582	VIRMA	Q69YN4	1812 aa	Known RBP	13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	NCL	P19338	710 aa	Known RBP	13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	CARMIL2	Q6F5E8	1435 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	APAF1	O14727	1248 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	PPP1R9B	Q96SB3	815 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582		E9PCH4	1651 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	KIAA0556	O60303	1618 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	HSP90AB1	P08238	724 aa	Known RBP	13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	ZNF692	Q9BU19	519 aa	Predicted RBP	13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	PCDHB15	Q9Y5E8	787 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	ANKRD50	Q9ULJ7	1429 aa		13.94	□□□□□ -0.18
PDCD6-210	ENST00000513582	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	CHMP4B	Q9H444	224 aa	Known RBP	13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	STK26	Q9P289	416 aa		13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	RAPGEF6	Q8TEU7	1601 aa		13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	CAMSAP2	Q08AD1	1489 aa		13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	RALGAPB	Q86X10	1494 aa		13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	GTF2E1	P29083	439 aa	Predicted RBP	13.93	□□□□□ -0.18
PDCD6-210	ENST00000513582	DMTN	Q08495	405 aa		13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	JARID2	Q92833	1246 aa	Predicted RBP	13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	TNN	Q9UQP3	1299 aa		13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	DMRT2	Q9Y5R5	561 aa		13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	ZNF521	Q96K83	1311 aa		13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	DDX49	Q9Y6V7	483 aa	Known RBP	13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	DISP1	Q96F81	1524 aa		13.92	□□□□□ -0.18
PDCD6-210	ENST00000513582	TERF1	P54274	439 aa		13.91	□□□□□ -0.18
PDCD6-210	ENST00000513582	CBX1	P83916	185 aa		13.91	□□□□□ -0.18
PDCD6-210	ENST00000513582	PZP	P20742	1482 aa		13.91	□□□□□ -0.18
PDCD6-210	ENST00000513582	U2SURP	O15042	1029 aa	Known RBP	13.91	□□□□□ -0.18
PDCD6-210	ENST00000513582	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.91	□□□□□ -0.18
PDCD6-210	ENST00000513582	GRIN2A	Q12879	1464 aa		13.91	□□□□□ -0.18
PDCD6-210	ENST00000513582	PMFBP1	Q8TBY8	1022 aa		13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	TSC1	Q92574	1164 aa		13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	ZSCAN20	P17040	1043 aa	Predicted RBP	13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	DYNC1I1	O14576	645 aa		13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	MTERF4	Q7Z6M4	381 aa	Known RBP	13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	TRAK1	Q9UPV9	953 aa		13.9	□□□□□ -0.18
PDCD6-210	ENST00000513582	PTPRG	P23470	1445 aa		13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	PPP2R1A	P30153	589 aa		13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	PDE3A	Q14432	1141 aa		13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	PPP4R3B	Q5MIZ7	849 aa		13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	STAC3	Q96MF2	364 aa		13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	STAG3	Q9UJ98	1225 aa		13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	CCDC94	Q9BW85	323 aa	Predicted RBP	13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	NKTR	P30414	1462 aa	Known RBP	13.89	□□□□□ -0.19
PDCD6-210	ENST00000513582	PDIA4	P13667	645 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms