RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
RNF4-218ENST00000513284 BCANQ96GW7 911 aa17.84■□□□□ 0.45
RNF4-218ENST00000513284 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.44
RNF4-218ENST00000513284 CHD2O14647 1828 aaKnown RBP17.83■□□□□ 0.44
RNF4-218ENST00000513284 LMTK2Q8IWU2 1503 aa17.82■□□□□ 0.44
RNF4-218ENST00000513284 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
RNF4-218ENST00000513284 ZFYVE9O95405 1425 aa17.81■□□□□ 0.44
RNF4-218ENST00000513284 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
RNF4-218ENST00000513284 KANK1Q14678 1352 aa17.79■□□□□ 0.44
RNF4-218ENST00000513284 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
RNF4-218ENST00000513284 ADGRB3O60242 1522 aa17.79■□□□□ 0.44
RNF4-218ENST00000513284 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
RNF4-218ENST00000513284 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
RNF4-218ENST00000513284 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
RNF4-218ENST00000513284 AHDC1Q5TGY3 1603 aaPredicted RBP17.77■□□□□ 0.44
RNF4-218ENST00000513284 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.44
RNF4-218ENST00000513284 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.44
RNF4-218ENST00000513284 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.44
RNF4-218ENST00000513284 SHPRHQ149N8 1683 aa17.77■□□□□ 0.43
RNF4-218ENST00000513284 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
RNF4-218ENST00000513284 CADPS2Q86UW7 1296 aa17.76■□□□□ 0.43
RNF4-218ENST00000513284 AFF2P51816 1311 aa17.75■□□□□ 0.43
RNF4-218ENST00000513284 DIP2AQ14689 1571 aa17.75■□□□□ 0.43
RNF4-218ENST00000513284 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
RNF4-218ENST00000513284 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
RNF4-218ENST00000513284 RIMS2Q9UQ26 1411 aa17.74■□□□□ 0.43
RNF4-218ENST00000513284 DAPK1P53355 1430 aa17.73■□□□□ 0.43
RNF4-218ENST00000513284 ADAMTS13Q76LX8 1427 aa17.73■□□□□ 0.43
RNF4-218ENST00000513284 ATF3P18847 181 aa17.73■□□□□ 0.43
RNF4-218ENST00000513284 C14orf37Q86TY3 774 aa17.73■□□□□ 0.43
RNF4-218ENST00000513284 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
RNF4-218ENST00000513284 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
RNF4-218ENST00000513284 CROCC2H7BZ55 1655 aa17.72■□□□□ 0.43
RNF4-218ENST00000513284 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
RNF4-218ENST00000513284 QTRT2Q9H974 415 aaKnown RBP17.71■□□□□ 0.43
RNF4-218ENST00000513284 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
RNF4-218ENST00000513284 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
RNF4-218ENST00000513284 RGS12O14924 1447 aa17.7■□□□□ 0.42
RNF4-218ENST00000513284 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
RNF4-218ENST00000513284 PTPRUQ92729 1446 aa17.69■□□□□ 0.42
RNF4-218ENST00000513284 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
RNF4-218ENST00000513284 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
RNF4-218ENST00000513284 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
RNF4-218ENST00000513284 PTPN23Q9H3S7 1636 aa17.68■□□□□ 0.42
RNF4-218ENST00000513284 ANKRD30AQ9BXX3 1397 aa17.67■□□□□ 0.42
RNF4-218ENST00000513284 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.66■□□□□ 0.42
RNF4-218ENST00000513284 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
RNF4-218ENST00000513284 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
RNF4-218ENST00000513284 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
RNF4-218ENST00000513284 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
RNF4-218ENST00000513284 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.42
RNF4-218ENST00000513284 RPRD2Q5VT52 1461 aaKnown RBP17.64■□□□□ 0.41
RNF4-218ENST00000513284 LRRC59Q96AG4 307 aaKnown RBP17.64■□□□□ 0.41
RNF4-218ENST00000513284 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
RNF4-218ENST00000513284 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
RNF4-218ENST00000513284 MST1RQ04912 1400 aa17.61■□□□□ 0.41
RNF4-218ENST00000513284 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
RNF4-218ENST00000513284 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.41
RNF4-218ENST00000513284 DCCP43146 1447 aa17.58■□□□□ 0.41
RNF4-218ENST00000513284 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
RNF4-218ENST00000513284 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
RNF4-218ENST00000513284 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
RNF4-218ENST00000513284 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
RNF4-218ENST00000513284 EP400Q96L91 3159 aa17.56■□□□□ 0.4
RNF4-218ENST00000513284 SETBP1Q9Y6X0 1596 aa17.56■□□□□ 0.4
RNF4-218ENST00000513284 ZRANB1Q9UGI0 708 aa17.55■□□□□ 0.4
RNF4-218ENST00000513284 TRPM2O94759 1503 aa17.55■□□□□ 0.4
RNF4-218ENST00000513284 ATAD2Q6PL18 1390 aa17.54■□□□□ 0.4
RNF4-218ENST00000513284 UNC13BO14795 1591 aa17.53■□□□□ 0.4
RNF4-218ENST00000513284 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
RNF4-218ENST00000513284 METP08581 1390 aa17.53■□□□□ 0.4
RNF4-218ENST00000513284 USP21Q9UK80 565 aa17.52■□□□□ 0.4
RNF4-218ENST00000513284 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.39
RNF4-218ENST00000513284 NRXN3Q9Y4C0 1643 aa17.51■□□□□ 0.39
RNF4-218ENST00000513284 E9PCH4 1651 aa17.51■□□□□ 0.39
RNF4-218ENST00000513284 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
RNF4-218ENST00000513284 SOS2Q07890 1332 aaPredicted RBP17.49■□□□□ 0.39
RNF4-218ENST00000513284 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
RNF4-218ENST00000513284 ATRNO75882 1429 aa17.47■□□□□ 0.39
RNF4-218ENST00000513284 ADGRL3Q9HAR2 1447 aa17.47■□□□□ 0.39
RNF4-218ENST00000513284 C1orf167Q5SNV9 1468 aa17.46■□□□□ 0.39
RNF4-218ENST00000513284 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
RNF4-218ENST00000513284 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
RNF4-218ENST00000513284 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
RNF4-218ENST00000513284 LAMC1P11047 1609 aa17.43■□□□□ 0.38
RNF4-218ENST00000513284 APLP2Q06481 763 aa17.43■□□□□ 0.38
RNF4-218ENST00000513284 NALCNQ8IZF0 1738 aa17.42■□□□□ 0.38
RNF4-218ENST00000513284 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
RNF4-218ENST00000513284 FOXD1Q16676 465 aa17.42■□□□□ 0.38
RNF4-218ENST00000513284 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
RNF4-218ENST00000513284 IQGAP3Q86VI3 1631 aa17.39■□□□□ 0.37
RNF4-218ENST00000513284 NUP155O75694 1391 aa17.39■□□□□ 0.37
RNF4-218ENST00000513284 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
RNF4-218ENST00000513284 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
RNF4-218ENST00000513284 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
RNF4-218ENST00000513284 MYOM2P54296 1465 aa17.37■□□□□ 0.37
RNF4-218ENST00000513284 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
RNF4-218ENST00000513284 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
RNF4-218ENST00000513284 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
RNF4-218ENST00000513284 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms