RNA–Protein interactions for RNA: ENST00000513121.1

MATR3-221, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-221ENST00000513121 HFM1A2PYH4 1435 aa28.89■■■□□ 2.22
MATR3-221ENST00000513121 BCANQ96GW7 911 aa28.89■■■□□ 2.22
MATR3-221ENST00000513121 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.21
MATR3-221ENST00000513121 KCNA6P17658 529 aa28.88■■■□□ 2.21
MATR3-221ENST00000513121 ALKQ9UM73 1620 aa28.87■■■□□ 2.21
MATR3-221ENST00000513121 PLEKHG1Q9ULL1 1385 aa28.86■■■□□ 2.21
MATR3-221ENST00000513121 PPP1R15AO75807 674 aaPredicted RBP28.85■■■□□ 2.21
MATR3-221ENST00000513121 TRIM52Q96A61 297 aa28.85■■■□□ 2.21
MATR3-221ENST00000513121 HSPA1LP34931 641 aa28.84■■■□□ 2.21
MATR3-221ENST00000513121 HDGFP51858 240 aaKnown RBP28.84■■■□□ 2.21
MATR3-221ENST00000513121 RBM33Q96EV2 1170 aaKnown RBP28.83■■■□□ 2.21
MATR3-221ENST00000513121 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.82■■■□□ 2.2
MATR3-221ENST00000513121 MYO5BQ9ULV0 1848 aa28.81■■■□□ 2.2
MATR3-221ENST00000513121 TMEM94Q12767 1356 aa28.79■■■□□ 2.2
MATR3-221ENST00000513121 PROSER2Q86WR7 435 aaPredicted RBP28.77■■■□□ 2.2
MATR3-221ENST00000513121 TBX22Q9Y458 520 aa28.77■■■□□ 2.2
MATR3-221ENST00000513121 ADAMTS13Q76LX8 1427 aa28.77■■■□□ 2.2
MATR3-221ENST00000513121 SLC4A1APQ9BWU0 796 aaKnown RBP28.75■■■□□ 2.19
MATR3-221ENST00000513121 DISP3Q9P2K9 1392 aa28.73■■■□□ 2.19
MATR3-221ENST00000513121 FOXD1Q16676 465 aa28.71■■■□□ 2.19
MATR3-221ENST00000513121 ZNF326Q5BKZ1 582 aaKnown RBP28.71■■■□□ 2.19
MATR3-221ENST00000513121 SPHKAPQ2M3C7 1700 aa28.7■■■□□ 2.19
MATR3-221ENST00000513121 XIRP1Q702N8 1843 aaKnown RBP28.69■■■□□ 2.18
MATR3-221ENST00000513121 NWD1Q149M9 1564 aa28.68■■■□□ 2.18
MATR3-221ENST00000513121 TRPM2O94759 1503 aa28.68■■■□□ 2.18
MATR3-221ENST00000513121 CLTCL1P53675 1640 aa28.67■■■□□ 2.18
MATR3-221ENST00000513121 NKTRP30414 1462 aaKnown RBP28.66■■■□□ 2.18
MATR3-221ENST00000513121 ILDR2Q71H61 639 aa28.63■■■□□ 2.17
MATR3-221ENST00000513121 PTPRUQ92729 1446 aa28.62■■■□□ 2.17
MATR3-221ENST00000513121 MPHOSPH9Q99550 1183 aa28.62■■■□□ 2.17
MATR3-221ENST00000513121 AMOTL2Q9Y2J4 779 aa28.6■■■□□ 2.17
MATR3-221ENST00000513121 PIK3R4Q99570 1358 aa28.6■■■□□ 2.17
MATR3-221ENST00000513121 CHD2O14647 1828 aaKnown RBP28.58■■■□□ 2.17
MATR3-221ENST00000513121 NEXMIFQ5QGS0 1516 aa28.57■■■□□ 2.16
MATR3-221ENST00000513121 METP08581 1390 aa28.56■■■□□ 2.16
MATR3-221ENST00000513121 FAM135BQ49AJ0 1406 aa28.56■■■□□ 2.16
MATR3-221ENST00000513121 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
MATR3-221ENST00000513121 DIP2AQ14689 1571 aa28.55■■■□□ 2.16
MATR3-221ENST00000513121 MSH6P52701 1360 aa28.55■■■□□ 2.16
MATR3-221ENST00000513121 SETD5Q9C0A6 1442 aa28.54■■■□□ 2.16
MATR3-221ENST00000513121 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
MATR3-221ENST00000513121 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
MATR3-221ENST00000513121 C14orf37Q86TY3 774 aa28.49■■■□□ 2.15
MATR3-221ENST00000513121 NCOA3Q9Y6Q9 1424 aa28.49■■■□□ 2.15
MATR3-221ENST00000513121 RPGRIP1LQ68CZ1 1315 aa28.48■■■□□ 2.15
MATR3-221ENST00000513121 VGFO15240 615 aaPredicted RBP28.48■■■□□ 2.15
MATR3-221ENST00000513121 RAB3GAP2Q9H2M9 1393 aa28.47■■■□□ 2.15
MATR3-221ENST00000513121 C19orf44Q9H6X5 657 aa28.46■■■□□ 2.15
MATR3-221ENST00000513121 KIF1BO60333 1816 aa28.44■■■□□ 2.14
MATR3-221ENST00000513121 RGL3Q3MIN7 710 aa28.44■■■□□ 2.14
MATR3-221ENST00000513121 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
MATR3-221ENST00000513121 MED1Q15648 1581 aaPredicted RBP28.42■■■□□ 2.14
MATR3-221ENST00000513121 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
MATR3-221ENST00000513121 ADGRF5Q8IZF2 1346 aa28.4■■■□□ 2.14
MATR3-221ENST00000513121 ROBO1Q9Y6N7 1651 aa28.39■■■□□ 2.14
MATR3-221ENST00000513121 ATF3P18847 181 aa28.39■■■□□ 2.14
MATR3-221ENST00000513121 CADPS2Q86UW7 1296 aa28.39■■■□□ 2.14
MATR3-221ENST00000513121 XRN1Q8IZH2 1706 aaKnown RBP28.39■■■□□ 2.14
MATR3-221ENST00000513121 ACIN1Q9UKV3 1341 aaKnown RBP28.36■■■□□ 2.13
MATR3-221ENST00000513121 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.34■■■□□ 2.13
MATR3-221ENST00000513121 ROBO2Q9HCK4 1378 aa28.33■■■□□ 2.13
MATR3-221ENST00000513121 BRINP3Q76B58 766 aa28.29■■■□□ 2.12
MATR3-221ENST00000513121 PPLO60437 1756 aa28.29■■■□□ 2.12
MATR3-221ENST00000513121 SETD1AO15047 1707 aaKnown RBP28.28■■■□□ 2.12
MATR3-221ENST00000513121 ANKRD30BQ9BXX2 1392 aa28.27■■■□□ 2.12
MATR3-221ENST00000513121 PHF23Q9BUL5 403 aaPredicted RBP28.27■■■□□ 2.12
MATR3-221ENST00000513121 DCCP43146 1447 aa28.26■■■□□ 2.12
MATR3-221ENST00000513121 ADGRL3Q9HAR2 1447 aa28.26■■■□□ 2.12
MATR3-221ENST00000513121 SOCS7O14512 581 aa28.26■■■□□ 2.11
MATR3-221ENST00000513121 HRCP23327 699 aa28.25■■■□□ 2.11
MATR3-221ENST00000513121 RGS17Q9UGC6 210 aaPredicted RBP28.25■■■□□ 2.11
MATR3-221ENST00000513121 MST1RQ04912 1400 aa28.25■■■□□ 2.11
MATR3-221ENST00000513121 PTCH1Q13635 1447 aa28.25■■■□□ 2.11
MATR3-221ENST00000513121 TMEM132EQ6IEE7 984 aa28.24■■■□□ 2.11
MATR3-221ENST00000513121 PRAG1Q86YV5 1406 aa28.22■■■□□ 2.11
MATR3-221ENST00000513121 STK26Q9P289 416 aa28.21■■■□□ 2.11
MATR3-221ENST00000513121 JCADQ9P266 1359 aa28.2■■■□□ 2.1
MATR3-221ENST00000513121 PIK3C2GO75747 1445 aa28.19■■■□□ 2.1
MATR3-221ENST00000513121 DDX17Q92841 729 aaKnown RBP28.18■■■□□ 2.1
MATR3-221ENST00000513121 PHLPP1O60346 1717 aa28.18■■■□□ 2.1
MATR3-221ENST00000513121 COL16A1Q07092 1604 aaPredicted RBP28.18■■■□□ 2.1
MATR3-221ENST00000513121 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
MATR3-221ENST00000513121 C14orf93Q9H972 538 aaKnown RBP28.16■■■□□ 2.1
MATR3-221ENST00000513121 ASXL1Q8IXJ9 1541 aa28.16■■■□□ 2.1
MATR3-221ENST00000513121 LRPPRCP42704 1394 aaKnown RBP28.15■■■□□ 2.1
MATR3-221ENST00000513121 AHDC1Q5TGY3 1603 aaPredicted RBP28.15■■■□□ 2.1
MATR3-221ENST00000513121 CFAP70Q5T0N1 1121 aa28.15■■■□□ 2.1
MATR3-221ENST00000513121 NALCNQ8IZF0 1738 aa28.15■■■□□ 2.1
MATR3-221ENST00000513121 IFT172Q9UG01 1749 aa28.15■■■□□ 2.1
MATR3-221ENST00000513121 C1orf167Q5SNV9 1468 aa28.13■■■□□ 2.09
MATR3-221ENST00000513121 NRXN1Q9ULB1 1477 aa28.13■■■□□ 2.09
MATR3-221ENST00000513121 ABCC11Q96J66 1382 aa28.12■■■□□ 2.09
MATR3-221ENST00000513121 PLEKHH1Q9ULM0 1364 aa28.12■■■□□ 2.09
MATR3-221ENST00000513121 ORAI2Q96SN7 254 aa28.12■■■□□ 2.09
MATR3-221ENST00000513121 TECPR2O15040 1411 aa28.1■■■□□ 2.09
MATR3-221ENST00000513121 MYOM2P54296 1465 aa28.08■■■□□ 2.09
MATR3-221ENST00000513121 POTEAQ6S8J7 498 aa28.08■■■□□ 2.09
MATR3-221ENST00000513121 YTHDC2Q9H6S0 1430 aaKnown RBP28.08■■■□□ 2.09
MATR3-221ENST00000513121 KDM2AQ9Y2K7 1162 aa28.06■■■□□ 2.08
MATR3-221ENST00000513121 LRP6O75581 1613 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms