RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 SLC26A8Q96RN1 970 aa19.14■□□□□ 0.65
UBE2D3-231ENST00000513098 E9PCH4 1651 aa19.14■□□□□ 0.65
UBE2D3-231ENST00000513098 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
UBE2D3-231ENST00000513098 PLEKHG1Q9ULL1 1385 aa19.13■□□□□ 0.65
UBE2D3-231ENST00000513098 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
UBE2D3-231ENST00000513098 TBX22Q9Y458 520 aa19.11■□□□□ 0.65
UBE2D3-231ENST00000513098 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
UBE2D3-231ENST00000513098 TMEM94Q12767 1356 aa19.09■□□□□ 0.65
UBE2D3-231ENST00000513098 MYO5BQ9ULV0 1848 aa19.09■□□□□ 0.65
UBE2D3-231ENST00000513098 PROSER2Q86WR7 435 aaPredicted RBP19.08■□□□□ 0.64
UBE2D3-231ENST00000513098 SOCS7O14512 581 aa19.07■□□□□ 0.64
UBE2D3-231ENST00000513098 PPP1R15AO75807 674 aaPredicted RBP19.07■□□□□ 0.64
UBE2D3-231ENST00000513098 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
UBE2D3-231ENST00000513098 FAM135BQ49AJ0 1406 aa19.07■□□□□ 0.64
UBE2D3-231ENST00000513098 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
UBE2D3-231ENST00000513098 BCANQ96GW7 911 aa19.06■□□□□ 0.64
UBE2D3-231ENST00000513098 CHGAP10645 457 aaKnown RBP19.04■□□□□ 0.64
UBE2D3-231ENST00000513098 NAIPQ13075 1403 aa19.04■□□□□ 0.64
UBE2D3-231ENST00000513098 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
UBE2D3-231ENST00000513098 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
UBE2D3-231ENST00000513098 ADAMTS13Q76LX8 1427 aa19.02■□□□□ 0.64
UBE2D3-231ENST00000513098 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.64
UBE2D3-231ENST00000513098 MED1Q15648 1581 aaPredicted RBP18.99■□□□□ 0.63
UBE2D3-231ENST00000513098 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
UBE2D3-231ENST00000513098 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
UBE2D3-231ENST00000513098 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
UBE2D3-231ENST00000513098 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
UBE2D3-231ENST00000513098 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
UBE2D3-231ENST00000513098 MSH6P52701 1360 aa18.97■□□□□ 0.63
UBE2D3-231ENST00000513098 SLAIN2Q9P270 581 aa18.97■□□□□ 0.63
UBE2D3-231ENST00000513098 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
UBE2D3-231ENST00000513098 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
UBE2D3-231ENST00000513098 TRPM2O94759 1503 aa18.92■□□□□ 0.62
UBE2D3-231ENST00000513098 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
UBE2D3-231ENST00000513098 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
UBE2D3-231ENST00000513098 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
UBE2D3-231ENST00000513098 ROBO1Q9Y6N7 1651 aa18.9■□□□□ 0.62
UBE2D3-231ENST00000513098 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
UBE2D3-231ENST00000513098 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
UBE2D3-231ENST00000513098 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
UBE2D3-231ENST00000513098 CLTCL1P53675 1640 aa18.89■□□□□ 0.61
UBE2D3-231ENST00000513098 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
UBE2D3-231ENST00000513098 NRXN3Q9Y4C0 1643 aa18.88■□□□□ 0.61
UBE2D3-231ENST00000513098 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
UBE2D3-231ENST00000513098 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
UBE2D3-231ENST00000513098 VGFO15240 615 aaPredicted RBP18.86■□□□□ 0.61
UBE2D3-231ENST00000513098 NEXMIFQ5QGS0 1516 aa18.85■□□□□ 0.61
UBE2D3-231ENST00000513098 METP08581 1390 aa18.85■□□□□ 0.61
UBE2D3-231ENST00000513098 ATF3P18847 181 aa18.85■□□□□ 0.61
UBE2D3-231ENST00000513098 C14orf37Q86TY3 774 aa18.85■□□□□ 0.61
UBE2D3-231ENST00000513098 KIF1BO60333 1816 aa18.85■□□□□ 0.61
UBE2D3-231ENST00000513098 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
UBE2D3-231ENST00000513098 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
UBE2D3-231ENST00000513098 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
UBE2D3-231ENST00000513098 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.6
UBE2D3-231ENST00000513098 DCCP43146 1447 aa18.83■□□□□ 0.6
UBE2D3-231ENST00000513098 JCADQ9P266 1359 aa18.8■□□□□ 0.6
UBE2D3-231ENST00000513098 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
UBE2D3-231ENST00000513098 PHLPP1O60346 1717 aa18.77■□□□□ 0.6
UBE2D3-231ENST00000513098 BRINP3Q76B58 766 aa18.76■□□□□ 0.59
UBE2D3-231ENST00000513098 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
UBE2D3-231ENST00000513098 COL16A1Q07092 1604 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-231ENST00000513098 AHDC1Q5TGY3 1603 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-231ENST00000513098 FOXD1Q16676 465 aa18.75■□□□□ 0.59
UBE2D3-231ENST00000513098 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
UBE2D3-231ENST00000513098 SPATA31A6Q5VVP1 1343 aa18.74■□□□□ 0.59
UBE2D3-231ENST00000513098 MST1RQ04912 1400 aa18.73■□□□□ 0.59
UBE2D3-231ENST00000513098 PTCH1Q13635 1447 aa18.73■□□□□ 0.59
UBE2D3-231ENST00000513098 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
UBE2D3-231ENST00000513098 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
UBE2D3-231ENST00000513098 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
UBE2D3-231ENST00000513098 PPLO60437 1756 aa18.71■□□□□ 0.59
UBE2D3-231ENST00000513098 POTEAQ6S8J7 498 aa18.7■□□□□ 0.58
UBE2D3-231ENST00000513098 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
UBE2D3-231ENST00000513098 ANKRD30BQ9BXX2 1392 aa18.69■□□□□ 0.58
UBE2D3-231ENST00000513098 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
UBE2D3-231ENST00000513098 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
UBE2D3-231ENST00000513098 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
UBE2D3-231ENST00000513098 LRRC59Q96AG4 307 aaKnown RBP18.66■□□□□ 0.58
UBE2D3-231ENST00000513098 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
UBE2D3-231ENST00000513098 RGL3Q3MIN7 710 aa18.65■□□□□ 0.58
UBE2D3-231ENST00000513098 NALCNQ8IZF0 1738 aa18.64■□□□□ 0.57
UBE2D3-231ENST00000513098 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
UBE2D3-231ENST00000513098 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
UBE2D3-231ENST00000513098 HRCP23327 699 aa18.62■□□□□ 0.57
UBE2D3-231ENST00000513098 LRP6O75581 1613 aa18.62■□□□□ 0.57
UBE2D3-231ENST00000513098 TECPR2O15040 1411 aa18.61■□□□□ 0.57
UBE2D3-231ENST00000513098 ABCC11Q96J66 1382 aa18.61■□□□□ 0.57
UBE2D3-231ENST00000513098 IFT172Q9UG01 1749 aa18.6■□□□□ 0.57
UBE2D3-231ENST00000513098 PIK3C2GO75747 1445 aa18.6■□□□□ 0.57
UBE2D3-231ENST00000513098 LRPPRCP42704 1394 aaKnown RBP18.6■□□□□ 0.57
UBE2D3-231ENST00000513098 ZNF772Q68DY9 489 aaPredicted RBP18.6■□□□□ 0.57
UBE2D3-231ENST00000513098 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
UBE2D3-231ENST00000513098 LAMC1P11047 1609 aa18.6■□□□□ 0.57
UBE2D3-231ENST00000513098 RAB3GAP2Q9H2M9 1393 aa18.59■□□□□ 0.57
UBE2D3-231ENST00000513098 SOS2Q07890 1332 aaPredicted RBP18.58■□□□□ 0.57
UBE2D3-231ENST00000513098 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
UBE2D3-231ENST00000513098 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
UBE2D3-231ENST00000513098 C14orf93Q9H972 538 aaKnown RBP18.58■□□□□ 0.56
UBE2D3-231ENST00000513098 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms