RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 PDE3BQ13370 1112 aa8.96□□□□□ -0.97
KDM3B-207ENST00000510866 CFAP70Q5T0N1 1121 aa8.96□□□□□ -0.97
KDM3B-207ENST00000510866 GGNBP2Q9H3C7 697 aa8.96□□□□□ -0.97
KDM3B-207ENST00000510866 CDK13Q14004 1512 aaKnown RBP8.96□□□□□ -0.97
KDM3B-207ENST00000510866 SUPT6HQ7KZ85 1726 aaKnown RBP8.96□□□□□ -0.98
KDM3B-207ENST00000510866 NEXNQ0ZGT2 675 aa8.96□□□□□ -0.98
KDM3B-207ENST00000510866 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.96□□□□□ -0.98
KDM3B-207ENST00000510866 CUL7Q14999 1698 aa8.96□□□□□ -0.98
KDM3B-207ENST00000510866 PRAM1Q96QH2 718 aa8.96□□□□□ -0.98
KDM3B-207ENST00000510866 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.98
KDM3B-207ENST00000510866 CD109Q6YHK3 1445 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 HSP90B1P14625 803 aaKnown RBP8.95□□□□□ -0.98
KDM3B-207ENST00000510866 RIPK4P57078 832 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 BCL2L13Q9BXK5 485 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 NUTM2BA6NNL0 878 aaPredicted RBP8.95□□□□□ -0.98
KDM3B-207ENST00000510866 NUTM2EB1AL46 878 aaPredicted RBP8.95□□□□□ -0.98
KDM3B-207ENST00000510866 HMOX1P09601 288 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 NUTM2AQ8IVF1 878 aaPredicted RBP8.95□□□□□ -0.98
KDM3B-207ENST00000510866 PIP4K2BP78356 416 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 GRIN2AQ12879 1464 aa8.95□□□□□ -0.98
KDM3B-207ENST00000510866 TOMM22Q9NS69 142 aa8.94□□□□□ -0.98
KDM3B-207ENST00000510866 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
KDM3B-207ENST00000510866 GOLGA6L6A8MZA4 724 aa8.94□□□□□ -0.98
KDM3B-207ENST00000510866 E9PSI1 815 aa8.94□□□□□ -0.98
KDM3B-207ENST00000510866 STRN4Q9NRL3 753 aa8.94□□□□□ -0.98
KDM3B-207ENST00000510866 C9orf78Q9NZ63 289 aaPredicted RBP8.93□□□□□ -0.98
KDM3B-207ENST00000510866 APAF1O14727 1248 aa8.93□□□□□ -0.98
KDM3B-207ENST00000510866 ARHGEF11O15085 1522 aa8.93□□□□□ -0.98
KDM3B-207ENST00000510866 SLC52A1Q9NWF4 448 aa8.93□□□□□ -0.98
KDM3B-207ENST00000510866 PRKRIP1Q9H875 184 aaPredicted RBP8.93□□□□□ -0.98
KDM3B-207ENST00000510866 TSPYL4Q9UJ04 414 aa8.93□□□□□ -0.98
KDM3B-207ENST00000510866 EPRSP07814 1512 aaKnown RBP8.93□□□□□ -0.98
KDM3B-207ENST00000510866 URB2Q14146 1524 aaKnown RBP8.93□□□□□ -0.98
KDM3B-207ENST00000510866 DDX58O95786 925 aaKnown RBP8.92□□□□□ -0.98
KDM3B-207ENST00000510866 MFAP1P55081 439 aaKnown RBP8.92□□□□□ -0.98
KDM3B-207ENST00000510866 SLC26A8Q96RN1 970 aa8.92□□□□□ -0.98
KDM3B-207ENST00000510866 FBXW7Q969H0 707 aa8.92□□□□□ -0.98
KDM3B-207ENST00000510866 DAPK1P53355 1430 aa8.92□□□□□ -0.98
KDM3B-207ENST00000510866 ERBINQ96RT1 1412 aa8.92□□□□□ -0.98
KDM3B-207ENST00000510866 TIAM1Q13009 1591 aa8.92□□□□□ -0.98
KDM3B-207ENST00000510866 KIF14Q15058 1648 aa8.91□□□□□ -0.98
KDM3B-207ENST00000510866 ZKSCAN2Q63HK3 967 aa8.91□□□□□ -0.98
KDM3B-207ENST00000510866 CDK19Q9BWU1 502 aa8.91□□□□□ -0.98
KDM3B-207ENST00000510866 HFM1A2PYH4 1435 aa8.91□□□□□ -0.98
KDM3B-207ENST00000510866 RUNDC1Q96C34 613 aa8.91□□□□□ -0.98
KDM3B-207ENST00000510866 TCERG1O14776 1098 aaKnown RBP8.91□□□□□ -0.98
KDM3B-207ENST00000510866 PLB1Q6P1J6 1458 aa8.91□□□□□ -0.98
KDM3B-207ENST00000510866 NOP58Q9Y2X3 529 aaKnown RBP8.91□□□□□ -0.98
KDM3B-207ENST00000510866 SMG6Q86US8 1419 aaKnown RBP8.91□□□□□ -0.98
KDM3B-207ENST00000510866 KIAA1107Q9UPP5 1409 aa8.9□□□□□ -0.98
KDM3B-207ENST00000510866 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.98
KDM3B-207ENST00000510866 NOL10Q9BSC4 688 aaKnown RBP8.9□□□□□ -0.98
KDM3B-207ENST00000510866 ADGRL1O94910 1474 aa8.9□□□□□ -0.99
KDM3B-207ENST00000510866 KIF7Q2M1P5 1343 aa8.9□□□□□ -0.99
KDM3B-207ENST00000510866 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
KDM3B-207ENST00000510866 VPS37DQ86XT2 251 aa8.89□□□□□ -0.99
KDM3B-207ENST00000510866 RILPL2Q969X0 211 aa8.89□□□□□ -0.99
KDM3B-207ENST00000510866 TRIM34Q9BYJ4 488 aa8.89□□□□□ -0.99
KDM3B-207ENST00000510866 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
KDM3B-207ENST00000510866 CCDC7Q96M83 1385 aa8.89□□□□□ -0.99
KDM3B-207ENST00000510866 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
KDM3B-207ENST00000510866 ANKRD45Q5TZF3 282 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 RTEL1-TNFRSF6BF6WH68 1400 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 PCF11O94913 1555 aaKnown RBP8.88□□□□□ -0.99
KDM3B-207ENST00000510866 GNAI1P63096 354 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 SF3B2Q13435 895 aaKnown RBP8.88□□□□□ -0.99
KDM3B-207ENST00000510866 RIC3Q7Z5B4 369 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 CCDC141Q6ZP82 1450 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 PLIN1O60240 522 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
KDM3B-207ENST00000510866 PLEKHO1Q53GL0 409 aaPredicted RBP8.88□□□□□ -0.99
KDM3B-207ENST00000510866 RBM42Q9BTD8 480 aaKnown RBP8.88□□□□□ -0.99
KDM3B-207ENST00000510866 VPS53Q5VIR6 699 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 AMOTL1Q8IY63 956 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 RBM33Q96EV2 1170 aaKnown RBP8.87□□□□□ -0.99
KDM3B-207ENST00000510866 CABP1Q9NZU7 370 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 RPGRIP1LQ68CZ1 1315 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 TATP17735 454 aaPredicted RBP8.87□□□□□ -0.99
KDM3B-207ENST00000510866 NRDCO43847 1150 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 HTATSF1O43719 755 aaKnown RBP8.87□□□□□ -0.99
KDM3B-207ENST00000510866 MTHFSP49914 203 aa8.87□□□□□ -0.99
KDM3B-207ENST00000510866 XPCQ01831 940 aaPredicted RBP8.87□□□□□ -0.99
KDM3B-207ENST00000510866 API5Q9BZZ5 524 aaKnown RBP8.87□□□□□ -0.99
KDM3B-207ENST00000510866 CAMSAP2Q08AD1 1489 aa8.86□□□□□ -0.99
KDM3B-207ENST00000510866 RAD21O60216 631 aa8.86□□□□□ -0.99
KDM3B-207ENST00000510866 NCBP3Q53F19 620 aaKnown RBP8.86□□□□□ -0.99
KDM3B-207ENST00000510866 ZNF692Q9BU19 519 aaPredicted RBP8.86□□□□□ -0.99
KDM3B-207ENST00000510866 GAS2L2Q8NHY3 880 aa8.86□□□□□ -0.99
KDM3B-207ENST00000510866 COG6Q9Y2V7 657 aa8.86□□□□□ -0.99
KDM3B-207ENST00000510866 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
KDM3B-207ENST00000510866 ROCK1Q13464 1354 aa8.85□□□□□ -0.99
KDM3B-207ENST00000510866 IFIT2P09913 472 aaKnown RBP8.85□□□□□ -0.99
KDM3B-207ENST00000510866 RASSF8Q8NHQ8 419 aa8.85□□□□□ -0.99
KDM3B-207ENST00000510866 G3BP1Q13283 466 aaKnown RBP eCLIP8.85□□□□□ -0.995e-8■■□□□ 12.5
KDM3B-207ENST00000510866 LRRFIP1Q32MZ4 808 aaKnown RBP8.85□□□□□ -0.99
KDM3B-207ENST00000510866 DRC7Q8IY82 874 aa8.85□□□□□ -0.99
KDM3B-207ENST00000510866 MARCH6O60337 910 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms