RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
RNF4-212ENST00000509258 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.27
RNF4-212ENST00000509258 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
RNF4-212ENST00000509258 NKTRP30414 1462 aaKnown RBP16.76■□□□□ 0.27
RNF4-212ENST00000509258 TMEM131LA2VDJ0 1609 aa16.76■□□□□ 0.27
RNF4-212ENST00000509258 KCNA6P17658 529 aa16.75■□□□□ 0.27
RNF4-212ENST00000509258 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
RNF4-212ENST00000509258 NWD1Q149M9 1564 aa16.75■□□□□ 0.27
RNF4-212ENST00000509258 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
RNF4-212ENST00000509258 ZFYVE9O95405 1425 aa16.71■□□□□ 0.27
RNF4-212ENST00000509258 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
RNF4-212ENST00000509258 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
RNF4-212ENST00000509258 PROSER2Q86WR7 435 aaPredicted RBP16.7■□□□□ 0.26
RNF4-212ENST00000509258 BCANQ96GW7 911 aa16.7■□□□□ 0.26
RNF4-212ENST00000509258 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
RNF4-212ENST00000509258 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
RNF4-212ENST00000509258 NUP155O75694 1391 aa16.68■□□□□ 0.26
RNF4-212ENST00000509258 MSH6P52701 1360 aa16.68■□□□□ 0.26
RNF4-212ENST00000509258 HDGFP51858 240 aaKnown RBP16.68■□□□□ 0.26
RNF4-212ENST00000509258 RIMS2Q9UQ26 1411 aa16.68■□□□□ 0.26
RNF4-212ENST00000509258 CHD2O14647 1828 aaKnown RBP16.67■□□□□ 0.26
RNF4-212ENST00000509258 NAIPQ13075 1403 aa16.67■□□□□ 0.26
RNF4-212ENST00000509258 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
RNF4-212ENST00000509258 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
RNF4-212ENST00000509258 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
RNF4-212ENST00000509258 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
RNF4-212ENST00000509258 DIP2AQ14689 1571 aa16.62■□□□□ 0.25
RNF4-212ENST00000509258 NRXN3Q9Y4C0 1643 aa16.61■□□□□ 0.25
RNF4-212ENST00000509258 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
RNF4-212ENST00000509258 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
RNF4-212ENST00000509258 TBX22Q9Y458 520 aa16.61■□□□□ 0.25
RNF4-212ENST00000509258 NCOA3Q9Y6Q9 1424 aa16.61■□□□□ 0.25
RNF4-212ENST00000509258 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
RNF4-212ENST00000509258 PIK3R4Q99570 1358 aa16.59■□□□□ 0.25
RNF4-212ENST00000509258 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
RNF4-212ENST00000509258 HFM1A2PYH4 1435 aa16.58■□□□□ 0.24
RNF4-212ENST00000509258 KIF1BO60333 1816 aa16.57■□□□□ 0.24
RNF4-212ENST00000509258 PHLPP1O60346 1717 aa16.57■□□□□ 0.24
RNF4-212ENST00000509258 JCADQ9P266 1359 aa16.57■□□□□ 0.24
RNF4-212ENST00000509258 TRPM2O94759 1503 aa16.56■□□□□ 0.24
RNF4-212ENST00000509258 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
RNF4-212ENST00000509258 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
RNF4-212ENST00000509258 COL16A1Q07092 1604 aaPredicted RBP16.54■□□□□ 0.24
RNF4-212ENST00000509258 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
RNF4-212ENST00000509258 POTEAQ6S8J7 498 aa16.52■□□□□ 0.24
RNF4-212ENST00000509258 C19orf44Q9H6X5 657 aa16.52■□□□□ 0.24
RNF4-212ENST00000509258 PTPRUQ92729 1446 aa16.52■□□□□ 0.23
RNF4-212ENST00000509258 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.51■□□□□ 0.23
RNF4-212ENST00000509258 ATF3P18847 181 aa16.51■□□□□ 0.23
RNF4-212ENST00000509258 AHDC1Q5TGY3 1603 aaPredicted RBP16.51■□□□□ 0.23
RNF4-212ENST00000509258 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
RNF4-212ENST00000509258 SETD1AO15047 1707 aaKnown RBP16.5■□□□□ 0.23
RNF4-212ENST00000509258 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
RNF4-212ENST00000509258 DCCP43146 1447 aa16.5■□□□□ 0.23
RNF4-212ENST00000509258 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
RNF4-212ENST00000509258 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
RNF4-212ENST00000509258 PPLO60437 1756 aa16.48■□□□□ 0.23
RNF4-212ENST00000509258 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
RNF4-212ENST00000509258 LRP6O75581 1613 aa16.46■□□□□ 0.23
RNF4-212ENST00000509258 FOXD1Q16676 465 aa16.46■□□□□ 0.23
RNF4-212ENST00000509258 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
RNF4-212ENST00000509258 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
RNF4-212ENST00000509258 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
RNF4-212ENST00000509258 METP08581 1390 aa16.43■□□□□ 0.22
RNF4-212ENST00000509258 BRINP3Q76B58 766 aa16.43■□□□□ 0.22
RNF4-212ENST00000509258 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
RNF4-212ENST00000509258 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
RNF4-212ENST00000509258 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
RNF4-212ENST00000509258 NALCNQ8IZF0 1738 aa16.42■□□□□ 0.22
RNF4-212ENST00000509258 ZNF772Q68DY9 489 aaPredicted RBP16.41■□□□□ 0.22
RNF4-212ENST00000509258 MST1RQ04912 1400 aa16.41■□□□□ 0.22
RNF4-212ENST00000509258 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
RNF4-212ENST00000509258 SETD5Q9C0A6 1442 aa16.38■□□□□ 0.21
RNF4-212ENST00000509258 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
RNF4-212ENST00000509258 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
RNF4-212ENST00000509258 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
RNF4-212ENST00000509258 SPATA31E1Q6ZUB1 1445 aa16.35■□□□□ 0.21
RNF4-212ENST00000509258 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
RNF4-212ENST00000509258 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
RNF4-212ENST00000509258 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
RNF4-212ENST00000509258 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.2
RNF4-212ENST00000509258 PRAG1Q86YV5 1406 aa16.33■□□□□ 0.2
RNF4-212ENST00000509258 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
RNF4-212ENST00000509258 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
RNF4-212ENST00000509258 RAB3GAP2Q9H2M9 1393 aa16.31■□□□□ 0.2
RNF4-212ENST00000509258 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
RNF4-212ENST00000509258 PNPLA6Q8IY17 1366 aa16.3■□□□□ 0.2
RNF4-212ENST00000509258 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
RNF4-212ENST00000509258 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
RNF4-212ENST00000509258 ADGRF5Q8IZF2 1346 aa16.3■□□□□ 0.2
RNF4-212ENST00000509258 RXRBP28702 533 aa16.3■□□□□ 0.2
RNF4-212ENST00000509258 CCDC144AA2RUR9 1427 aa16.29■□□□□ 0.2
RNF4-212ENST00000509258 AFF2P51816 1311 aa16.29■□□□□ 0.2
RNF4-212ENST00000509258 LAMC1P11047 1609 aa16.28■□□□□ 0.2
RNF4-212ENST00000509258 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
RNF4-212ENST00000509258 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
RNF4-212ENST00000509258 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
RNF4-212ENST00000509258 C8orf37Q96NL8 207 aa16.26■□□□□ 0.19
RNF4-212ENST00000509258 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
RNF4-212ENST00000509258 SOS2Q07890 1332 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms