RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 STAC3Q96MF2 364 aa21.16■□□□□ 0.98
SNCAIP-211ENST00000509023 KDM4FA0A1W2PPD8 638 aa21.16■□□□□ 0.98
SNCAIP-211ENST00000509023 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
SNCAIP-211ENST00000509023 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
SNCAIP-211ENST00000509023 CEP170BQ9Y4F5 1589 aaPredicted RBP21.11■□□□□ 0.97
SNCAIP-211ENST00000509023 NRXN1Q9ULB1 1477 aa21.1■□□□□ 0.97
SNCAIP-211ENST00000509023 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
SNCAIP-211ENST00000509023 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
SNCAIP-211ENST00000509023 TRPM1Q7Z4N2 1603 aa21.1■□□□□ 0.97
SNCAIP-211ENST00000509023 RIMS2Q9UQ26 1411 aa21.09■□□□□ 0.97
SNCAIP-211ENST00000509023 VGFO15240 615 aaPredicted RBP21.09■□□□□ 0.97
SNCAIP-211ENST00000509023 ZNF142P52746 1687 aaPredicted RBP21.09■□□□□ 0.97
SNCAIP-211ENST00000509023 ZFYVE9O95405 1425 aa21.08■□□□□ 0.96
SNCAIP-211ENST00000509023 TMEM2Q9UHN6 1383 aa21.07■□□□□ 0.96
SNCAIP-211ENST00000509023 PIK3C2GO75747 1445 aa21.07■□□□□ 0.96
SNCAIP-211ENST00000509023 ROCK2O75116 1388 aaKnown RBP21.05■□□□□ 0.96
SNCAIP-211ENST00000509023 THEMISQ8N1K5 641 aaPredicted RBP21.05■□□□□ 0.96
SNCAIP-211ENST00000509023 SLIT1O75093 1534 aa21.03■□□□□ 0.96
SNCAIP-211ENST00000509023 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNCAIP-211ENST00000509023 KIAA1210Q9ULL0 1709 aa21.03■□□□□ 0.96
SNCAIP-211ENST00000509023 NBPF1Q3BBV0 1214 aa21.03■□□□□ 0.96
SNCAIP-211ENST00000509023 ARHGAP23Q9P227 1491 aa21.02■□□□□ 0.96
SNCAIP-211ENST00000509023 HDGFP51858 240 aaKnown RBP21.02■□□□□ 0.96
SNCAIP-211ENST00000509023 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
SNCAIP-211ENST00000509023 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
SNCAIP-211ENST00000509023 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
SNCAIP-211ENST00000509023 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
SNCAIP-211ENST00000509023 C14orf93Q9H972 538 aaKnown RBP20.98■□□□□ 0.95
SNCAIP-211ENST00000509023 LAMC1P11047 1609 aa20.98■□□□□ 0.95
SNCAIP-211ENST00000509023 LTKP29376 864 aa20.97■□□□□ 0.95
SNCAIP-211ENST00000509023 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
SNCAIP-211ENST00000509023 EID1Q9Y6B2 187 aa20.97■□□□□ 0.95
SNCAIP-211ENST00000509023 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNCAIP-211ENST00000509023 SETBP1Q9Y6X0 1596 aa20.95■□□□□ 0.94
SNCAIP-211ENST00000509023 USP47Q96K76 1375 aa20.95■□□□□ 0.94
SNCAIP-211ENST00000509023 SCAF11Q99590 1463 aaKnown RBP20.94■□□□□ 0.94
SNCAIP-211ENST00000509023 NRXN3Q9Y4C0 1643 aa20.94■□□□□ 0.94
SNCAIP-211ENST00000509023 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
SNCAIP-211ENST00000509023 HIRIP3Q9BW71 556 aaPredicted RBP20.94■□□□□ 0.94
SNCAIP-211ENST00000509023 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
SNCAIP-211ENST00000509023 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
SNCAIP-211ENST00000509023 PLEKHG1Q9ULL1 1385 aa20.93■□□□□ 0.94
SNCAIP-211ENST00000509023 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
SNCAIP-211ENST00000509023 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
SNCAIP-211ENST00000509023 BCANQ96GW7 911 aa20.91■□□□□ 0.94
SNCAIP-211ENST00000509023 TMEM132EQ6IEE7 984 aa20.9■□□□□ 0.94
SNCAIP-211ENST00000509023 ANKLE2Q86XL3 938 aa20.9■□□□□ 0.94
SNCAIP-211ENST00000509023 SETD1AO15047 1707 aaKnown RBP20.89■□□□□ 0.94
SNCAIP-211ENST00000509023 ASXL1Q8IXJ9 1541 aa20.89■□□□□ 0.94
SNCAIP-211ENST00000509023 LMTK3Q96Q04 1460 aa20.87■□□□□ 0.93
SNCAIP-211ENST00000509023 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
SNCAIP-211ENST00000509023 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
SNCAIP-211ENST00000509023 ST20-MTHFSA0A0A6YYL1 179 aa20.85■□□□□ 0.93
SNCAIP-211ENST00000509023 METP08581 1390 aa20.83■□□□□ 0.93
SNCAIP-211ENST00000509023 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.93
SNCAIP-211ENST00000509023 MED14O60244 1454 aa20.83■□□□□ 0.93
SNCAIP-211ENST00000509023 HSPA2P54652 639 aa20.83■□□□□ 0.92
SNCAIP-211ENST00000509023 SLC26A8Q96RN1 970 aa20.83■□□□□ 0.92
SNCAIP-211ENST00000509023 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.92
SNCAIP-211ENST00000509023 YTHDC2Q9H6S0 1430 aaKnown RBP20.82■□□□□ 0.92
SNCAIP-211ENST00000509023 DIP2AQ14689 1571 aa20.82■□□□□ 0.92
SNCAIP-211ENST00000509023 NCKAP5LQ9HCH0 1330 aa20.81■□□□□ 0.92
SNCAIP-211ENST00000509023 STK26Q9P289 416 aa20.8■□□□□ 0.92
SNCAIP-211ENST00000509023 NPHP4O75161 1426 aaPredicted RBP20.8■□□□□ 0.92
SNCAIP-211ENST00000509023 TBX22Q9Y458 520 aa20.79■□□□□ 0.92
SNCAIP-211ENST00000509023 ARHGEF28Q8N1W1 1705 aaKnown RBP20.79■□□□□ 0.92
SNCAIP-211ENST00000509023 LRPPRCP42704 1394 aaKnown RBP20.78■□□□□ 0.92
SNCAIP-211ENST00000509023 TESK2Q96S53 571 aa20.76■□□□□ 0.91
SNCAIP-211ENST00000509023 ABCC11Q96J66 1382 aa20.74■□□□□ 0.91
SNCAIP-211ENST00000509023 CENPJQ9HC77 1338 aaPredicted RBP20.74■□□□□ 0.91
SNCAIP-211ENST00000509023 KNDC1Q76NI1 1749 aa20.74■□□□□ 0.91
SNCAIP-211ENST00000509023 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
SNCAIP-211ENST00000509023 C11orf95C9JLR9 678 aaPredicted RBP20.74■□□□□ 0.91
SNCAIP-211ENST00000509023 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
SNCAIP-211ENST00000509023 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
SNCAIP-211ENST00000509023 TECPR2O15040 1411 aa20.72■□□□□ 0.91
SNCAIP-211ENST00000509023 PIK3R4Q99570 1358 aa20.71■□□□□ 0.91
SNCAIP-211ENST00000509023 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
SNCAIP-211ENST00000509023 CPS1P31327 1500 aa20.71■□□□□ 0.91
SNCAIP-211ENST00000509023 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
SNCAIP-211ENST00000509023 PRAM1Q96QH2 718 aa20.7■□□□□ 0.9
SNCAIP-211ENST00000509023 SBNO2Q9Y2G9 1366 aa20.69■□□□□ 0.9
SNCAIP-211ENST00000509023 KIF7Q2M1P5 1343 aa20.69■□□□□ 0.9
SNCAIP-211ENST00000509023 POGKQ9P215 609 aa20.69■□□□□ 0.9
SNCAIP-211ENST00000509023 AMOTL2Q9Y2J4 779 aa20.69■□□□□ 0.9
SNCAIP-211ENST00000509023 CCDC7Q96M83 1385 aa20.69■□□□□ 0.9
SNCAIP-211ENST00000509023 TMF1P82094 1093 aa20.68■□□□□ 0.9
SNCAIP-211ENST00000509023 SAFB2Q14151 953 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNCAIP-211ENST00000509023 DISP3Q9P2K9 1392 aa20.68■□□□□ 0.9
SNCAIP-211ENST00000509023 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
SNCAIP-211ENST00000509023 FAM135BQ49AJ0 1406 aa20.67■□□□□ 0.9
SNCAIP-211ENST00000509023 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
SNCAIP-211ENST00000509023 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
SNCAIP-211ENST00000509023 PLEKHH1Q9ULM0 1364 aa20.66■□□□□ 0.9
SNCAIP-211ENST00000509023 CHD2O14647 1828 aaKnown RBP20.66■□□□□ 0.9
SNCAIP-211ENST00000509023 SIRT1Q96EB6 747 aa20.66■□□□□ 0.9
SNCAIP-211ENST00000509023 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
SNCAIP-211ENST00000509023 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
SNCAIP-211ENST00000509023 PTCH1Q13635 1447 aa20.64■□□□□ 0.9
SNCAIP-211ENST00000509023 KCNA6P17658 529 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms