RNA–Protein interactions for RNA: ENST00000508900.1

FRAS1-203, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best)

Gene FRAS1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-203ENST00000508900 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
FRAS1-203ENST00000508900 SAMD9LQ8IVG5 1584 aa16.47■□□□□ 0.23
FRAS1-203ENST00000508900 IGHDP01880 384 aa16.46■□□□□ 0.23
FRAS1-203ENST00000508900 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
FRAS1-203ENST00000508900 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
FRAS1-203ENST00000508900 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
FRAS1-203ENST00000508900 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
FRAS1-203ENST00000508900 ATP10AO60312 1499 aa16.44■□□□□ 0.22
FRAS1-203ENST00000508900 SEC24BO95487 1268 aa16.44■□□□□ 0.22
FRAS1-203ENST00000508900 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
FRAS1-203ENST00000508900 POGKQ9P215 609 aa16.44■□□□□ 0.22
FRAS1-203ENST00000508900 IQGAP3Q86VI3 1631 aa16.44■□□□□ 0.22
FRAS1-203ENST00000508900 BCAR3O75815 825 aa16.44■□□□□ 0.22
FRAS1-203ENST00000508900 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
FRAS1-203ENST00000508900 NLRP1Q9C000 1473 aa16.43■□□□□ 0.22
FRAS1-203ENST00000508900 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
FRAS1-203ENST00000508900 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
FRAS1-203ENST00000508900 ABCC2Q92887 1545 aa16.42■□□□□ 0.22
FRAS1-203ENST00000508900 IQGAP1P46940 1657 aa16.42■□□□□ 0.22
FRAS1-203ENST00000508900 SYNMO15061 1565 aa16.41■□□□□ 0.22
FRAS1-203ENST00000508900 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
FRAS1-203ENST00000508900 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
FRAS1-203ENST00000508900 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
FRAS1-203ENST00000508900 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
FRAS1-203ENST00000508900 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
FRAS1-203ENST00000508900 CCDC146Q8IYE0 955 aa16.4■□□□□ 0.22
FRAS1-203ENST00000508900 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
FRAS1-203ENST00000508900 APAF1O14727 1248 aa16.38■□□□□ 0.21
FRAS1-203ENST00000508900 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
FRAS1-203ENST00000508900 MYOM1P52179 1685 aa16.38■□□□□ 0.21
FRAS1-203ENST00000508900 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
FRAS1-203ENST00000508900 RRAGDQ9NQL2 400 aaPredicted RBP16.38■□□□□ 0.21
FRAS1-203ENST00000508900 E9PSI1 815 aa16.37■□□□□ 0.21
FRAS1-203ENST00000508900 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
FRAS1-203ENST00000508900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.213e-7■■□□□ 11.5
FRAS1-203ENST00000508900 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
FRAS1-203ENST00000508900 MAPK8IP3Q9UPT6 1336 aa16.37■□□□□ 0.21
FRAS1-203ENST00000508900 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
FRAS1-203ENST00000508900 BECN1Q14457 450 aa16.36■□□□□ 0.21
FRAS1-203ENST00000508900 SYCP2Q9BX26 1530 aa16.35■□□□□ 0.21
FRAS1-203ENST00000508900 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
FRAS1-203ENST00000508900 PLXNC1O60486 1568 aa16.35■□□□□ 0.21
FRAS1-203ENST00000508900 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
FRAS1-203ENST00000508900 NINLQ9Y2I6 1382 aa16.33■□□□□ 0.2
FRAS1-203ENST00000508900 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.2
FRAS1-203ENST00000508900 CDCA8Q53HL2 280 aa16.32■□□□□ 0.2
FRAS1-203ENST00000508900 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
FRAS1-203ENST00000508900 COG6Q9Y2V7 657 aa16.31■□□□□ 0.2
FRAS1-203ENST00000508900 SCAPERQ9BY12 1400 aa16.31■□□□□ 0.2
FRAS1-203ENST00000508900 SCAF11Q99590 1463 aaKnown RBP16.31■□□□□ 0.2
FRAS1-203ENST00000508900 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
FRAS1-203ENST00000508900 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
FRAS1-203ENST00000508900 ZMYM3Q14202 1370 aa16.3■□□□□ 0.2
FRAS1-203ENST00000508900 TBC1D2Q9BYX2 928 aa16.3■□□□□ 0.2
FRAS1-203ENST00000508900 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
FRAS1-203ENST00000508900 CENPJQ9HC77 1338 aaPredicted RBP16.29■□□□□ 0.2
FRAS1-203ENST00000508900 SPHKAPQ2M3C7 1700 aa16.29■□□□□ 0.2
FRAS1-203ENST00000508900 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
FRAS1-203ENST00000508900 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
FRAS1-203ENST00000508900 FBLN2P98095 1184 aa16.27■□□□□ 0.2
FRAS1-203ENST00000508900 TTC37Q6PGP7 1564 aa16.27■□□□□ 0.19
FRAS1-203ENST00000508900 WWC1Q8IX03 1113 aa16.27■□□□□ 0.19
FRAS1-203ENST00000508900 PCDHB15Q9Y5E8 787 aa16.27■□□□□ 0.19
FRAS1-203ENST00000508900 CEP152O94986 1710 aa16.26■□□□□ 0.19
FRAS1-203ENST00000508900 KDM5AP29375 1690 aaKnown RBP16.26■□□□□ 0.19
FRAS1-203ENST00000508900 ARHGAP5Q13017 1502 aa16.25■□□□□ 0.19
FRAS1-203ENST00000508900 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
FRAS1-203ENST00000508900 AAMPQ13685 434 aa16.24■□□□□ 0.19
FRAS1-203ENST00000508900 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
FRAS1-203ENST00000508900 RARSP54136 660 aaKnown RBP16.24■□□□□ 0.19
FRAS1-203ENST00000508900 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
FRAS1-203ENST00000508900 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
FRAS1-203ENST00000508900 RLBP1P12271 317 aa16.23■□□□□ 0.19
FRAS1-203ENST00000508900 ERCC6Q03468 1493 aa16.23■□□□□ 0.19
FRAS1-203ENST00000508900 MCM4P33991 863 aa16.23■□□□□ 0.19
FRAS1-203ENST00000508900 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
FRAS1-203ENST00000508900 POLR3AO14802 1390 aaPredicted RBP16.23■□□□□ 0.19
FRAS1-203ENST00000508900 TRPM2O94759 1503 aa16.22■□□□□ 0.19
FRAS1-203ENST00000508900 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
FRAS1-203ENST00000508900 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
FRAS1-203ENST00000508900 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
FRAS1-203ENST00000508900 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
FRAS1-203ENST00000508900 UPF2Q9HAU5 1272 aaKnown RBP16.21■□□□□ 0.19
FRAS1-203ENST00000508900 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
FRAS1-203ENST00000508900 ERVK-7P63135 1459 aa16.21■□□□□ 0.19
FRAS1-203ENST00000508900 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
FRAS1-203ENST00000508900 KIAA1210Q9ULL0 1709 aa16.2■□□□□ 0.18
FRAS1-203ENST00000508900 CLCN1P35523 988 aa16.2■□□□□ 0.18
FRAS1-203ENST00000508900 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
FRAS1-203ENST00000508900 PTPRTO14522 1441 aa16.2■□□□□ 0.18
FRAS1-203ENST00000508900 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
FRAS1-203ENST00000508900 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
FRAS1-203ENST00000508900 RWDD1Q9H446 243 aaPredicted RBP16.16■□□□□ 0.18
FRAS1-203ENST00000508900 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
FRAS1-203ENST00000508900 TRAK2O60296 914 aa16.16■□□□□ 0.18
FRAS1-203ENST00000508900 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
FRAS1-203ENST00000508900 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
FRAS1-203ENST00000508900 GZF1Q9H116 711 aaPredicted RBP16.15■□□□□ 0.18
FRAS1-203ENST00000508900 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
FRAS1-203ENST00000508900 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms