RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
SIL1-210ENST00000508639 E9PCH4 1651 aa16.31■□□□□ 0.2
SIL1-210ENST00000508639 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
SIL1-210ENST00000508639 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
SIL1-210ENST00000508639 CHD2O14647 1828 aaKnown RBP16.3■□□□□ 0.2
SIL1-210ENST00000508639 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
SIL1-210ENST00000508639 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
SIL1-210ENST00000508639 PROSER2Q86WR7 435 aaPredicted RBP16.29■□□□□ 0.2
SIL1-210ENST00000508639 RIMS2Q9UQ26 1411 aa16.28■□□□□ 0.2
SIL1-210ENST00000508639 ROCK1Q13464 1354 aa16.27■□□□□ 0.2
SIL1-210ENST00000508639 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
SIL1-210ENST00000508639 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
SIL1-210ENST00000508639 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
SIL1-210ENST00000508639 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
SIL1-210ENST00000508639 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
SIL1-210ENST00000508639 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
SIL1-210ENST00000508639 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
SIL1-210ENST00000508639 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
SIL1-210ENST00000508639 ITGAEP38570 1179 aa16.21■□□□□ 0.19
SIL1-210ENST00000508639 NUP155O75694 1391 aa16.21■□□□□ 0.19
SIL1-210ENST00000508639 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
SIL1-210ENST00000508639 SLAIN2Q9P270 581 aa16.2■□□□□ 0.18
SIL1-210ENST00000508639 CHGAP10645 457 aaKnown RBP16.19■□□□□ 0.18
SIL1-210ENST00000508639 BCANQ96GW7 911 aa16.18■□□□□ 0.18
SIL1-210ENST00000508639 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
SIL1-210ENST00000508639 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
SIL1-210ENST00000508639 PPP1R15AO75807 674 aaPredicted RBP16.15■□□□□ 0.18
SIL1-210ENST00000508639 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.15■□□□□ 0.18
SIL1-210ENST00000508639 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.15■□□□□ 0.18
SIL1-210ENST00000508639 MSH6P52701 1360 aa16.14■□□□□ 0.17
SIL1-210ENST00000508639 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
SIL1-210ENST00000508639 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
SIL1-210ENST00000508639 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
SIL1-210ENST00000508639 PHLPP1O60346 1717 aa16.13■□□□□ 0.17
SIL1-210ENST00000508639 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
SIL1-210ENST00000508639 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
SIL1-210ENST00000508639 PIK3R4Q99570 1358 aa16.12■□□□□ 0.17
SIL1-210ENST00000508639 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
SIL1-210ENST00000508639 DIP2AQ14689 1571 aa16.11■□□□□ 0.17
SIL1-210ENST00000508639 METP08581 1390 aa16.11■□□□□ 0.17
SIL1-210ENST00000508639 NAIPQ13075 1403 aa16.11■□□□□ 0.17
SIL1-210ENST00000508639 CLTCL1P53675 1640 aa16.1■□□□□ 0.17
SIL1-210ENST00000508639 C19orf44Q9H6X5 657 aa16.1■□□□□ 0.17
SIL1-210ENST00000508639 XRN1Q8IZH2 1706 aaKnown RBP16.09■□□□□ 0.17
SIL1-210ENST00000508639 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
SIL1-210ENST00000508639 LRP6O75581 1613 aa16.08■□□□□ 0.17
SIL1-210ENST00000508639 TRPM2O94759 1503 aa16.07■□□□□ 0.16
SIL1-210ENST00000508639 NEXMIFQ5QGS0 1516 aa16.07■□□□□ 0.16
SIL1-210ENST00000508639 JCADQ9P266 1359 aa16.06■□□□□ 0.16
SIL1-210ENST00000508639 BRINP3Q76B58 766 aa16.06■□□□□ 0.16
SIL1-210ENST00000508639 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
SIL1-210ENST00000508639 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
SIL1-210ENST00000508639 MST1RQ04912 1400 aa16.02■□□□□ 0.16
SIL1-210ENST00000508639 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.16
SIL1-210ENST00000508639 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
SIL1-210ENST00000508639 ATF3P18847 181 aa16.01■□□□□ 0.15
SIL1-210ENST00000508639 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
SIL1-210ENST00000508639 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
SIL1-210ENST00000508639 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
SIL1-210ENST00000508639 KIF1BO60333 1816 aa15.98■□□□□ 0.15
SIL1-210ENST00000508639 HFM1A2PYH4 1435 aa15.98■□□□□ 0.15
SIL1-210ENST00000508639 DCCP43146 1447 aa15.98■□□□□ 0.15
SIL1-210ENST00000508639 NALCNQ8IZF0 1738 aa15.98■□□□□ 0.15
SIL1-210ENST00000508639 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
SIL1-210ENST00000508639 FOXD1Q16676 465 aa15.97■□□□□ 0.15
SIL1-210ENST00000508639 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
SIL1-210ENST00000508639 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
SIL1-210ENST00000508639 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
SIL1-210ENST00000508639 ROBO2Q9HCK4 1378 aa15.96■□□□□ 0.15
SIL1-210ENST00000508639 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
SIL1-210ENST00000508639 PPLO60437 1756 aa15.93■□□□□ 0.14
SIL1-210ENST00000508639 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
SIL1-210ENST00000508639 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
SIL1-210ENST00000508639 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
SIL1-210ENST00000508639 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
SIL1-210ENST00000508639 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
SIL1-210ENST00000508639 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
SIL1-210ENST00000508639 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
SIL1-210ENST00000508639 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
SIL1-210ENST00000508639 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
SIL1-210ENST00000508639 PRAG1Q86YV5 1406 aa15.9■□□□□ 0.14
SIL1-210ENST00000508639 ADGRF5Q8IZF2 1346 aa15.9■□□□□ 0.14
SIL1-210ENST00000508639 LAMC1P11047 1609 aa15.9■□□□□ 0.14
SIL1-210ENST00000508639 RPGRIP1LQ68CZ1 1315 aa15.89■□□□□ 0.13
SIL1-210ENST00000508639 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
SIL1-210ENST00000508639 SPATA31E1Q6ZUB1 1445 aa15.88■□□□□ 0.13
SIL1-210ENST00000508639 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
SIL1-210ENST00000508639 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
SIL1-210ENST00000508639 LRRC59Q96AG4 307 aaKnown RBP15.87■□□□□ 0.13
SIL1-210ENST00000508639 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
SIL1-210ENST00000508639 AFF2P51816 1311 aa15.86■□□□□ 0.13
SIL1-210ENST00000508639 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
SIL1-210ENST00000508639 MPHOSPH9Q99550 1183 aa15.84■□□□□ 0.13
SIL1-210ENST00000508639 IFT172Q9UG01 1749 aa15.84■□□□□ 0.13
SIL1-210ENST00000508639 RGL3Q3MIN7 710 aa15.83■□□□□ 0.12
SIL1-210ENST00000508639 WAPLQ7Z5K2 1190 aa15.83■□□□□ 0.12
SIL1-210ENST00000508639 RXRBP28702 533 aa15.82■□□□□ 0.12
SIL1-210ENST00000508639 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
SIL1-210ENST00000508639 PLEKHH1Q9ULM0 1364 aa15.82■□□□□ 0.12
SIL1-210ENST00000508639 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms