RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
SMARCA5-202ENST00000508573 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
SMARCA5-202ENST00000508573 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
SMARCA5-202ENST00000508573 SEMA3EO15041 775 aa8.87□□□□□ -0.99
SMARCA5-202ENST00000508573 BLOC1S3Q6QNY0 202 aa8.86□□□□□ -0.99
SMARCA5-202ENST00000508573 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
SMARCA5-202ENST00000508573 TMEM134Q9H6X4 195 aa8.85□□□□□ -0.99
SMARCA5-202ENST00000508573 NRG2O14511 850 aaPredicted RBP8.84□□□□□ -0.99
SMARCA5-202ENST00000508573 FCHSD2O94868 740 aa8.84□□□□□ -0.99
SMARCA5-202ENST00000508573 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
SMARCA5-202ENST00000508573 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
SMARCA5-202ENST00000508573 PDZRN3Q9UPQ7 1066 aa8.83□□□□□ -1
SMARCA5-202ENST00000508573 LCE2BO14633 110 aa8.82□□□□□ -1
SMARCA5-202ENST00000508573 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
SMARCA5-202ENST00000508573 RNF223E7ERA6 249 aa8.8□□□□□ -1
SMARCA5-202ENST00000508573 OATP04181 439 aa8.8□□□□□ -1
SMARCA5-202ENST00000508573 CFHP08603 1231 aa8.8□□□□□ -1
SMARCA5-202ENST00000508573 SLC10A3P09131 477 aa8.8□□□□□ -1
SMARCA5-202ENST00000508573 SLC19A1P41440 591 aa8.8□□□□□ -1
SMARCA5-202ENST00000508573 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
SMARCA5-202ENST00000508573 TLL1O43897 1013 aa8.79□□□□□ -1
SMARCA5-202ENST00000508573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.78□□□□□ -1
SMARCA5-202ENST00000508573 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
SMARCA5-202ENST00000508573 PXYLP1Q8TE99 480 aa8.77□□□□□ -1.01
SMARCA5-202ENST00000508573 S1PR4O95977 384 aa8.76□□□□□ -1.01
SMARCA5-202ENST00000508573 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
SMARCA5-202ENST00000508573 NR1I2O75469 434 aa8.75□□□□□ -1.01
SMARCA5-202ENST00000508573 HIC1Q14526 733 aa8.75□□□□□ -1.01
SMARCA5-202ENST00000508573 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
SMARCA5-202ENST00000508573 SPRYD7Q5W111 196 aa8.74□□□□□ -1.01
SMARCA5-202ENST00000508573 SCUBE3Q8IX30 993 aa8.74□□□□□ -1.01
SMARCA5-202ENST00000508573 EMID1Q96A84 441 aaPredicted RBP8.74□□□□□ -1.01
SMARCA5-202ENST00000508573 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
SMARCA5-202ENST00000508573 FECHP22830 423 aa8.73□□□□□ -1.01
SMARCA5-202ENST00000508573 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
SMARCA5-202ENST00000508573 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
SMARCA5-202ENST00000508573 ANKLE1Q8NAG6 615 aa8.73□□□□□ -1.01
SMARCA5-202ENST00000508573 LIAT1Q6ZQX7 453 aa8.72□□□□□ -1.01
SMARCA5-202ENST00000508573 METTL3Q86U44 580 aaKnown RBP8.72□□□□□ -1.01
SMARCA5-202ENST00000508573 ZNF598Q86UK7 904 aaKnown RBP8.72□□□□□ -1.01
SMARCA5-202ENST00000508573 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
SMARCA5-202ENST00000508573 GNPATO15228 680 aa8.71□□□□□ -1.02
SMARCA5-202ENST00000508573 ADH1BP00325 375 aa8.71□□□□□ -1.02
SMARCA5-202ENST00000508573 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
SMARCA5-202ENST00000508573 TRIM67Q6ZTA4 783 aa8.71□□□□□ -1.02
SMARCA5-202ENST00000508573 RDH13Q8NBN7 331 aa8.7□□□□□ -1.02
SMARCA5-202ENST00000508573 ZNF697Q5TEC3 545 aa8.69□□□□□ -1.02
SMARCA5-202ENST00000508573 SPSB2Q99619 263 aa8.69□□□□□ -1.02
SMARCA5-202ENST00000508573 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
SMARCA5-202ENST00000508573 DDX11L8A8MPP1 907 aa8.68□□□□□ -1.02
SMARCA5-202ENST00000508573 PKDCCQ504Y2 493 aa8.68□□□□□ -1.02
SMARCA5-202ENST00000508573 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
SMARCA5-202ENST00000508573 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
SMARCA5-202ENST00000508573 PLA2G2CQ5R387 149 aa8.65□□□□□ -1.02
SMARCA5-202ENST00000508573 DGAT1O75907 488 aa8.64□□□□□ -1.03
SMARCA5-202ENST00000508573 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
SMARCA5-202ENST00000508573 MYT1Q01538 1121 aa8.64□□□□□ -1.03
SMARCA5-202ENST00000508573 GPR37O15354 613 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 GDF9O60383 454 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 PRR20EP86478 221 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 PRR20CP86479 221 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 PRR20DP86480 221 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 PRR20BP86481 221 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 PRR20AP86496 221 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 FUT2Q10981 343 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 MORN1Q5T089 497 aa8.63□□□□□ -1.03
SMARCA5-202ENST00000508573 FAM187AA6NFU0 413 aa8.62□□□□□ -1.03
SMARCA5-202ENST00000508573 GCGRP47871 477 aa8.62□□□□□ -1.03
SMARCA5-202ENST00000508573 FOXC1Q12948 553 aa8.62□□□□□ -1.03
SMARCA5-202ENST00000508573 PHOX2BQ99453 314 aa8.61□□□□□ -1.03
SMARCA5-202ENST00000508573 SLC27A5Q9Y2P5 690 aa8.61□□□□□ -1.03
SMARCA5-202ENST00000508573 FMNL1O95466 1100 aaPredicted RBP8.6□□□□□ -1.03
SMARCA5-202ENST00000508573 GPIHBP1Q8IV16 184 aa8.6□□□□□ -1.03
SMARCA5-202ENST00000508573 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
SMARCA5-202ENST00000508573 ZNF775Q96BV0 537 aaPredicted RBP8.6□□□□□ -1.03
SMARCA5-202ENST00000508573 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
SMARCA5-202ENST00000508573 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
SMARCA5-202ENST00000508573 POTECB2RU33 542 aa8.58□□□□□ -1.04
SMARCA5-202ENST00000508573 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
SMARCA5-202ENST00000508573 FCF1Q9Y324 198 aaKnown RBP8.58□□□□□ -1.04
SMARCA5-202ENST00000508573 RPIAP49247 311 aa8.57□□□□□ -1.04
SMARCA5-202ENST00000508573 PKD2L1Q9P0L9 805 aa8.57□□□□□ -1.04
SMARCA5-202ENST00000508573 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
SMARCA5-202ENST00000508573 BRICD5Q6PL45 260 aa8.56□□□□□ -1.04
SMARCA5-202ENST00000508573 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
SMARCA5-202ENST00000508573 ZBTB24O43167 697 aaPredicted RBP8.54□□□□□ -1.04
SMARCA5-202ENST00000508573 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
SMARCA5-202ENST00000508573 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
SMARCA5-202ENST00000508573 RNF19BQ6ZMZ0 732 aa8.53□□□□□ -1.04
SMARCA5-202ENST00000508573 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
SMARCA5-202ENST00000508573 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
SMARCA5-202ENST00000508573 LMOD2Q6P5Q4 547 aa8.52□□□□□ -1.05
SMARCA5-202ENST00000508573 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
SMARCA5-202ENST00000508573 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
SMARCA5-202ENST00000508573 IRF6O14896 467 aa8.49□□□□□ -1.05
SMARCA5-202ENST00000508573 CD46P15529 392 aa8.49□□□□□ -1.05
SMARCA5-202ENST00000508573 Q3C1V9 767 aa8.49□□□□□ -1.05
SMARCA5-202ENST00000508573 MSS51Q4VC12 460 aa8.49□□□□□ -1.05
SMARCA5-202ENST00000508573 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms