RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 KIF7Q2M1P5 1343 aa8.89□□□□□ -0.99
UBE2D3-224ENST00000508474 TPD52L1Q16890 204 aaPredicted RBP8.89□□□□□ -0.99
UBE2D3-224ENST00000508474 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-224ENST00000508474 CDC45O75419 566 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 MCM2P49736 904 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 UACAQ9BZF9 1416 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 C11orf95C9JLR9 678 aaPredicted RBP8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 CDR1P51861 262 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 FAM184AQ8NB25 1140 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 RAPGEF2Q9Y4G8 1499 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 MROH2BQ7Z745 1585 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 RUFY2Q8WXA3 655 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 SPAG9O60271 1321 aaKnown RBP8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 RABEP1Q15276 862 aa8.88□□□□□ -0.99
UBE2D3-224ENST00000508474 USP8P40818 1118 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 WASHC2AQ641Q2 1341 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 PDE3AQ14432 1141 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 RNF20Q5VTR2 975 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 NAT10Q9H0A0 1025 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 TOP2AP11388 1531 aaKnown RBP8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 AKNAQ7Z591 1439 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 MIA2Q96PC5 1412 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 CCDC112Q8NEF3 446 aa8.87□□□□□ -0.99
UBE2D3-224ENST00000508474 RNF214Q8ND24 703 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 BICD2Q8TD16 824 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 RUFY1Q96T51 708 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 SMC3Q9UQE7 1217 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 APAF1O14727 1248 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 H0YHG0 523 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 IPO7O95373 1038 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 ZKSCAN1P17029 563 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 MCM5P33992 734 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 CLCN1P35523 988 aa8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-224ENST00000508474 CALCOCO1Q9P1Z2 691 aa8.85□□□□□ -0.99
UBE2D3-224ENST00000508474 HOOK1Q9UJC3 728 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-224ENST00000508474 FOXD4L6Q3SYB3 417 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-224ENST00000508474 FOXD4L3Q6VB84 417 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-224ENST00000508474 RILPL2Q969X0 211 aa8.85□□□□□ -0.99
UBE2D3-224ENST00000508474 TERF2IPQ9NYB0 399 aa8.85□□□□□ -0.99
UBE2D3-224ENST00000508474 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 BCL2L13Q9BXK5 485 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 DEF6Q9H4E7 631 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 WASHC2CQ9Y4E1 1318 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 DYNC1I1O14576 645 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 CCDC73Q6ZRK6 1079 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 ANKRD20A12PQ8NF67 263 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 DCTN1Q14203 1278 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 TRIM5Q9C035 493 aa8.84□□□□□ -0.99
UBE2D3-224ENST00000508474 RRBP1Q9P2E9 1410 aaKnown RBP8.84□□□□□ -1
UBE2D3-224ENST00000508474 K7ELQ4 463 aaPredicted RBP8.83□□□□□ -1
UBE2D3-224ENST00000508474 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
UBE2D3-224ENST00000508474 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
UBE2D3-224ENST00000508474 CCDC191Q8NCU4 936 aa8.83□□□□□ -1
UBE2D3-224ENST00000508474 RUNDC1Q96C34 613 aa8.83□□□□□ -1
UBE2D3-224ENST00000508474 PDZRN3Q9UPQ7 1066 aa8.83□□□□□ -1
UBE2D3-224ENST00000508474 RRP7AQ9Y3A4 280 aaKnown RBP8.83□□□□□ -1
UBE2D3-224ENST00000508474 SLC4A10Q6U841 1118 aa8.82□□□□□ -1
UBE2D3-224ENST00000508474 CCDC144AA2RUR9 1427 aa8.82□□□□□ -1
UBE2D3-224ENST00000508474 PDE4CQ08493 712 aa8.82□□□□□ -1
UBE2D3-224ENST00000508474 EIF3JO75822 258 aaKnown RBP8.82□□□□□ -1
UBE2D3-224ENST00000508474 LNPKQ9C0E8 428 aa8.82□□□□□ -1
UBE2D3-224ENST00000508474 CCDC192P0DO97 292 aa8.81□□□□□ -1
UBE2D3-224ENST00000508474 VPS37CA5D8V6 355 aaPredicted RBP8.81□□□□□ -1
UBE2D3-224ENST00000508474 KIF2AO00139 706 aaPredicted RBP8.81□□□□□ -1
UBE2D3-224ENST00000508474 ANO2Q9NQ90 1003 aa8.81□□□□□ -1
UBE2D3-224ENST00000508474 TULP1O00294 542 aaPredicted RBP8.81□□□□□ -1
UBE2D3-224ENST00000508474 PANK1Q8TE04 598 aa8.81□□□□□ -1
UBE2D3-224ENST00000508474 CGNQ9P2M7 1197 aaKnown RBP8.8□□□□□ -1
UBE2D3-224ENST00000508474 ERLIN1O75477 346 aa8.8□□□□□ -1
UBE2D3-224ENST00000508474 CREBRFQ8IUR6 639 aa8.8□□□□□ -1
UBE2D3-224ENST00000508474 CPLX2Q6PUV4 134 aaKnown RBP8.8□□□□□ -1
UBE2D3-224ENST00000508474 RASSF8Q8NHQ8 419 aa8.8□□□□□ -1
UBE2D3-224ENST00000508474 GCC1Q96CN9 775 aa8.8□□□□□ -1
UBE2D3-224ENST00000508474 CEP89Q96ST8 783 aa8.8□□□□□ -1
UBE2D3-224ENST00000508474 RRP12Q5JTH9 1297 aaKnown RBP8.79□□□□□ -1
UBE2D3-224ENST00000508474 PNISRQ8TF01 805 aaKnown RBP8.79□□□□□ -1
UBE2D3-224ENST00000508474 PRIMPOLQ96LW4 560 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 PDCP20941 246 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 KIF21BO75037 1637 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 CUX1P39880 1505 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
UBE2D3-224ENST00000508474 HDGFP51858 240 aaKnown RBP8.79□□□□□ -1
UBE2D3-224ENST00000508474 CBX1P83916 185 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 CHMP3Q9Y3E7 222 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 FHOD3Q2V2M9 1422 aa8.79□□□□□ -1
UBE2D3-224ENST00000508474 KIAA0754O94854 1291 aa8.78□□□□□ -1
UBE2D3-224ENST00000508474 PES1O00541 588 aaKnown RBP8.78□□□□□ -1
UBE2D3-224ENST00000508474 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
UBE2D3-224ENST00000508474 GTPBP4Q9BZE4 634 aaKnown RBP8.78□□□□□ -1
UBE2D3-224ENST00000508474 OLFM4Q6UX06 510 aa8.78□□□□□ -1
UBE2D3-224ENST00000508474 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
UBE2D3-224ENST00000508474 PRDM10Q9NQV6 1147 aa8.78□□□□□ -1
UBE2D3-224ENST00000508474 LRRFIP1Q32MZ4 808 aaKnown RBP8.78□□□□□ -1
UBE2D3-224ENST00000508474 FGD6Q6ZV73 1430 aa8.77□□□□□ -1
UBE2D3-224ENST00000508474 PATL2C9JE40 543 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 CT47B1P0C2W7 299 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms