RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
GYPA-205ENST00000508337 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
GYPA-205ENST00000508337 PDE4DQ08499 809 aa11.41□□□□□ -0.58
GYPA-205ENST00000508337 SULF1Q8IWU6 871 aa11.41□□□□□ -0.58
GYPA-205ENST00000508337 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
GYPA-205ENST00000508337 AMHR2Q16671 573 aa11.4□□□□□ -0.58
GYPA-205ENST00000508337 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
GYPA-205ENST00000508337 DDX11L8A8MPP1 907 aa11.38□□□□□ -0.59
GYPA-205ENST00000508337 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
GYPA-205ENST00000508337 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
GYPA-205ENST00000508337 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
GYPA-205ENST00000508337 BCAMP50895 628 aa11.36□□□□□ -0.59
GYPA-205ENST00000508337 HPS5Q9UPZ3 1129 aa11.36□□□□□ -0.59
GYPA-205ENST00000508337 GIGYF2Q6Y7W6 1299 aaKnown RBP11.35□□□□□ -0.59
GYPA-205ENST00000508337 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
GYPA-205ENST00000508337 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
GYPA-205ENST00000508337 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
GYPA-205ENST00000508337 PPP4CP60510 307 aa11.34□□□□□ -0.59
GYPA-205ENST00000508337 PTPN5P54829 565 aa11.32□□□□□ -0.6
GYPA-205ENST00000508337 THSD4Q6ZMP0 1018 aa11.32□□□□□ -0.6
GYPA-205ENST00000508337 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
GYPA-205ENST00000508337 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
GYPA-205ENST00000508337 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
GYPA-205ENST00000508337 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
GYPA-205ENST00000508337 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
GYPA-205ENST00000508337 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
GYPA-205ENST00000508337 FAM217BQ9NTX9 383 aaPredicted RBP11.29□□□□□ -0.6
GYPA-205ENST00000508337 CFHP08603 1231 aa11.28□□□□□ -0.6
GYPA-205ENST00000508337 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
GYPA-205ENST00000508337 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
GYPA-205ENST00000508337 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
GYPA-205ENST00000508337 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
GYPA-205ENST00000508337 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
GYPA-205ENST00000508337 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
GYPA-205ENST00000508337 REPIN1Q9BWE0 567 aaKnown RBP11.24□□□□□ -0.61
GYPA-205ENST00000508337 WBP1LQ9NX94 342 aa11.24□□□□□ -0.61
GYPA-205ENST00000508337 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
GYPA-205ENST00000508337 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
GYPA-205ENST00000508337 CD46P15529 392 aa11.22□□□□□ -0.61
GYPA-205ENST00000508337 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
GYPA-205ENST00000508337 MS4A1P11836 297 aa11.21□□□□□ -0.61
GYPA-205ENST00000508337 GRIPAP1Q4V328 841 aa11.21□□□□□ -0.61
GYPA-205ENST00000508337 SLC10A3P09131 477 aa11.2□□□□□ -0.62
GYPA-205ENST00000508337 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
GYPA-205ENST00000508337 KDM4AO75164 1064 aa11.18□□□□□ -0.62
GYPA-205ENST00000508337 GCGRP47871 477 aa11.18□□□□□ -0.62
GYPA-205ENST00000508337 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
GYPA-205ENST00000508337 PCDHB3Q9Y5E6 796 aa11.18□□□□□ -0.62
GYPA-205ENST00000508337 USP46P62068 366 aa11.17□□□□□ -0.62
GYPA-205ENST00000508337 APLP1P51693 650 aa11.16□□□□□ -0.62
GYPA-205ENST00000508337 IL27Q8NEV9 243 aa11.15□□□□□ -0.62
GYPA-205ENST00000508337 RSPH6AQ9H0K4 717 aa11.15□□□□□ -0.62
GYPA-205ENST00000508337 ACTN4O43707 911 aaKnown RBP11.14□□□□□ -0.63
GYPA-205ENST00000508337 FAM117AQ9C073 453 aa11.14□□□□□ -0.63
GYPA-205ENST00000508337 FUT2Q10981 343 aa11.13□□□□□ -0.63
GYPA-205ENST00000508337 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
GYPA-205ENST00000508337 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
GYPA-205ENST00000508337 COPS2P61201 443 aa11.12□□□□□ -0.63
GYPA-205ENST00000508337 NR1I2O75469 434 aa11.11□□□□□ -0.63
GYPA-205ENST00000508337 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
GYPA-205ENST00000508337 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
GYPA-205ENST00000508337 HOXA2O43364 376 aa11.09□□□□□ -0.63
GYPA-205ENST00000508337 BLOC1S3Q6QNY0 202 aa11.08□□□□□ -0.64
GYPA-205ENST00000508337 MTRQ99707 1265 aa11.07□□□□□ -0.64
GYPA-205ENST00000508337 IL21Q9HBE4 155 aa11.07□□□□□ -0.64
GYPA-205ENST00000508337 FDX1P10109 184 aa11.06□□□□□ -0.64
GYPA-205ENST00000508337 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
GYPA-205ENST00000508337 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
GYPA-205ENST00000508337 Q3C1V9 767 aa11.06□□□□□ -0.64
GYPA-205ENST00000508337 PCMTD1Q96MG8 357 aaPredicted RBP11.06□□□□□ -0.64
GYPA-205ENST00000508337 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
GYPA-205ENST00000508337 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
GYPA-205ENST00000508337 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
GYPA-205ENST00000508337 SH3D19Q5HYK7 790 aa11.04□□□□□ -0.64
GYPA-205ENST00000508337 RIC3Q7Z5B4 369 aa11.04□□□□□ -0.64
GYPA-205ENST00000508337 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
GYPA-205ENST00000508337 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
GYPA-205ENST00000508337 NDUFV2P19404 249 aa11.03□□□□□ -0.64
GYPA-205ENST00000508337 KCNC4Q03721 635 aa11.03□□□□□ -0.64
GYPA-205ENST00000508337 MORN1Q5T089 497 aa11.03□□□□□ -0.64
GYPA-205ENST00000508337 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
GYPA-205ENST00000508337 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.65
GYPA-205ENST00000508337 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
GYPA-205ENST00000508337 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
GYPA-205ENST00000508337 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
GYPA-205ENST00000508337 NUTM2DQ5VT03 806 aaPredicted RBP11.01□□□□□ -0.65
GYPA-205ENST00000508337 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
GYPA-205ENST00000508337 HLA-CQ95604 372 aa11.01□□□□□ -0.65
GYPA-205ENST00000508337 SLC27A5Q9Y2P5 690 aa11.01□□□□□ -0.65
GYPA-205ENST00000508337 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
GYPA-205ENST00000508337 ZPR1O75312 459 aa10.99□□□□□ -0.65
GYPA-205ENST00000508337 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
GYPA-205ENST00000508337 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
GYPA-205ENST00000508337 SPTLC1O15269 473 aa10.98□□□□□ -0.65
GYPA-205ENST00000508337 TLL1O43897 1013 aa10.98□□□□□ -0.65
GYPA-205ENST00000508337 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms