RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
DDR1-262ENST00000508312 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
DDR1-262ENST00000508312 TMF1P82094 1093 aa16.42■□□□□ 0.22
DDR1-262ENST00000508312 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
DDR1-262ENST00000508312 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
DDR1-262ENST00000508312 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
DDR1-262ENST00000508312 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
DDR1-262ENST00000508312 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
DDR1-262ENST00000508312 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.22
DDR1-262ENST00000508312 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
DDR1-262ENST00000508312 ERBINQ96RT1 1412 aa16.38■□□□□ 0.21
DDR1-262ENST00000508312 ARHGEF5Q12774 1597 aa16.38■□□□□ 0.21
DDR1-262ENST00000508312 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
DDR1-262ENST00000508312 KNSTRNQ9Y448 316 aa16.37■□□□□ 0.21
DDR1-262ENST00000508312 SCAPERQ9BY12 1400 aa16.37■□□□□ 0.21
DDR1-262ENST00000508312 LRPPRCP42704 1394 aaKnown RBP16.37■□□□□ 0.21
DDR1-262ENST00000508312 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
DDR1-262ENST00000508312 GGT6Q6P531 493 aa16.36■□□□□ 0.21
DDR1-262ENST00000508312 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
DDR1-262ENST00000508312 ABCC2Q92887 1545 aa16.35■□□□□ 0.21
DDR1-262ENST00000508312 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
DDR1-262ENST00000508312 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
DDR1-262ENST00000508312 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.21
DDR1-262ENST00000508312 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
DDR1-262ENST00000508312 PLCH2O75038 1416 aa16.33■□□□□ 0.21
DDR1-262ENST00000508312 ADGRF5Q8IZF2 1346 aa16.33■□□□□ 0.21
DDR1-262ENST00000508312 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
DDR1-262ENST00000508312 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
DDR1-262ENST00000508312 GOLGA6L3A6NEY3 463 aa16.32■□□□□ 0.2
DDR1-262ENST00000508312 TMEM132EQ6IEE7 984 aa16.32■□□□□ 0.2
DDR1-262ENST00000508312 TRPM1Q7Z4N2 1603 aa16.32■□□□□ 0.2
DDR1-262ENST00000508312 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDR1-262ENST00000508312 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
DDR1-262ENST00000508312 SPRYD3Q8NCJ5 442 aa16.31■□□□□ 0.2
DDR1-262ENST00000508312 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
DDR1-262ENST00000508312 MAGI2Q86UL8 1455 aa16.3■□□□□ 0.2
DDR1-262ENST00000508312 COL17A1Q9UMD9 1497 aaPredicted RBP16.3■□□□□ 0.2
DDR1-262ENST00000508312 BECN1Q14457 450 aa16.3■□□□□ 0.2
DDR1-262ENST00000508312 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDR1-262ENST00000508312 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
DDR1-262ENST00000508312 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
DDR1-262ENST00000508312 CLCN1P35523 988 aa16.27■□□□□ 0.2
DDR1-262ENST00000508312 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
DDR1-262ENST00000508312 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
DDR1-262ENST00000508312 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
DDR1-262ENST00000508312 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.19
DDR1-262ENST00000508312 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.19
DDR1-262ENST00000508312 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
DDR1-262ENST00000508312 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
DDR1-262ENST00000508312 APAF1O14727 1248 aa16.26■□□□□ 0.19
DDR1-262ENST00000508312 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
DDR1-262ENST00000508312 CFAP65Q6ZU64 1925 aaKnown RBP16.24■□□□□ 0.19
DDR1-262ENST00000508312 ATP10AO60312 1499 aa16.24■□□□□ 0.19
DDR1-262ENST00000508312 RAPGEF3O95398 923 aa16.24■□□□□ 0.19
DDR1-262ENST00000508312 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
DDR1-262ENST00000508312 UNC13BO14795 1591 aa16.23■□□□□ 0.19
DDR1-262ENST00000508312 FANCAO15360 1455 aa16.23■□□□□ 0.19
DDR1-262ENST00000508312 A0A0U1RQG5 324 aaPredicted RBP16.22■□□□□ 0.19
DDR1-262ENST00000508312 MAST1Q9Y2H9 1570 aa16.22■□□□□ 0.19
DDR1-262ENST00000508312 PRDM15P57071 1507 aaPredicted RBP16.22■□□□□ 0.19
DDR1-262ENST00000508312 ABCC1P33527 1531 aa16.22■□□□□ 0.19
DDR1-262ENST00000508312 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
DDR1-262ENST00000508312 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
DDR1-262ENST00000508312 BCAR3O75815 825 aa16.21■□□□□ 0.19
DDR1-262ENST00000508312 SEC24BO95487 1268 aa16.21■□□□□ 0.19
DDR1-262ENST00000508312 IQGAP3Q86VI3 1631 aa16.21■□□□□ 0.19
DDR1-262ENST00000508312 TRIM44Q96DX7 344 aaPredicted RBP16.2■□□□□ 0.18
DDR1-262ENST00000508312 E9PCH4 1651 aa16.2■□□□□ 0.18
DDR1-262ENST00000508312 UHRF1BP1LA0JNW5 1464 aa16.2■□□□□ 0.18
DDR1-262ENST00000508312 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
DDR1-262ENST00000508312 STK26Q9P289 416 aa16.2■□□□□ 0.18
DDR1-262ENST00000508312 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
DDR1-262ENST00000508312 ADGRL1O94910 1474 aa16.19■□□□□ 0.18
DDR1-262ENST00000508312 ESPNB1AK53 854 aa16.17■□□□□ 0.18
DDR1-262ENST00000508312 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
DDR1-262ENST00000508312 KANK1Q14678 1352 aa16.17■□□□□ 0.18
DDR1-262ENST00000508312 UPF2Q9HAU5 1272 aaKnown RBP16.17■□□□□ 0.18
DDR1-262ENST00000508312 GOLGA2Q08379 1002 aa16.17■□□□□ 0.18
DDR1-262ENST00000508312 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
DDR1-262ENST00000508312 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
DDR1-262ENST00000508312 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
DDR1-262ENST00000508312 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
DDR1-262ENST00000508312 ZFYVE16Q7Z3T8 1539 aa16.15■□□□□ 0.18
DDR1-262ENST00000508312 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
DDR1-262ENST00000508312 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
DDR1-262ENST00000508312 ARID3AQ99856 593 aa16.14■□□□□ 0.17
DDR1-262ENST00000508312 USP19O94966 1318 aa16.14■□□□□ 0.17
DDR1-262ENST00000508312 NOS1P29475 1434 aa16.13■□□□□ 0.17
DDR1-262ENST00000508312 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
DDR1-262ENST00000508312 MCM4P33991 863 aa16.13■□□□□ 0.17
DDR1-262ENST00000508312 TRAK2O60296 914 aa16.13■□□□□ 0.17
DDR1-262ENST00000508312 MRE11P49959 708 aa16.13■□□□□ 0.17
DDR1-262ENST00000508312 CLUAP1Q96AJ1 413 aa16.12■□□□□ 0.17
DDR1-262ENST00000508312 TNNQ9UQP3 1299 aa16.12■□□□□ 0.17
DDR1-262ENST00000508312 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
DDR1-262ENST00000508312 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
DDR1-262ENST00000508312 ERBB4Q15303 1308 aa16.12■□□□□ 0.17
DDR1-262ENST00000508312 FSD2A1L4K1 749 aa16.11■□□□□ 0.17
DDR1-262ENST00000508312 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
DDR1-262ENST00000508312 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms