RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 UBAP1LF5GYI3 381 aa14.03□□□□□ -0.16
DDX41-209ENST00000508279 SLC26A8Q96RN1 970 aa14.03□□□□□ -0.16
DDX41-209ENST00000508279 RIMS2Q9UQ26 1411 aa14.03□□□□□ -0.16
DDX41-209ENST00000508279 CPS1P31327 1500 aa14.03□□□□□ -0.16
DDX41-209ENST00000508279 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
DDX41-209ENST00000508279 IQSEC2Q5JU85 1478 aa14.01□□□□□ -0.17
DDX41-209ENST00000508279 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
DDX41-209ENST00000508279 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
DDX41-209ENST00000508279 KIF1BO60333 1816 aa14.01□□□□□ -0.17
DDX41-209ENST00000508279 CLTCL1P53675 1640 aa14□□□□□ -0.17
DDX41-209ENST00000508279 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
DDX41-209ENST00000508279 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.98□□□□□ -0.17
DDX41-209ENST00000508279 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
DDX41-209ENST00000508279 TRPM2O94759 1503 aa13.97□□□□□ -0.17
DDX41-209ENST00000508279 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
DDX41-209ENST00000508279 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.18
DDX41-209ENST00000508279 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
DDX41-209ENST00000508279 TOM1O60784 492 aa13.95□□□□□ -0.18
DDX41-209ENST00000508279 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
DDX41-209ENST00000508279 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
DDX41-209ENST00000508279 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
DDX41-209ENST00000508279 RAB3GAP2Q9H2M9 1393 aa13.94□□□□□ -0.18
DDX41-209ENST00000508279 KCNA6P17658 529 aa13.93□□□□□ -0.18
DDX41-209ENST00000508279 PROSER2Q86WR7 435 aaPredicted RBP13.93□□□□□ -0.18
DDX41-209ENST00000508279 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
DDX41-209ENST00000508279 TMEM94Q12767 1356 aa13.89□□□□□ -0.19
DDX41-209ENST00000508279 RGL3Q3MIN7 710 aa13.89□□□□□ -0.19
DDX41-209ENST00000508279 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
DDX41-209ENST00000508279 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
DDX41-209ENST00000508279 CCDC144AA2RUR9 1427 aa13.89□□□□□ -0.19
DDX41-209ENST00000508279 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
DDX41-209ENST00000508279 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
DDX41-209ENST00000508279 DIP2AQ14689 1571 aa13.88□□□□□ -0.19
DDX41-209ENST00000508279 C14orf37Q86TY3 774 aa13.87□□□□□ -0.19
DDX41-209ENST00000508279 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
DDX41-209ENST00000508279 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
DDX41-209ENST00000508279 PPLO60437 1756 aa13.86□□□□□ -0.19
DDX41-209ENST00000508279 NKTRP30414 1462 aaKnown RBP13.86□□□□□ -0.19
DDX41-209ENST00000508279 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
DDX41-209ENST00000508279 SETBP1Q9Y6X0 1596 aa13.84□□□□□ -0.19
DDX41-209ENST00000508279 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
DDX41-209ENST00000508279 HSPA1LP34931 641 aa13.84□□□□□ -0.19
DDX41-209ENST00000508279 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
DDX41-209ENST00000508279 MSH6P52701 1360 aa13.83□□□□□ -0.2
DDX41-209ENST00000508279 PTPRUQ92729 1446 aa13.82□□□□□ -0.2
DDX41-209ENST00000508279 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
DDX41-209ENST00000508279 METP08581 1390 aa13.82□□□□□ -0.2
DDX41-209ENST00000508279 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
DDX41-209ENST00000508279 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
DDX41-209ENST00000508279 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
DDX41-209ENST00000508279 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
DDX41-209ENST00000508279 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
DDX41-209ENST00000508279 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
DDX41-209ENST00000508279 SETD1AO15047 1707 aaKnown RBP13.78□□□□□ -0.2
DDX41-209ENST00000508279 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.78□□□□□ -0.2
DDX41-209ENST00000508279 DISP3Q9P2K9 1392 aa13.77□□□□□ -0.21
DDX41-209ENST00000508279 ATF3P18847 181 aa13.76□□□□□ -0.21
DDX41-209ENST00000508279 HRCP23327 699 aa13.76□□□□□ -0.21
DDX41-209ENST00000508279 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
DDX41-209ENST00000508279 SLAIN2Q9P270 581 aa13.75□□□□□ -0.21
DDX41-209ENST00000508279 C19orf44Q9H6X5 657 aa13.74□□□□□ -0.21
DDX41-209ENST00000508279 STK26Q9P289 416 aa13.74□□□□□ -0.21
DDX41-209ENST00000508279 NCOA3Q9Y6Q9 1424 aa13.73□□□□□ -0.21
DDX41-209ENST00000508279 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
DDX41-209ENST00000508279 KDM2AQ9Y2K7 1162 aa13.73□□□□□ -0.21
DDX41-209ENST00000508279 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
DDX41-209ENST00000508279 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
DDX41-209ENST00000508279 NALCNQ8IZF0 1738 aa13.72□□□□□ -0.21
DDX41-209ENST00000508279 PHLPP1O60346 1717 aa13.71□□□□□ -0.21
DDX41-209ENST00000508279 DCAF11Q8TEB1 546 aa13.7□□□□□ -0.22
DDX41-209ENST00000508279 PIK3C2GO75747 1445 aa13.7□□□□□ -0.22
DDX41-209ENST00000508279 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
DDX41-209ENST00000508279 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
DDX41-209ENST00000508279 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
DDX41-209ENST00000508279 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
DDX41-209ENST00000508279 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
DDX41-209ENST00000508279 MYOM2P54296 1465 aa13.67□□□□□ -0.22
DDX41-209ENST00000508279 ASXL1Q8IXJ9 1541 aa13.66□□□□□ -0.22
DDX41-209ENST00000508279 WAPLQ7Z5K2 1190 aa13.66□□□□□ -0.22
DDX41-209ENST00000508279 DCCP43146 1447 aa13.65□□□□□ -0.22
DDX41-209ENST00000508279 LAMC1P11047 1609 aa13.65□□□□□ -0.22
DDX41-209ENST00000508279 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
DDX41-209ENST00000508279 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
DDX41-209ENST00000508279 LRPPRCP42704 1394 aaKnown RBP13.65□□□□□ -0.22
DDX41-209ENST00000508279 MST1RQ04912 1400 aa13.64□□□□□ -0.23
DDX41-209ENST00000508279 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
DDX41-209ENST00000508279 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
DDX41-209ENST00000508279 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
DDX41-209ENST00000508279 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
DDX41-209ENST00000508279 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
DDX41-209ENST00000508279 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
DDX41-209ENST00000508279 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX41-209ENST00000508279 PLEKHH1Q9ULM0 1364 aa13.62□□□□□ -0.23
DDX41-209ENST00000508279 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
DDX41-209ENST00000508279 ILDR2Q71H61 639 aa13.62□□□□□ -0.23
DDX41-209ENST00000508279 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
DDX41-209ENST00000508279 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
DDX41-209ENST00000508279 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
DDX41-209ENST00000508279 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
DDX41-209ENST00000508279 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms