RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 ST20-MTHFSA0A0A6YYL1 179 aa23.11■■□□□ 1.29
DDX41-207ENST00000507900 TMEM131LA2VDJ0 1609 aa23.1■■□□□ 1.29
DDX41-207ENST00000507900 NEXMIFQ5QGS0 1516 aa23.09■■□□□ 1.29
DDX41-207ENST00000507900 SETBP1Q9Y6X0 1596 aa23.09■■□□□ 1.29
DDX41-207ENST00000507900 ANP32CO43423 234 aa23.08■■□□□ 1.29
DDX41-207ENST00000507900 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.28
DDX41-207ENST00000507900 MYO5BQ9ULV0 1848 aa23.07■■□□□ 1.28
DDX41-207ENST00000507900 PIK3C2GO75747 1445 aa23.07■■□□□ 1.28
DDX41-207ENST00000507900 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
DDX41-207ENST00000507900 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
DDX41-207ENST00000507900 IDI1Q13907 227 aa23.04■■□□□ 1.28
DDX41-207ENST00000507900 ZFYVE9O95405 1425 aa23.03■■□□□ 1.28
DDX41-207ENST00000507900 CHGAP10645 457 aaKnown RBP23.02■■□□□ 1.28
DDX41-207ENST00000507900 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
DDX41-207ENST00000507900 TESK2Q96S53 571 aa23.01■■□□□ 1.27
DDX41-207ENST00000507900 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
DDX41-207ENST00000507900 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
DDX41-207ENST00000507900 EIF3AQ14152 1382 aaKnown RBP22.98■■□□□ 1.27
DDX41-207ENST00000507900 ADGRB1O14514 1584 aa22.98■■□□□ 1.27
DDX41-207ENST00000507900 MLECQ14165 292 aa22.97■■□□□ 1.27
DDX41-207ENST00000507900 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
DDX41-207ENST00000507900 ZMYM3Q14202 1370 aa22.96■■□□□ 1.27
DDX41-207ENST00000507900 CENPBP07199 599 aaPredicted RBP22.96■■□□□ 1.27
DDX41-207ENST00000507900 VGFO15240 615 aaPredicted RBP22.95■■□□□ 1.26
DDX41-207ENST00000507900 C14orf93Q9H972 538 aaKnown RBP22.95■■□□□ 1.26
DDX41-207ENST00000507900 KDM5AP29375 1690 aaKnown RBP22.95■■□□□ 1.26
DDX41-207ENST00000507900 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
DDX41-207ENST00000507900 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
DDX41-207ENST00000507900 TMF1P82094 1093 aa22.92■■□□□ 1.26
DDX41-207ENST00000507900 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
DDX41-207ENST00000507900 YTHDC1Q96MU7 727 aaKnown RBP22.91■■□□□ 1.26
DDX41-207ENST00000507900 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.26
DDX41-207ENST00000507900 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.25
DDX41-207ENST00000507900 PRKRIP1Q9H875 184 aaPredicted RBP22.89■■□□□ 1.25
DDX41-207ENST00000507900 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
DDX41-207ENST00000507900 POLR3GLQ9BT43 218 aa22.87■■□□□ 1.25
DDX41-207ENST00000507900 C3P01024 1663 aa22.86■■□□□ 1.25
DDX41-207ENST00000507900 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
DDX41-207ENST00000507900 TNRQ92752 1358 aa22.85■■□□□ 1.25
DDX41-207ENST00000507900 QRICH2Q9H0J4 1663 aa22.84■■□□□ 1.25
DDX41-207ENST00000507900 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
DDX41-207ENST00000507900 CDCA8Q53HL2 280 aa22.83■■□□□ 1.25
DDX41-207ENST00000507900 UBR1Q8IWV7 1749 aa22.83■■□□□ 1.24
DDX41-207ENST00000507900 MYOM1P52179 1685 aa22.82■■□□□ 1.24
DDX41-207ENST00000507900 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
DDX41-207ENST00000507900 SETD1AO15047 1707 aaKnown RBP22.8■■□□□ 1.24
DDX41-207ENST00000507900 RIMS2Q9UQ26 1411 aa22.8■■□□□ 1.24
DDX41-207ENST00000507900 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
DDX41-207ENST00000507900 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
DDX41-207ENST00000507900 ALKQ9UM73 1620 aa22.8■■□□□ 1.24
DDX41-207ENST00000507900 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
DDX41-207ENST00000507900 CENPJQ9HC77 1338 aaPredicted RBP22.78■■□□□ 1.24
DDX41-207ENST00000507900 NRXN3Q9Y4C0 1643 aa22.75■■□□□ 1.23
DDX41-207ENST00000507900 TMEM132EQ6IEE7 984 aa22.75■■□□□ 1.23
DDX41-207ENST00000507900 PER1O15534 1290 aaPredicted RBP22.74■■□□□ 1.23
DDX41-207ENST00000507900 TRAK1Q9UPV9 953 aa22.73■■□□□ 1.23
DDX41-207ENST00000507900 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
DDX41-207ENST00000507900 PTPRMP28827 1452 aa22.7■■□□□ 1.22
DDX41-207ENST00000507900 YTHDC2Q9H6S0 1430 aaKnown RBP22.7■■□□□ 1.22
DDX41-207ENST00000507900 DLC1Q96QB1 1528 aa22.69■■□□□ 1.22
DDX41-207ENST00000507900 TMEM2Q9UHN6 1383 aa22.69■■□□□ 1.22
DDX41-207ENST00000507900 RALBP1Q15311 655 aa22.69■■□□□ 1.22
DDX41-207ENST00000507900 PANK3Q9H999 370 aa22.69■■□□□ 1.22
DDX41-207ENST00000507900 PARD3Q8TEW0 1356 aa22.68■■□□□ 1.22
DDX41-207ENST00000507900 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
DDX41-207ENST00000507900 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
DDX41-207ENST00000507900 TULP4Q9NRJ4 1543 aa22.66■■□□□ 1.22
DDX41-207ENST00000507900 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
DDX41-207ENST00000507900 PUS7Q96PZ0 661 aaKnown RBP22.66■■□□□ 1.22
DDX41-207ENST00000507900 RIMS1Q86UR5 1692 aaKnown RBP22.66■■□□□ 1.22
DDX41-207ENST00000507900 KNDC1Q76NI1 1749 aa22.65■■□□□ 1.22
DDX41-207ENST00000507900 SLIT1O75093 1534 aa22.65■■□□□ 1.22
DDX41-207ENST00000507900 ARHGAP23Q9P227 1491 aa22.64■■□□□ 1.21
DDX41-207ENST00000507900 CEBPAP49715 358 aaPredicted RBP22.63■■□□□ 1.21
DDX41-207ENST00000507900 MRS2Q9HD23 443 aa22.63■■□□□ 1.21
DDX41-207ENST00000507900 MYBBP1AQ9BQG0 1328 aaKnown RBP22.63■■□□□ 1.21
DDX41-207ENST00000507900 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
DDX41-207ENST00000507900 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
DDX41-207ENST00000507900 BRD4O60885 1362 aaPredicted RBP22.6■■□□□ 1.21
DDX41-207ENST00000507900 ABCC11Q96J66 1382 aa22.59■■□□□ 1.21
DDX41-207ENST00000507900 EVC2Q86UK5 1308 aa22.58■■□□□ 1.21
DDX41-207ENST00000507900 PLEKHG1Q9ULL1 1385 aa22.58■■□□□ 1.21
DDX41-207ENST00000507900 TECPR2O15040 1411 aa22.57■■□□□ 1.2
DDX41-207ENST00000507900 ZNF142P52746 1687 aaPredicted RBP22.57■■□□□ 1.2
DDX41-207ENST00000507900 CEP170BQ9Y4F5 1589 aaPredicted RBP22.56■■□□□ 1.2
DDX41-207ENST00000507900 STK26Q9P289 416 aa22.56■■□□□ 1.2
DDX41-207ENST00000507900 USP32Q8NFA0 1604 aa22.56■■□□□ 1.2
DDX41-207ENST00000507900 CPS1P31327 1500 aa22.56■■□□□ 1.2
DDX41-207ENST00000507900 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
DDX41-207ENST00000507900 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
DDX41-207ENST00000507900 MED14O60244 1454 aa22.55■■□□□ 1.2
DDX41-207ENST00000507900 AMER1Q5JTC6 1135 aaPredicted RBP22.55■■□□□ 1.2
DDX41-207ENST00000507900 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
DDX41-207ENST00000507900 PRAM1Q96QH2 718 aa22.54■■□□□ 1.2
DDX41-207ENST00000507900 METP08581 1390 aa22.53■■□□□ 1.2
DDX41-207ENST00000507900 NINLQ9Y2I6 1382 aa22.53■■□□□ 1.2
DDX41-207ENST00000507900 FAM135BQ49AJ0 1406 aa22.52■■□□□ 1.2
DDX41-207ENST00000507900 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
DDX41-207ENST00000507900 SENP3Q9H4L4 574 aaPredicted RBP22.51■■□□□ 1.19
DDX41-207ENST00000507900 DIP2AQ14689 1571 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms