RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 CLTCL1P53675 1640 aa20.21■□□□□ 0.83
PDCD6-204ENST00000506909 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
PDCD6-204ENST00000506909 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
PDCD6-204ENST00000506909 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
PDCD6-204ENST00000506909 MPHOSPH9Q99550 1183 aa20.19■□□□□ 0.82
PDCD6-204ENST00000506909 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
PDCD6-204ENST00000506909 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
PDCD6-204ENST00000506909 STRCP1A6NGW2 1772 aa20.17■□□□□ 0.82
PDCD6-204ENST00000506909 HRCP23327 699 aa20.17■□□□□ 0.82
PDCD6-204ENST00000506909 CPS1P31327 1500 aa20.17■□□□□ 0.82
PDCD6-204ENST00000506909 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDCD6-204ENST00000506909 PLEKHG1Q9ULL1 1385 aa20.14■□□□□ 0.81
PDCD6-204ENST00000506909 FOXD1Q16676 465 aa20.12■□□□□ 0.81
PDCD6-204ENST00000506909 PPP1R15AO75807 674 aaPredicted RBP20.11■□□□□ 0.81
PDCD6-204ENST00000506909 CHD2O14647 1828 aaKnown RBP20.09■□□□□ 0.81
PDCD6-204ENST00000506909 ZNF326Q5BKZ1 582 aaKnown RBP20.08■□□□□ 0.81
PDCD6-204ENST00000506909 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.81
PDCD6-204ENST00000506909 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
PDCD6-204ENST00000506909 BCANQ96GW7 911 aa20.07■□□□□ 0.8
PDCD6-204ENST00000506909 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
PDCD6-204ENST00000506909 PPLO60437 1756 aa20.06■□□□□ 0.8
PDCD6-204ENST00000506909 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
PDCD6-204ENST00000506909 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
PDCD6-204ENST00000506909 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
PDCD6-204ENST00000506909 XIRP1Q702N8 1843 aaKnown RBP20.04■□□□□ 0.8
PDCD6-204ENST00000506909 ADAMTS13Q76LX8 1427 aa20.04■□□□□ 0.8
PDCD6-204ENST00000506909 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
PDCD6-204ENST00000506909 KCNA6P17658 529 aa20.04■□□□□ 0.8
PDCD6-204ENST00000506909 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
PDCD6-204ENST00000506909 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
PDCD6-204ENST00000506909 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
PDCD6-204ENST00000506909 SETBP1Q9Y6X0 1596 aa20.03■□□□□ 0.8
PDCD6-204ENST00000506909 SPATA31E1Q6ZUB1 1445 aa20.01■□□□□ 0.79
PDCD6-204ENST00000506909 PIK3R4Q99570 1358 aa20■□□□□ 0.79
PDCD6-204ENST00000506909 IFT172Q9UG01 1749 aa20■□□□□ 0.79
PDCD6-204ENST00000506909 VGFO15240 615 aaPredicted RBP20■□□□□ 0.79
PDCD6-204ENST00000506909 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
PDCD6-204ENST00000506909 NKTRP30414 1462 aaKnown RBP19.99■□□□□ 0.79
PDCD6-204ENST00000506909 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
PDCD6-204ENST00000506909 UBAP1LF5GYI3 381 aa19.95■□□□□ 0.78
PDCD6-204ENST00000506909 SETD1AO15047 1707 aaKnown RBP19.94■□□□□ 0.78
PDCD6-204ENST00000506909 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
PDCD6-204ENST00000506909 MED1Q15648 1581 aaPredicted RBP19.94■□□□□ 0.78
PDCD6-204ENST00000506909 TOM1O60784 492 aa19.93■□□□□ 0.78
PDCD6-204ENST00000506909 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
PDCD6-204ENST00000506909 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
PDCD6-204ENST00000506909 TMEM94Q12767 1356 aa19.92■□□□□ 0.78
PDCD6-204ENST00000506909 XRN1Q8IZH2 1706 aaKnown RBP19.91■□□□□ 0.78
PDCD6-204ENST00000506909 ALKQ9UM73 1620 aa19.91■□□□□ 0.78
PDCD6-204ENST00000506909 PTPRUQ92729 1446 aa19.9■□□□□ 0.78
PDCD6-204ENST00000506909 METP08581 1390 aa19.89■□□□□ 0.77
PDCD6-204ENST00000506909 AMOTL2Q9Y2J4 779 aa19.89■□□□□ 0.77
PDCD6-204ENST00000506909 NCOA3Q9Y6Q9 1424 aa19.88■□□□□ 0.77
PDCD6-204ENST00000506909 ADGRF5Q8IZF2 1346 aa19.87■□□□□ 0.77
PDCD6-204ENST00000506909 RBM33Q96EV2 1170 aaKnown RBP19.84■□□□□ 0.77
PDCD6-204ENST00000506909 MYOM2P54296 1465 aa19.84■□□□□ 0.77
PDCD6-204ENST00000506909 PIK3C2GO75747 1445 aa19.83■□□□□ 0.76
PDCD6-204ENST00000506909 MSH6P52701 1360 aa19.83■□□□□ 0.76
PDCD6-204ENST00000506909 NRXN1Q9ULB1 1477 aa19.82■□□□□ 0.76
PDCD6-204ENST00000506909 PIP4K2BP78356 416 aa19.82■□□□□ 0.76
PDCD6-204ENST00000506909 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
PDCD6-204ENST00000506909 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
PDCD6-204ENST00000506909 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
PDCD6-204ENST00000506909 LAMC1P11047 1609 aa19.8■□□□□ 0.76
PDCD6-204ENST00000506909 PRAG1Q86YV5 1406 aa19.8■□□□□ 0.76
PDCD6-204ENST00000506909 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
PDCD6-204ENST00000506909 C19orf44Q9H6X5 657 aa19.78■□□□□ 0.76
PDCD6-204ENST00000506909 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
PDCD6-204ENST00000506909 C14orf37Q86TY3 774 aa19.76■□□□□ 0.75
PDCD6-204ENST00000506909 DCAF11Q8TEB1 546 aa19.76■□□□□ 0.75
PDCD6-204ENST00000506909 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
PDCD6-204ENST00000506909 KNDC1Q76NI1 1749 aa19.76■□□□□ 0.75
PDCD6-204ENST00000506909 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
PDCD6-204ENST00000506909 ASXL1Q8IXJ9 1541 aa19.75■□□□□ 0.75
PDCD6-204ENST00000506909 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
PDCD6-204ENST00000506909 NALCNQ8IZF0 1738 aa19.74■□□□□ 0.75
PDCD6-204ENST00000506909 HSPA1LP34931 641 aa19.74■□□□□ 0.75
PDCD6-204ENST00000506909 DCCP43146 1447 aa19.74■□□□□ 0.75
PDCD6-204ENST00000506909 ROBO1Q9Y6N7 1651 aa19.73■□□□□ 0.75
PDCD6-204ENST00000506909 CADPS2Q86UW7 1296 aa19.73■□□□□ 0.75
PDCD6-204ENST00000506909 SLAIN2Q9P270 581 aa19.73■□□□□ 0.75
PDCD6-204ENST00000506909 TECPR2O15040 1411 aa19.73■□□□□ 0.75
PDCD6-204ENST00000506909 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
PDCD6-204ENST00000506909 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
PDCD6-204ENST00000506909 LRPPRCP42704 1394 aaKnown RBP19.71■□□□□ 0.75
PDCD6-204ENST00000506909 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
PDCD6-204ENST00000506909 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
PDCD6-204ENST00000506909 ATF3P18847 181 aa19.71■□□□□ 0.75
PDCD6-204ENST00000506909 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
PDCD6-204ENST00000506909 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
PDCD6-204ENST00000506909 YTHDC2Q9H6S0 1430 aaKnown RBP19.69■□□□□ 0.74
PDCD6-204ENST00000506909 SIRT1Q96EB6 747 aa19.67■□□□□ 0.74
PDCD6-204ENST00000506909 STK26Q9P289 416 aa19.67■□□□□ 0.74
PDCD6-204ENST00000506909 KIAA1210Q9ULL0 1709 aa19.67■□□□□ 0.74
PDCD6-204ENST00000506909 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
PDCD6-204ENST00000506909 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
PDCD6-204ENST00000506909 MST1RQ04912 1400 aa19.63■□□□□ 0.73
PDCD6-204ENST00000506909 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
PDCD6-204ENST00000506909 DLC1Q96QB1 1528 aa19.62■□□□□ 0.73
PDCD6-204ENST00000506909 WAPLQ7Z5K2 1190 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms