RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 KIAA1210Q9ULL0 1709 aa28.52■■■□□ 2.16
TTC39B-204ENST00000505732 CAMSAP1Q5T5Y3 1602 aa28.51■■■□□ 2.15
TTC39B-204ENST00000505732 NOS1P29475 1434 aa28.5■■■□□ 2.15
TTC39B-204ENST00000505732 NRXN1Q9ULB1 1477 aa28.49■■■□□ 2.15
TTC39B-204ENST00000505732 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
TTC39B-204ENST00000505732 PANK3Q9H999 370 aa28.49■■■□□ 2.15
TTC39B-204ENST00000505732 MYBBP1AQ9BQG0 1328 aaKnown RBP28.48■■■□□ 2.15
TTC39B-204ENST00000505732 ZMYM4Q5VZL5 1548 aa28.48■■■□□ 2.15
TTC39B-204ENST00000505732 TMC1Q8TDI8 760 aa28.48■■■□□ 2.15
TTC39B-204ENST00000505732 EIF3AQ14152 1382 aaKnown RBP28.47■■■□□ 2.15
TTC39B-204ENST00000505732 ARHGAP31Q2M1Z3 1444 aa28.47■■■□□ 2.15
TTC39B-204ENST00000505732 TSPOAP1O95153 1857 aa28.46■■■□□ 2.15
TTC39B-204ENST00000505732 PNISRQ8TF01 805 aaKnown RBP28.44■■■□□ 2.14
TTC39B-204ENST00000505732 ZBED9Q6R2W3 1325 aa28.44■■■□□ 2.14
TTC39B-204ENST00000505732 FKBP8Q14318 412 aa28.44■■■□□ 2.14
TTC39B-204ENST00000505732 RPGRIP1LQ68CZ1 1315 aa28.44■■■□□ 2.14
TTC39B-204ENST00000505732 SIGLEC1Q9BZZ2 1709 aa28.44■■■□□ 2.14
TTC39B-204ENST00000505732 CDCA8Q53HL2 280 aa28.43■■■□□ 2.14
TTC39B-204ENST00000505732 BRD4O60885 1362 aaPredicted RBP28.43■■■□□ 2.14
TTC39B-204ENST00000505732 PARD3Q8TEW0 1356 aa28.43■■■□□ 2.14
TTC39B-204ENST00000505732 ZC3H13Q5T200 1668 aaKnown RBP28.41■■■□□ 2.14
TTC39B-204ENST00000505732 SYNMO15061 1565 aa28.4■■■□□ 2.14
TTC39B-204ENST00000505732 NEFLP07196 543 aa28.4■■■□□ 2.14
TTC39B-204ENST00000505732 PIK3C2GO75747 1445 aa28.37■■■□□ 2.13
TTC39B-204ENST00000505732 CC2D1BQ5T0F9 858 aaKnown RBP28.37■■■□□ 2.13
TTC39B-204ENST00000505732 C14orf93Q9H972 538 aaKnown RBP28.37■■■□□ 2.13
TTC39B-204ENST00000505732 PIK3C2BO00750 1634 aa28.37■■■□□ 2.13
TTC39B-204ENST00000505732 PPLO60437 1756 aa28.36■■■□□ 2.13
TTC39B-204ENST00000505732 IDI1Q13907 227 aa28.36■■■□□ 2.13
TTC39B-204ENST00000505732 SLC24A1O60721 1099 aa28.36■■■□□ 2.13
TTC39B-204ENST00000505732 NLRP13Q86W25 1043 aa28.36■■■□□ 2.13
TTC39B-204ENST00000505732 SLC52A1Q9NWF4 448 aa28.34■■■□□ 2.13
TTC39B-204ENST00000505732 SETBP1Q9Y6X0 1596 aa28.32■■■□□ 2.12
TTC39B-204ENST00000505732 LRPPRCP42704 1394 aaKnown RBP28.31■■■□□ 2.12
TTC39B-204ENST00000505732 VGFO15240 615 aaPredicted RBP28.3■■■□□ 2.12
TTC39B-204ENST00000505732 NUTM2DQ5VT03 806 aaPredicted RBP28.29■■■□□ 2.12
TTC39B-204ENST00000505732 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
TTC39B-204ENST00000505732 BCANQ96GW7 911 aa28.28■■■□□ 2.12
TTC39B-204ENST00000505732 KNSTRNQ9Y448 316 aa28.28■■■□□ 2.12
TTC39B-204ENST00000505732 TRAK1Q9UPV9 953 aa28.27■■■□□ 2.12
TTC39B-204ENST00000505732 TMEM132EQ6IEE7 984 aa28.27■■■□□ 2.12
TTC39B-204ENST00000505732 ERVK-7P63135 1459 aa28.27■■■□□ 2.12
TTC39B-204ENST00000505732 AGLP35573 1532 aa28.27■■■□□ 2.12
TTC39B-204ENST00000505732 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
TTC39B-204ENST00000505732 PPP6R1Q9UPN7 881 aa28.26■■■□□ 2.11
TTC39B-204ENST00000505732 NEXMIFQ5QGS0 1516 aa28.26■■■□□ 2.11
TTC39B-204ENST00000505732 CENPJQ9HC77 1338 aaPredicted RBP28.25■■■□□ 2.11
TTC39B-204ENST00000505732 ADGRB1O14514 1584 aa28.25■■■□□ 2.11
TTC39B-204ENST00000505732 SBNO2Q9Y2G9 1366 aa28.25■■■□□ 2.11
TTC39B-204ENST00000505732 PREX1Q8TCU6 1659 aa28.24■■■□□ 2.11
TTC39B-204ENST00000505732 KIF13AQ9H1H9 1805 aa28.24■■■□□ 2.11
TTC39B-204ENST00000505732 MYO3AQ8NEV4 1616 aa28.23■■■□□ 2.11
TTC39B-204ENST00000505732 AMER1Q5JTC6 1135 aaPredicted RBP28.23■■■□□ 2.11
TTC39B-204ENST00000505732 KDM5AP29375 1690 aaKnown RBP28.22■■■□□ 2.11
TTC39B-204ENST00000505732 MYOM1P52179 1685 aa28.2■■■□□ 2.1
TTC39B-204ENST00000505732 ZFYVE9O95405 1425 aa28.18■■■□□ 2.1
TTC39B-204ENST00000505732 SENP3-EIF4A1A0A087X0R7 540 aa28.18■■■□□ 2.1
TTC39B-204ENST00000505732 MLECQ14165 292 aa28.17■■■□□ 2.1
TTC39B-204ENST00000505732 TMEM131LA2VDJ0 1609 aa28.16■■■□□ 2.1
TTC39B-204ENST00000505732 ASXL1Q8IXJ9 1541 aa28.15■■■□□ 2.1
TTC39B-204ENST00000505732 SMG6Q86US8 1419 aaKnown RBP28.14■■■□□ 2.1
TTC39B-204ENST00000505732 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.1
TTC39B-204ENST00000505732 NPC1L1Q9UHC9 1359 aa28.13■■■□□ 2.09
TTC39B-204ENST00000505732 PPP2R1AP30153 589 aa28.12■■■□□ 2.09
TTC39B-204ENST00000505732 ARHGEF40Q8TER5 1519 aa28.11■■■□□ 2.09
TTC39B-204ENST00000505732 MYO5BQ9ULV0 1848 aa28.11■■■□□ 2.09
TTC39B-204ENST00000505732 IRX6P78412 446 aaPredicted RBP28.1■■■□□ 2.09
TTC39B-204ENST00000505732 NUDCQ9Y266 331 aa28.1■■■□□ 2.09
TTC39B-204ENST00000505732 CLTCQ00610 1675 aaKnown RBP28.1■■■□□ 2.09
TTC39B-204ENST00000505732 CARD14Q9BXL6 1004 aa28.1■■■□□ 2.09
TTC39B-204ENST00000505732 STAG3Q9UJ98 1225 aa28.09■■■□□ 2.09
TTC39B-204ENST00000505732 QRICH2Q9H0J4 1663 aa28.09■■■□□ 2.09
TTC39B-204ENST00000505732 SENP3Q9H4L4 574 aaPredicted RBP28.08■■■□□ 2.09
TTC39B-204ENST00000505732 INSRP06213 1382 aa28.04■■■□□ 2.08
TTC39B-204ENST00000505732 SPATA31D1Q6ZQQ2 1576 aa28.03■■■□□ 2.08
TTC39B-204ENST00000505732 SLC12A5Q9H2X9 1139 aa28.02■■■□□ 2.08
TTC39B-204ENST00000505732 STK26Q9P289 416 aa28.02■■■□□ 2.08
TTC39B-204ENST00000505732 ESF1Q9H501 851 aaKnown RBP28.01■■■□□ 2.07
TTC39B-204ENST00000505732 EVC2Q86UK5 1308 aa28.01■■■□□ 2.07
TTC39B-204ENST00000505732 ARHGEF28Q8N1W1 1705 aaKnown RBP28.01■■■□□ 2.07
TTC39B-204ENST00000505732 ERICH6BQ5W0A0 696 aa28■■■□□ 2.07
TTC39B-204ENST00000505732 SALL2Q9Y467 1007 aaPredicted RBP28■■■□□ 2.07
TTC39B-204ENST00000505732 PUS7Q96PZ0 661 aaKnown RBP27.99■■■□□ 2.07
TTC39B-204ENST00000505732 BLMP54132 1417 aaPredicted RBP27.99■■■□□ 2.07
TTC39B-204ENST00000505732 ZMYM3Q14202 1370 aa27.98■■■□□ 2.07
TTC39B-204ENST00000505732 ADAMTS8Q9UP79 889 aa27.98■■■□□ 2.07
TTC39B-204ENST00000505732 A2ML1A8K2U0 1454 aa27.97■■■□□ 2.07
TTC39B-204ENST00000505732 SAFB2Q14151 953 aaKnown RBP eCLIP27.97■■■□□ 2.07
TTC39B-204ENST00000505732 TULP4Q9NRJ4 1543 aa27.94■■■□□ 2.06
TTC39B-204ENST00000505732 WDR43Q15061 677 aaKnown RBP eCLIP27.93■■■□□ 2.06
TTC39B-204ENST00000505732 NSD3Q9BZ95 1437 aa27.93■■■□□ 2.06
TTC39B-204ENST00000505732 YTHDC2Q9H6S0 1430 aaKnown RBP27.93■■■□□ 2.06
TTC39B-204ENST00000505732 PDE3BQ13370 1112 aa27.93■■■□□ 2.06
TTC39B-204ENST00000505732 ALKQ9UM73 1620 aa27.93■■■□□ 2.06
TTC39B-204ENST00000505732 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
TTC39B-204ENST00000505732 RIMS2Q9UQ26 1411 aa27.91■■■□□ 2.06
TTC39B-204ENST00000505732 PTPRMP28827 1452 aa27.9■■■□□ 2.06
TTC39B-204ENST00000505732 RNF123Q5XPI4 1314 aa27.9■■■□□ 2.06
TTC39B-204ENST00000505732 PRAM1Q96QH2 718 aa27.9■■■□□ 2.06
TTC39B-204ENST00000505732 POGKQ9P215 609 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms