RNA–Protein interactions for RNA: ENST00000505614.1

NDFIP1-203, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 3

Gene NDFIP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-203ENST00000505614 FAM98CQ17RN3 349 aaKnown RBP10.53□□□□□ -0.72
NDFIP1-203ENST00000505614 ADGRD1Q6QNK2 874 aa10.52□□□□□ -0.73
NDFIP1-203ENST00000505614 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
NDFIP1-203ENST00000505614 TMEM134Q9H6X4 195 aa10.52□□□□□ -0.73
NDFIP1-203ENST00000505614 RSPH4AQ5TD94 716 aa10.51□□□□□ -0.73
NDFIP1-203ENST00000505614 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
NDFIP1-203ENST00000505614 SMAPO00193 183 aa10.5□□□□□ -0.73
NDFIP1-203ENST00000505614 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
NDFIP1-203ENST00000505614 MRPL50Q8N5N7 158 aaKnown RBP10.5□□□□□ -0.73
NDFIP1-203ENST00000505614 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
NDFIP1-203ENST00000505614 C3orf80F5H4A9 247 aa10.49□□□□□ -0.73
NDFIP1-203ENST00000505614 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
NDFIP1-203ENST00000505614 SEPT9Q9UHD8 586 aaPredicted RBP10.48□□□□□ -0.73
NDFIP1-203ENST00000505614 NLRP7Q8WX94 980 aa10.47□□□□□ -0.73
NDFIP1-203ENST00000505614 HRO43593 1189 aa10.46□□□□□ -0.73
NDFIP1-203ENST00000505614 IL27Q8NEV9 243 aa10.46□□□□□ -0.73
NDFIP1-203ENST00000505614 GOLGA8CPA6NN73 597 aa10.45□□□□□ -0.74
NDFIP1-203ENST00000505614 DIXDC1Q155Q3 683 aa10.45□□□□□ -0.74
NDFIP1-203ENST00000505614 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
NDFIP1-203ENST00000505614 FAM117AQ9C073 453 aa10.45□□□□□ -0.74
NDFIP1-203ENST00000505614 MS4A1P11836 297 aa10.44□□□□□ -0.74
NDFIP1-203ENST00000505614 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
NDFIP1-203ENST00000505614 ZFRQ96KR1 1074 aaKnown RBP10.44□□□□□ -0.74
NDFIP1-203ENST00000505614 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
NDFIP1-203ENST00000505614 SWT1Q5T5J6 900 aaKnown RBP10.43□□□□□ -0.74
NDFIP1-203ENST00000505614 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
NDFIP1-203ENST00000505614 DDX11L8A8MPP1 907 aa10.42□□□□□ -0.74
NDFIP1-203ENST00000505614 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
NDFIP1-203ENST00000505614 CD46P15529 392 aa10.4□□□□□ -0.74
NDFIP1-203ENST00000505614 SAMD7Q7Z3H4 446 aa10.4□□□□□ -0.74
NDFIP1-203ENST00000505614 RDH13Q8NBN7 331 aa10.4□□□□□ -0.74
NDFIP1-203ENST00000505614 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
NDFIP1-203ENST00000505614 LRCH3Q96II8 777 aa10.4□□□□□ -0.74
NDFIP1-203ENST00000505614 PLEKHG3A1L390 1219 aa10.39□□□□□ -0.75
NDFIP1-203ENST00000505614 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
NDFIP1-203ENST00000505614 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
NDFIP1-203ENST00000505614 USP46P62068 366 aa10.35□□□□□ -0.75
NDFIP1-203ENST00000505614 WNT2BQ93097 391 aa10.35□□□□□ -0.75
NDFIP1-203ENST00000505614 PRR14Q9BWN1 585 aa10.35□□□□□ -0.75
NDFIP1-203ENST00000505614 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
NDFIP1-203ENST00000505614 RNF40O75150 1001 aa10.34□□□□□ -0.75
NDFIP1-203ENST00000505614 GCGRP47871 477 aa10.34□□□□□ -0.75
NDFIP1-203ENST00000505614 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
NDFIP1-203ENST00000505614 SKIV2LQ15477 1246 aaKnown RBP10.33□□□□□ -0.76
NDFIP1-203ENST00000505614 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
NDFIP1-203ENST00000505614 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
NDFIP1-203ENST00000505614 KDM4AO75164 1064 aa10.32□□□□□ -0.76
NDFIP1-203ENST00000505614 SLC10A3P09131 477 aa10.32□□□□□ -0.76
NDFIP1-203ENST00000505614 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
NDFIP1-203ENST00000505614 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
NDFIP1-203ENST00000505614 PPP4CP60510 307 aa10.31□□□□□ -0.76
NDFIP1-203ENST00000505614 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
NDFIP1-203ENST00000505614 HCSTQ9UBK5 93 aa10.31□□□□□ -0.76
NDFIP1-203ENST00000505614 GJA5P36382 358 aa10.3□□□□□ -0.76
NDFIP1-203ENST00000505614 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
NDFIP1-203ENST00000505614 CFHP08603 1231 aa10.29□□□□□ -0.76
NDFIP1-203ENST00000505614 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
NDFIP1-203ENST00000505614 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
NDFIP1-203ENST00000505614 HPS5Q9UPZ3 1129 aa10.28□□□□□ -0.76
NDFIP1-203ENST00000505614 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
NDFIP1-203ENST00000505614 TUSC1Q2TAM9 212 aa10.27□□□□□ -0.77
NDFIP1-203ENST00000505614 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
NDFIP1-203ENST00000505614 CLK2P49760 499 aaKnown RBP10.26□□□□□ -0.77
NDFIP1-203ENST00000505614 BCAMP50895 628 aa10.26□□□□□ -0.77
NDFIP1-203ENST00000505614 NYAP1Q6ZVC0 841 aa10.26□□□□□ -0.77
NDFIP1-203ENST00000505614 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
NDFIP1-203ENST00000505614 SPTLC1O15269 473 aa10.25□□□□□ -0.77
NDFIP1-203ENST00000505614 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
NDFIP1-203ENST00000505614 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
NDFIP1-203ENST00000505614 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
NDFIP1-203ENST00000505614 ACTN4O43707 911 aaKnown RBP10.24□□□□□ -0.77
NDFIP1-203ENST00000505614 HOXA2O43364 376 aa10.23□□□□□ -0.77
NDFIP1-203ENST00000505614 RSBN1LQ6PCB5 846 aaPredicted RBP10.23□□□□□ -0.77
NDFIP1-203ENST00000505614 ERICH6Q7L0X2 663 aa10.23□□□□□ -0.77
NDFIP1-203ENST00000505614 MOXD2PA6NHM9 499 aa10.22□□□□□ -0.77
NDFIP1-203ENST00000505614 FUT2Q10981 343 aa10.22□□□□□ -0.77
NDFIP1-203ENST00000505614 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
NDFIP1-203ENST00000505614 FDX1P10109 184 aa10.2□□□□□ -0.78
NDFIP1-203ENST00000505614 PRPF38BQ5VTL8 546 aaKnown RBP10.2□□□□□ -0.78
NDFIP1-203ENST00000505614 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
NDFIP1-203ENST00000505614 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.19□□□□□ -0.78
NDFIP1-203ENST00000505614 LIMD1Q9UGP4 676 aa10.19□□□□□ -0.78
NDFIP1-203ENST00000505614 NDUFV2P19404 249 aa10.18□□□□□ -0.78
NDFIP1-203ENST00000505614 PTPN5P54829 565 aa10.18□□□□□ -0.78
NDFIP1-203ENST00000505614 Q3C1V9 767 aa10.18□□□□□ -0.78
NDFIP1-203ENST00000505614 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
NDFIP1-203ENST00000505614 SPDYE5A6NIY4 337 aa10.17□□□□□ -0.78
NDFIP1-203ENST00000505614 APLP1P51693 650 aa10.17□□□□□ -0.78
NDFIP1-203ENST00000505614 PCDHB3Q9Y5E6 796 aa10.17□□□□□ -0.78
NDFIP1-203ENST00000505614 NR1I2O75469 434 aa10.16□□□□□ -0.78
NDFIP1-203ENST00000505614 MORN1Q5T089 497 aa10.16□□□□□ -0.78
NDFIP1-203ENST00000505614 PPP2R2DQ66LE6 453 aa10.16□□□□□ -0.78
NDFIP1-203ENST00000505614 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
NDFIP1-203ENST00000505614 NUTM2BA6NNL0 878 aaPredicted RBP10.14□□□□□ -0.79
NDFIP1-203ENST00000505614 NUTM2EB1AL46 878 aaPredicted RBP10.14□□□□□ -0.79
NDFIP1-203ENST00000505614 LILRB3O75022 631 aa10.14□□□□□ -0.79
NDFIP1-203ENST00000505614 TMEM259Q4ZIN3 620 aa10.14□□□□□ -0.79
NDFIP1-203ENST00000505614 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
NDFIP1-203ENST00000505614 NUTM2AQ8IVF1 878 aaPredicted RBP10.14□□□□□ -0.79
NDFIP1-203ENST00000505614 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms