RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 APLP2Q06481 763 aa9.17□□□□□ -0.94
GYPB-205ENST00000505583 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
GYPB-205ENST00000505583 ADGRB3O60242 1522 aa9.16□□□□□ -0.94
GYPB-205ENST00000505583 ADGRL2O95490 1459 aa9.16□□□□□ -0.94
GYPB-205ENST00000505583 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
GYPB-205ENST00000505583 EID1Q9Y6B2 187 aa9.16□□□□□ -0.94
GYPB-205ENST00000505583 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.94
GYPB-205ENST00000505583 STAG3Q9UJ98 1225 aa9.15□□□□□ -0.94
GYPB-205ENST00000505583 GCC2Q8IWJ2 1684 aa9.15□□□□□ -0.94
GYPB-205ENST00000505583 TMEM94Q12767 1356 aa9.14□□□□□ -0.95
GYPB-205ENST00000505583 ROBO1Q9Y6N7 1651 aa9.14□□□□□ -0.95
GYPB-205ENST00000505583 FAM50AQ14320 339 aaKnown RBP9.14□□□□□ -0.95
GYPB-205ENST00000505583 NWD1Q149M9 1564 aa9.14□□□□□ -0.95
GYPB-205ENST00000505583 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
GYPB-205ENST00000505583 KCNA6P17658 529 aa9.13□□□□□ -0.95
GYPB-205ENST00000505583 E9PCH4 1651 aa9.13□□□□□ -0.95
GYPB-205ENST00000505583 ZFYVE9O95405 1425 aa9.13□□□□□ -0.95
GYPB-205ENST00000505583 ANKRD50Q9ULJ7 1429 aa9.13□□□□□ -0.95
GYPB-205ENST00000505583 CHD2O14647 1828 aaKnown RBP9.12□□□□□ -0.95
GYPB-205ENST00000505583 UNC13BO14795 1591 aa9.12□□□□□ -0.95
GYPB-205ENST00000505583 FAM135BQ49AJ0 1406 aa9.12□□□□□ -0.95
GYPB-205ENST00000505583 RPRD2Q5VT52 1461 aaKnown RBP9.11□□□□□ -0.95
GYPB-205ENST00000505583 PROSER2Q86WR7 435 aaPredicted RBP9.11□□□□□ -0.95
GYPB-205ENST00000505583 NKTRP30414 1462 aaKnown RBP9.1□□□□□ -0.95
GYPB-205ENST00000505583 SLC52A1Q9NWF4 448 aa9.1□□□□□ -0.95
GYPB-205ENST00000505583 RIMS2Q9UQ26 1411 aa9.09□□□□□ -0.95
GYPB-205ENST00000505583 IQGAP3Q86VI3 1631 aa9.09□□□□□ -0.95
GYPB-205ENST00000505583 PHLPP1O60346 1717 aa9.08□□□□□ -0.96
GYPB-205ENST00000505583 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
GYPB-205ENST00000505583 BCANQ96GW7 911 aa9.08□□□□□ -0.96
GYPB-205ENST00000505583 FOXD4L1Q9NU39 408 aa9.08□□□□□ -0.96
GYPB-205ENST00000505583 PLEKHG1Q9ULL1 1385 aa9.08□□□□□ -0.96
GYPB-205ENST00000505583 ADAMTS13Q76LX8 1427 aa9.07□□□□□ -0.96
GYPB-205ENST00000505583 POTEAQ6S8J7 498 aa9.07□□□□□ -0.96
GYPB-205ENST00000505583 SLAIN2Q9P270 581 aa9.06□□□□□ -0.96
GYPB-205ENST00000505583 MSH6P52701 1360 aa9.06□□□□□ -0.96
GYPB-205ENST00000505583 COL16A1Q07092 1604 aaPredicted RBP9.05□□□□□ -0.96
GYPB-205ENST00000505583 SETD1AO15047 1707 aaKnown RBP9.05□□□□□ -0.96
GYPB-205ENST00000505583 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.05□□□□□ -0.96
GYPB-205ENST00000505583 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
GYPB-205ENST00000505583 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
GYPB-205ENST00000505583 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
GYPB-205ENST00000505583 NRXN3Q9Y4C0 1643 aa9.05□□□□□ -0.96
GYPB-205ENST00000505583 ROCK1Q13464 1354 aa9.04□□□□□ -0.96
GYPB-205ENST00000505583 ITGAEP38570 1179 aa9.04□□□□□ -0.96
GYPB-205ENST00000505583 TBX22Q9Y458 520 aa9.04□□□□□ -0.96
GYPB-205ENST00000505583 PTPRUQ92729 1446 aa9.04□□□□□ -0.96
GYPB-205ENST00000505583 SPHKAPQ2M3C7 1700 aa9.03□□□□□ -0.96
GYPB-205ENST00000505583 NUP155O75694 1391 aa9.03□□□□□ -0.96
GYPB-205ENST00000505583 DIP2AQ14689 1571 aa9.03□□□□□ -0.96
GYPB-205ENST00000505583 LRP6O75581 1613 aa9.02□□□□□ -0.96
GYPB-205ENST00000505583 XRN1Q8IZH2 1706 aaKnown RBP9.02□□□□□ -0.97
GYPB-205ENST00000505583 SLC4A2P04920 1241 aa9.01□□□□□ -0.97
GYPB-205ENST00000505583 HDGFP51858 240 aaKnown RBP9.01□□□□□ -0.97
GYPB-205ENST00000505583 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.01□□□□□ -0.97
GYPB-205ENST00000505583 TRPM2O94759 1503 aa9□□□□□ -0.97
GYPB-205ENST00000505583 JCADQ9P266 1359 aa9□□□□□ -0.97
GYPB-205ENST00000505583 NCOA3Q9Y6Q9 1424 aa9□□□□□ -0.97
GYPB-205ENST00000505583 C14orf37Q86TY3 774 aa9□□□□□ -0.97
GYPB-205ENST00000505583 AMOTL2Q9Y2J4 779 aa9□□□□□ -0.97
GYPB-205ENST00000505583 CLTCL1P53675 1640 aa9□□□□□ -0.97
GYPB-205ENST00000505583 AHDC1Q5TGY3 1603 aaPredicted RBP9□□□□□ -0.97
GYPB-205ENST00000505583 SHPRHQ149N8 1683 aa9□□□□□ -0.97
GYPB-205ENST00000505583 PIK3R4Q99570 1358 aa8.99□□□□□ -0.97
GYPB-205ENST00000505583 SETBP1Q9Y6X0 1596 aa8.99□□□□□ -0.97
GYPB-205ENST00000505583 C19orf44Q9H6X5 657 aa8.99□□□□□ -0.97
GYPB-205ENST00000505583 METP08581 1390 aa8.99□□□□□ -0.97
GYPB-205ENST00000505583 NEXMIFQ5QGS0 1516 aa8.98□□□□□ -0.97
GYPB-205ENST00000505583 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
GYPB-205ENST00000505583 ATF3P18847 181 aa8.97□□□□□ -0.97
GYPB-205ENST00000505583 BRINP3Q76B58 766 aa8.97□□□□□ -0.97
GYPB-205ENST00000505583 CADPS2Q86UW7 1296 aa8.97□□□□□ -0.97
GYPB-205ENST00000505583 NHSL1Q5SYE7 1610 aa8.97□□□□□ -0.97
GYPB-205ENST00000505583 ASXL1Q8IXJ9 1541 aa8.96□□□□□ -0.97
GYPB-205ENST00000505583 KIF1BO60333 1816 aa8.96□□□□□ -0.98
GYPB-205ENST00000505583 MST1RQ04912 1400 aa8.96□□□□□ -0.98
GYPB-205ENST00000505583 DCAF8L1A6NGE4 600 aa8.95□□□□□ -0.98
GYPB-205ENST00000505583 ZNF326Q5BKZ1 582 aaKnown RBP8.95□□□□□ -0.98
GYPB-205ENST00000505583 DDX17Q92841 729 aaKnown RBP8.95□□□□□ -0.98
GYPB-205ENST00000505583 SPATA31A6Q5VVP1 1343 aa8.95□□□□□ -0.98
GYPB-205ENST00000505583 NAIPQ13075 1403 aa8.95□□□□□ -0.98
GYPB-205ENST00000505583 DCCP43146 1447 aa8.94□□□□□ -0.98
GYPB-205ENST00000505583 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
GYPB-205ENST00000505583 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
GYPB-205ENST00000505583 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
GYPB-205ENST00000505583 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
GYPB-205ENST00000505583 ADGRL3Q9HAR2 1447 aa8.93□□□□□ -0.98
GYPB-205ENST00000505583 RRBP1Q9P2E9 1410 aaKnown RBP8.93□□□□□ -0.98
GYPB-205ENST00000505583 SETD5Q9C0A6 1442 aa8.92□□□□□ -0.98
GYPB-205ENST00000505583 MEX3CQ5U5Q3 659 aaKnown RBP8.92□□□□□ -0.98
GYPB-205ENST00000505583 PPLO60437 1756 aa8.91□□□□□ -0.98
GYPB-205ENST00000505583 LAMC1P11047 1609 aa8.91□□□□□ -0.98
GYPB-205ENST00000505583 ROBO2Q9HCK4 1378 aa8.9□□□□□ -0.98
GYPB-205ENST00000505583 ZNF772Q68DY9 489 aaPredicted RBP8.9□□□□□ -0.98
GYPB-205ENST00000505583 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
GYPB-205ENST00000505583 RNF39Q9H2S5 420 aa8.9□□□□□ -0.98
GYPB-205ENST00000505583 PNPLA6Q8IY17 1366 aa8.89□□□□□ -0.99
GYPB-205ENST00000505583 AFF2P51816 1311 aa8.89□□□□□ -0.99
GYPB-205ENST00000505583 C1orf167Q5SNV9 1468 aa8.89□□□□□ -0.99
GYPB-205ENST00000505583 RXRBP28702 533 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms