RNA–Protein interactions for RNA: ENST00000505221.5

PDCD6-202, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-202ENST00000505221 TMEM2Q9UHN6 1383 aa22.86■■□□□ 1.25
PDCD6-202ENST00000505221 HSPA2P54652 639 aa22.85■■□□□ 1.25
PDCD6-202ENST00000505221 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
PDCD6-202ENST00000505221 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
PDCD6-202ENST00000505221 NEURL4Q96JN8 1562 aa22.84■■□□□ 1.25
PDCD6-202ENST00000505221 UBR1Q8IWV7 1749 aa22.83■■□□□ 1.25
PDCD6-202ENST00000505221 NUTM2DQ5VT03 806 aaPredicted RBP22.83■■□□□ 1.25
PDCD6-202ENST00000505221 BCANQ96GW7 911 aa22.83■■□□□ 1.25
PDCD6-202ENST00000505221 ZNF142P52746 1687 aaPredicted RBP22.83■■□□□ 1.24
PDCD6-202ENST00000505221 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
PDCD6-202ENST00000505221 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
PDCD6-202ENST00000505221 LTKP29376 864 aa22.78■■□□□ 1.24
PDCD6-202ENST00000505221 SLIT1O75093 1534 aa22.77■■□□□ 1.24
PDCD6-202ENST00000505221 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
PDCD6-202ENST00000505221 NCKAP5LQ9HCH0 1330 aa22.76■■□□□ 1.23
PDCD6-202ENST00000505221 ZFYVE9O95405 1425 aa22.75■■□□□ 1.23
PDCD6-202ENST00000505221 ZEB1P37275 1124 aaPredicted RBP22.74■■□□□ 1.23
PDCD6-202ENST00000505221 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
PDCD6-202ENST00000505221 MYO5BQ9ULV0 1848 aa22.73■■□□□ 1.23
PDCD6-202ENST00000505221 ADGRF5Q8IZF2 1346 aa22.73■■□□□ 1.23
PDCD6-202ENST00000505221 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
PDCD6-202ENST00000505221 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
PDCD6-202ENST00000505221 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
PDCD6-202ENST00000505221 MYOM2P54296 1465 aa22.69■■□□□ 1.22
PDCD6-202ENST00000505221 PLEKHG1Q9ULL1 1385 aa22.69■■□□□ 1.22
PDCD6-202ENST00000505221 NPHP4O75161 1426 aaPredicted RBP22.66■■□□□ 1.22
PDCD6-202ENST00000505221 PPLO60437 1756 aa22.66■■□□□ 1.22
PDCD6-202ENST00000505221 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
PDCD6-202ENST00000505221 C14orf93Q9H972 538 aaKnown RBP22.64■■□□□ 1.21
PDCD6-202ENST00000505221 TBX22Q9Y458 520 aa22.64■■□□□ 1.21
PDCD6-202ENST00000505221 MED14O60244 1454 aa22.63■■□□□ 1.21
PDCD6-202ENST00000505221 CFAP70Q5T0N1 1121 aa22.63■■□□□ 1.21
PDCD6-202ENST00000505221 NBPF8Q3BBV2 869 aa22.62■■□□□ 1.21
PDCD6-202ENST00000505221 PRAG1Q86YV5 1406 aa22.62■■□□□ 1.21
PDCD6-202ENST00000505221 IFT172Q9UG01 1749 aa22.62■■□□□ 1.21
PDCD6-202ENST00000505221 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
PDCD6-202ENST00000505221 PIK3C2GO75747 1445 aa22.61■■□□□ 1.21
PDCD6-202ENST00000505221 POLR1AO95602 1720 aaPredicted RBP22.57■■□□□ 1.2
PDCD6-202ENST00000505221 SETBP1Q9Y6X0 1596 aa22.56■■□□□ 1.2
PDCD6-202ENST00000505221 TMEM132EQ6IEE7 984 aa22.55■■□□□ 1.2
PDCD6-202ENST00000505221 ADAMTS13Q76LX8 1427 aa22.55■■□□□ 1.2
PDCD6-202ENST00000505221 ROCK2O75116 1388 aaKnown RBP22.54■■□□□ 1.2
PDCD6-202ENST00000505221 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
PDCD6-202ENST00000505221 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
PDCD6-202ENST00000505221 ALKQ9UM73 1620 aa22.53■■□□□ 1.2
PDCD6-202ENST00000505221 STRCQ7RTU9 1775 aa22.53■■□□□ 1.2
PDCD6-202ENST00000505221 CARD11Q9BXL7 1154 aa22.52■■□□□ 1.2
PDCD6-202ENST00000505221 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
PDCD6-202ENST00000505221 STK26Q9P289 416 aa22.51■■□□□ 1.19
PDCD6-202ENST00000505221 METP08581 1390 aa22.5■■□□□ 1.19
PDCD6-202ENST00000505221 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
PDCD6-202ENST00000505221 KCNA6P17658 529 aa22.49■■□□□ 1.19
PDCD6-202ENST00000505221 AMOTL2Q9Y2J4 779 aa22.49■■□□□ 1.19
PDCD6-202ENST00000505221 LAMC1P11047 1609 aa22.48■■□□□ 1.19
PDCD6-202ENST00000505221 NRXN3Q9Y4C0 1643 aa22.47■■□□□ 1.19
PDCD6-202ENST00000505221 RALGAPBQ86X10 1494 aa22.47■■□□□ 1.19
PDCD6-202ENST00000505221 TRAK1Q9UPV9 953 aa22.46■■□□□ 1.19
PDCD6-202ENST00000505221 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.19
PDCD6-202ENST00000505221 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
PDCD6-202ENST00000505221 YTHDC2Q9H6S0 1430 aaKnown RBP22.44■■□□□ 1.18
PDCD6-202ENST00000505221 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
PDCD6-202ENST00000505221 ABCC11Q96J66 1382 aa22.43■■□□□ 1.18
PDCD6-202ENST00000505221 GPRASP1Q5JY77 1395 aa22.42■■□□□ 1.18
PDCD6-202ENST00000505221 POGKQ9P215 609 aa22.42■■□□□ 1.18
PDCD6-202ENST00000505221 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
PDCD6-202ENST00000505221 SIRT1Q96EB6 747 aa22.4■■□□□ 1.18
PDCD6-202ENST00000505221 ZNF335Q9H4Z2 1342 aaPredicted RBP22.39■■□□□ 1.18
PDCD6-202ENST00000505221 ADGRB1O14514 1584 aa22.39■■□□□ 1.18
PDCD6-202ENST00000505221 PTPRUQ92729 1446 aa22.39■■□□□ 1.17
PDCD6-202ENST00000505221 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
PDCD6-202ENST00000505221 EIF4G2P78344 907 aaKnown RBP eCLIP22.38■■□□□ 1.172e-7■■■■■ 43.7
PDCD6-202ENST00000505221 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
PDCD6-202ENST00000505221 PRAM1Q96QH2 718 aa22.36■■□□□ 1.17
PDCD6-202ENST00000505221 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
PDCD6-202ENST00000505221 WAPLQ7Z5K2 1190 aa22.34■■□□□ 1.17
PDCD6-202ENST00000505221 C14orf37Q86TY3 774 aa22.34■■□□□ 1.17
PDCD6-202ENST00000505221 TECPR2O15040 1411 aa22.33■■□□□ 1.17
PDCD6-202ENST00000505221 USP47Q96K76 1375 aa22.33■■□□□ 1.17
PDCD6-202ENST00000505221 CENPJQ9HC77 1338 aaPredicted RBP22.32■■□□□ 1.16
PDCD6-202ENST00000505221 FAM135BQ49AJ0 1406 aa22.32■■□□□ 1.16
PDCD6-202ENST00000505221 CHD2O14647 1828 aaKnown RBP22.32■■□□□ 1.16
PDCD6-202ENST00000505221 SLC24A1O60721 1099 aa22.32■■□□□ 1.16
PDCD6-202ENST00000505221 SAFB2Q14151 953 aaKnown RBP eCLIP22.32■■□□□ 1.163e-8■■□□□ 13.6
PDCD6-202ENST00000505221 ROBO2Q9HCK4 1378 aa22.32■■□□□ 1.16
PDCD6-202ENST00000505221 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
PDCD6-202ENST00000505221 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
PDCD6-202ENST00000505221 NKTRP30414 1462 aaKnown RBP22.3■■□□□ 1.16
PDCD6-202ENST00000505221 ST20-MTHFSA0A0A6YYL1 179 aa22.3■■□□□ 1.16
PDCD6-202ENST00000505221 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
PDCD6-202ENST00000505221 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
PDCD6-202ENST00000505221 NWD1Q149M9 1564 aa22.29■■□□□ 1.16
PDCD6-202ENST00000505221 CPS1P31327 1500 aa22.28■■□□□ 1.16
PDCD6-202ENST00000505221 XRN1Q8IZH2 1706 aaKnown RBP22.27■■□□□ 1.16
PDCD6-202ENST00000505221 TMEM94Q12767 1356 aa22.25■■□□□ 1.15
PDCD6-202ENST00000505221 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
PDCD6-202ENST00000505221 NCOA3Q9Y6Q9 1424 aa22.25■■□□□ 1.15
PDCD6-202ENST00000505221 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
PDCD6-202ENST00000505221 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
PDCD6-202ENST00000505221 C19orf44Q9H6X5 657 aa22.24■■□□□ 1.15
PDCD6-202ENST00000505221 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms