RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 KCNC4Q03721 635 aa9.82□□□□□ -0.84
GYPA-204ENST00000504786 METTL3Q86U44 580 aaKnown RBP9.81□□□□□ -0.84
GYPA-204ENST00000504786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
GYPA-204ENST00000504786 APLP1P51693 650 aa9.79□□□□□ -0.84
GYPA-204ENST00000504786 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
GYPA-204ENST00000504786 A0A0G2JS52 829 aa9.76□□□□□ -0.85
GYPA-204ENST00000504786 TJAP1Q5JTD0 557 aa9.76□□□□□ -0.85
GYPA-204ENST00000504786 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
GYPA-204ENST00000504786 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
GYPA-204ENST00000504786 MTRQ99707 1265 aa9.75□□□□□ -0.85
GYPA-204ENST00000504786 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
GYPA-204ENST00000504786 MAP2K5Q13163 448 aa9.74□□□□□ -0.85
GYPA-204ENST00000504786 KMT5BQ4FZB7 885 aa9.74□□□□□ -0.85
GYPA-204ENST00000504786 DAXXQ9UER7 740 aaPredicted RBP9.73□□□□□ -0.85
GYPA-204ENST00000504786 IRF6O14896 467 aa9.72□□□□□ -0.85
GYPA-204ENST00000504786 SLC10A3P09131 477 aa9.72□□□□□ -0.85
GYPA-204ENST00000504786 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
GYPA-204ENST00000504786 CFHP08603 1231 aa9.71□□□□□ -0.86
GYPA-204ENST00000504786 NLRP7Q8WX94 980 aa9.71□□□□□ -0.86
GYPA-204ENST00000504786 BCANQ96GW7 911 aa9.71□□□□□ -0.86
GYPA-204ENST00000504786 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
GYPA-204ENST00000504786 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
GYPA-204ENST00000504786 RGS20O76081 388 aa9.7□□□□□ -0.86
GYPA-204ENST00000504786 COPS2P61201 443 aa9.7□□□□□ -0.86
GYPA-204ENST00000504786 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
GYPA-204ENST00000504786 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
GYPA-204ENST00000504786 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
GYPA-204ENST00000504786 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
GYPA-204ENST00000504786 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
GYPA-204ENST00000504786 KRI1Q8N9T8 703 aaKnown RBP9.67□□□□□ -0.86
GYPA-204ENST00000504786 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
GYPA-204ENST00000504786 ZPR1O75312 459 aa9.65□□□□□ -0.86
GYPA-204ENST00000504786 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
GYPA-204ENST00000504786 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
GYPA-204ENST00000504786 ZMYND10O75800 440 aa9.63□□□□□ -0.87
GYPA-204ENST00000504786 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
GYPA-204ENST00000504786 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
GYPA-204ENST00000504786 NR1I2O75469 434 aa9.62□□□□□ -0.87
GYPA-204ENST00000504786 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
GYPA-204ENST00000504786 GCGRP47871 477 aa9.61□□□□□ -0.87
GYPA-204ENST00000504786 PPP1R18Q6NYC8 613 aa9.61□□□□□ -0.87
GYPA-204ENST00000504786 GGCXP38435 758 aa9.6□□□□□ -0.87
GYPA-204ENST00000504786 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.6□□□□□ -0.87
GYPA-204ENST00000504786 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
GYPA-204ENST00000504786 CLCN1P35523 988 aa9.58□□□□□ -0.88
GYPA-204ENST00000504786 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
GYPA-204ENST00000504786 CD46P15529 392 aa9.57□□□□□ -0.88
GYPA-204ENST00000504786 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
GYPA-204ENST00000504786 FUT2Q10981 343 aa9.57□□□□□ -0.88
GYPA-204ENST00000504786 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
GYPA-204ENST00000504786 TMUB1Q9BVT8 246 aa9.56□□□□□ -0.88
GYPA-204ENST00000504786 TLL1O43897 1013 aa9.55□□□□□ -0.88
GYPA-204ENST00000504786 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
GYPA-204ENST00000504786 GRIPAP1Q4V328 841 aa9.55□□□□□ -0.88
GYPA-204ENST00000504786 MORN1Q5T089 497 aa9.55□□□□□ -0.88
GYPA-204ENST00000504786 ADH1BP00325 375 aa9.54□□□□□ -0.88
GYPA-204ENST00000504786 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
GYPA-204ENST00000504786 SPSB2Q99619 263 aa9.52□□□□□ -0.89
GYPA-204ENST00000504786 KDM4AO75164 1064 aa9.51□□□□□ -0.89
GYPA-204ENST00000504786 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
GYPA-204ENST00000504786 SLC27A5Q9Y2P5 690 aa9.51□□□□□ -0.89
GYPA-204ENST00000504786 S1PR4O95977 384 aa9.5□□□□□ -0.89
GYPA-204ENST00000504786 TTLL12Q14166 644 aaPredicted RBP9.5□□□□□ -0.89
GYPA-204ENST00000504786 AMHR2Q16671 573 aa9.5□□□□□ -0.89
GYPA-204ENST00000504786 AK7Q96M32 723 aa9.5□□□□□ -0.89
GYPA-204ENST00000504786 IRX2Q9BZI1 471 aaPredicted RBP9.5□□□□□ -0.89
GYPA-204ENST00000504786 SLC6A16Q9GZN6 736 aa9.5□□□□□ -0.89
GYPA-204ENST00000504786 RNF223E7ERA6 249 aa9.49□□□□□ -0.89
GYPA-204ENST00000504786 FMNL1O95466 1100 aaPredicted RBP9.49□□□□□ -0.89
GYPA-204ENST00000504786 USP46P62068 366 aa9.49□□□□□ -0.89
GYPA-204ENST00000504786 REPIN1Q9BWE0 567 aaKnown RBP9.49□□□□□ -0.89
GYPA-204ENST00000504786 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
GYPA-204ENST00000504786 SSTR3P32745 418 aaPredicted RBP9.48□□□□□ -0.89
GYPA-204ENST00000504786 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
GYPA-204ENST00000504786 TRIM66O15016 1216 aa9.47□□□□□ -0.89
GYPA-204ENST00000504786 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
GYPA-204ENST00000504786 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
GYPA-204ENST00000504786 THAP11Q96EK4 314 aa9.47□□□□□ -0.89
GYPA-204ENST00000504786 Q3C1V9 767 aa9.46□□□□□ -0.9
GYPA-204ENST00000504786 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
GYPA-204ENST00000504786 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
GYPA-204ENST00000504786 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
GYPA-204ENST00000504786 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
GYPA-204ENST00000504786 HOXA2O43364 376 aa9.43□□□□□ -0.9
GYPA-204ENST00000504786 SLC19A1P41440 591 aa9.43□□□□□ -0.9
GYPA-204ENST00000504786 SLC24A3Q9HC58 644 aa9.43□□□□□ -0.9
GYPA-204ENST00000504786 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
GYPA-204ENST00000504786 FAM160A2Q8N612 972 aaPredicted RBP9.42□□□□□ -0.9
GYPA-204ENST00000504786 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
GYPA-204ENST00000504786 HLA-CQ95604 372 aa9.41□□□□□ -0.9
GYPA-204ENST00000504786 MSS51Q4VC12 460 aa9.4□□□□□ -0.9
GYPA-204ENST00000504786 PDE4DQ08499 809 aa9.39□□□□□ -0.91
GYPA-204ENST00000504786 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
GYPA-204ENST00000504786 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
GYPA-204ENST00000504786 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
GYPA-204ENST00000504786 GFRA3O60609 400 aa9.38□□□□□ -0.91
GYPA-204ENST00000504786 GUCA2AQ02747 115 aa9.38□□□□□ -0.91
GYPA-204ENST00000504786 LAPTM4AQ15012 233 aa9.38□□□□□ -0.91
GYPA-204ENST00000504786 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
GYPA-204ENST00000504786 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms