RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 ZNF608Q9ULD9 1512 aaPredicted RBP9.67□□□□□ -0.86
CSNK1A1-204ENST00000504676 SYNJ2O15056 1496 aa9.67□□□□□ -0.86
CSNK1A1-204ENST00000504676 ITSN2Q9NZM3 1697 aa9.67□□□□□ -0.86
CSNK1A1-204ENST00000504676 TRIM66O15016 1216 aa9.66□□□□□ -0.86
CSNK1A1-204ENST00000504676 HIRIP3Q9BW71 556 aaPredicted RBP9.66□□□□□ -0.86
CSNK1A1-204ENST00000504676 KDM6BO15054 1643 aa9.66□□□□□ -0.86
CSNK1A1-204ENST00000504676 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
CSNK1A1-204ENST00000504676 CCDC7Q96M83 1385 aa9.66□□□□□ -0.86
CSNK1A1-204ENST00000504676 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
CSNK1A1-204ENST00000504676 PLEKHG3A1L390 1219 aa9.65□□□□□ -0.86
CSNK1A1-204ENST00000504676 MNX1P50219 401 aaPredicted RBP9.65□□□□□ -0.86
CSNK1A1-204ENST00000504676 SERPINA10Q9UK55 444 aa9.65□□□□□ -0.86
CSNK1A1-204ENST00000504676 NUP160Q12769 1436 aa9.65□□□□□ -0.87
CSNK1A1-204ENST00000504676 GPATCH8Q9UKJ3 1502 aaKnown RBP9.64□□□□□ -0.87
CSNK1A1-204ENST00000504676 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
CSNK1A1-204ENST00000504676 CFDP1Q9UEE9 299 aaPredicted RBP9.64□□□□□ -0.87
CSNK1A1-204ENST00000504676 ANKRD30AQ9BXX3 1397 aa9.64□□□□□ -0.87
CSNK1A1-204ENST00000504676 SHANK2Q9UPX8 1470 aa9.64□□□□□ -0.87
CSNK1A1-204ENST00000504676 EIF4G3O43432 1585 aaKnown RBP9.64□□□□□ -0.87
CSNK1A1-204ENST00000504676 ADGBQ8N7X0 1667 aa9.63□□□□□ -0.87
CSNK1A1-204ENST00000504676 KIAA1107Q9UPP5 1409 aa9.63□□□□□ -0.87
CSNK1A1-204ENST00000504676 VGFO15240 615 aaPredicted RBP9.63□□□□□ -0.87
CSNK1A1-204ENST00000504676 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
CSNK1A1-204ENST00000504676 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
CSNK1A1-204ENST00000504676 CAMSAP2Q08AD1 1489 aa9.62□□□□□ -0.87
CSNK1A1-204ENST00000504676 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
CSNK1A1-204ENST00000504676 BCL11BQ9C0K0 894 aaPredicted RBP9.62□□□□□ -0.87
CSNK1A1-204ENST00000504676 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
CSNK1A1-204ENST00000504676 PZPP20742 1482 aa9.62□□□□□ -0.87
CSNK1A1-204ENST00000504676 MBD5Q9P267 1494 aa9.61□□□□□ -0.87
CSNK1A1-204ENST00000504676 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
CSNK1A1-204ENST00000504676 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
CSNK1A1-204ENST00000504676 POLR1AO95602 1720 aaPredicted RBP9.61□□□□□ -0.87
CSNK1A1-204ENST00000504676 UHRF1BP1Q6BDS2 1440 aa9.61□□□□□ -0.87
CSNK1A1-204ENST00000504676 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 JPH4Q96JJ6 628 aa9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 CWC22Q9HCG8 908 aaKnown RBP9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 PRG4Q92954 1404 aaPredicted RBP9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 ROCK2O75116 1388 aaKnown RBP9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 GABBR2O75899 941 aa9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 HNRNPUQ00839 825 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 NBPF8Q3BBV2 869 aa9.6□□□□□ -0.87
CSNK1A1-204ENST00000504676 CEP170Q5SW79 1584 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 KDM5DQ9BY66 1539 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 CROCC2H7BZ55 1655 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 E2F4Q16254 413 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 ZRANB1Q9UGI0 708 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 ABCA8O94911 1581 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 ZBED9Q6R2W3 1325 aa9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 ZNF644Q9H582 1327 aaPredicted RBP9.59□□□□□ -0.87
CSNK1A1-204ENST00000504676 ARHGEF12Q9NZN5 1544 aa9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 PDE4CQ08493 712 aa9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 TAF7LQ5H9L4 462 aa9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 ZBTB47Q9UFB7 747 aaPredicted RBP9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
CSNK1A1-204ENST00000504676 ABCC10Q5T3U5 1492 aa9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 KIF7Q2M1P5 1343 aa9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 PLB1Q6P1J6 1458 aa9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 GSE1Q14687 1217 aa9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 ARHGEF5Q12774 1597 aa9.57□□□□□ -0.88
CSNK1A1-204ENST00000504676 ERCC6Q03468 1493 aa9.56□□□□□ -0.88
CSNK1A1-204ENST00000504676 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
CSNK1A1-204ENST00000504676 KIF14Q15058 1648 aa9.56□□□□□ -0.88
CSNK1A1-204ENST00000504676 PTPRGP23470 1445 aa9.56□□□□□ -0.88
CSNK1A1-204ENST00000504676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 ATP10BO94823 1461 aa9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 MCM6Q14566 821 aa9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 ANP32EQ9BTT0 268 aa9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 PPP4R2Q9NY27 417 aa9.55□□□□□ -0.88
CSNK1A1-204ENST00000504676 RALGAPBQ86X10 1494 aa9.54□□□□□ -0.88
CSNK1A1-204ENST00000504676 MRS2Q9HD23 443 aa9.54□□□□□ -0.88
CSNK1A1-204ENST00000504676 C9orf84Q5VXU9 1444 aa9.54□□□□□ -0.88
CSNK1A1-204ENST00000504676 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
CSNK1A1-204ENST00000504676 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
CSNK1A1-204ENST00000504676 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
CSNK1A1-204ENST00000504676 IGSF5Q9NSI5 407 aa9.53□□□□□ -0.88
CSNK1A1-204ENST00000504676 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
CSNK1A1-204ENST00000504676 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
CSNK1A1-204ENST00000504676 UNCXA6NJT0 531 aa9.52□□□□□ -0.88
CSNK1A1-204ENST00000504676 USP47Q96K76 1375 aa9.52□□□□□ -0.88
CSNK1A1-204ENST00000504676 DHX29Q7Z478 1369 aaKnown RBP9.52□□□□□ -0.89
CSNK1A1-204ENST00000504676 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
CSNK1A1-204ENST00000504676 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
CSNK1A1-204ENST00000504676 NUP155O75694 1391 aa9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 FANCIQ9NVI1 1328 aa9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 CLCN6P51797 869 aa9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 CDC42BPAQ5VT25 1732 aa9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 KDM5CP41229 1560 aa9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 SMG6Q86US8 1419 aaKnown RBP9.51□□□□□ -0.89
CSNK1A1-204ENST00000504676 CERS3Q8IU89 383 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms