RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 PPP1R18Q6NYC8 613 aa10.37□□□□□ -0.75
HMGCR-204ENST00000504466 HIC1Q14526 733 aa10.36□□□□□ -0.75
HMGCR-204ENST00000504466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
HMGCR-204ENST00000504466 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
HMGCR-204ENST00000504466 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
HMGCR-204ENST00000504466 PXYLP1Q8TE99 480 aa10.35□□□□□ -0.75
HMGCR-204ENST00000504466 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
HMGCR-204ENST00000504466 ZPR1O75312 459 aa10.34□□□□□ -0.75
HMGCR-204ENST00000504466 OATP04181 439 aa10.34□□□□□ -0.75
HMGCR-204ENST00000504466 NKX2-3Q8TAU0 364 aa10.34□□□□□ -0.75
HMGCR-204ENST00000504466 GPR37O15354 613 aa10.33□□□□□ -0.76
HMGCR-204ENST00000504466 COPS2P61201 443 aa10.33□□□□□ -0.76
HMGCR-204ENST00000504466 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
HMGCR-204ENST00000504466 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
HMGCR-204ENST00000504466 ACTN4O43707 911 aaKnown RBP10.32□□□□□ -0.76
HMGCR-204ENST00000504466 PCDHB3Q9Y5E6 796 aa10.32□□□□□ -0.76
HMGCR-204ENST00000504466 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
HMGCR-204ENST00000504466 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
HMGCR-204ENST00000504466 SLC10A3P09131 477 aa10.3□□□□□ -0.76
HMGCR-204ENST00000504466 LAPTM4AQ15012 233 aa10.3□□□□□ -0.76
HMGCR-204ENST00000504466 METTL3Q86U44 580 aaKnown RBP10.3□□□□□ -0.76
HMGCR-204ENST00000504466 GNPATO15228 680 aa10.29□□□□□ -0.76
HMGCR-204ENST00000504466 BLOC1S3Q6QNY0 202 aa10.29□□□□□ -0.76
HMGCR-204ENST00000504466 GGCXP38435 758 aa10.28□□□□□ -0.76
HMGCR-204ENST00000504466 KMT5BQ4FZB7 885 aa10.28□□□□□ -0.76
HMGCR-204ENST00000504466 FECHP22830 423 aa10.27□□□□□ -0.77
HMGCR-204ENST00000504466 CFHP08603 1231 aa10.26□□□□□ -0.77
HMGCR-204ENST00000504466 Q6ZNB5 142 aa10.23□□□□□ -0.77
HMGCR-204ENST00000504466 GFRA3O60609 400 aa10.22□□□□□ -0.77
HMGCR-204ENST00000504466 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
HMGCR-204ENST00000504466 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
HMGCR-204ENST00000504466 NRG2O14511 850 aaPredicted RBP10.21□□□□□ -0.77
HMGCR-204ENST00000504466 LCE2BO14633 110 aa10.2□□□□□ -0.78
HMGCR-204ENST00000504466 TLL1O43897 1013 aa10.2□□□□□ -0.78
HMGCR-204ENST00000504466 RSPH4AQ5TD94 716 aa10.2□□□□□ -0.78
HMGCR-204ENST00000504466 NR1I2O75469 434 aa10.19□□□□□ -0.78
HMGCR-204ENST00000504466 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
HMGCR-204ENST00000504466 ANKLE1Q8NAG6 615 aa10.18□□□□□ -0.78
HMGCR-204ENST00000504466 PHOX2BQ99453 314 aa10.18□□□□□ -0.78
HMGCR-204ENST00000504466 ADH1BP00325 375 aa10.17□□□□□ -0.78
HMGCR-204ENST00000504466 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
HMGCR-204ENST00000504466 SCUBE3Q8IX30 993 aa10.17□□□□□ -0.78
HMGCR-204ENST00000504466 S1PR4O95977 384 aa10.15□□□□□ -0.78
HMGCR-204ENST00000504466 SLC19A1P41440 591 aa10.14□□□□□ -0.79
HMGCR-204ENST00000504466 TRAF7Q6Q0C0 670 aa10.14□□□□□ -0.79
HMGCR-204ENST00000504466 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
HMGCR-204ENST00000504466 CCDC180Q9P1Z9 1646 aa10.12□□□□□ -0.79
HMGCR-204ENST00000504466 GCGRP47871 477 aa10.12□□□□□ -0.79
HMGCR-204ENST00000504466 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
HMGCR-204ENST00000504466 MORN1Q5T089 497 aa10.12□□□□□ -0.79
HMGCR-204ENST00000504466 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
HMGCR-204ENST00000504466 SULF1Q8IWU6 871 aa10.12□□□□□ -0.79
HMGCR-204ENST00000504466 SPRYD7Q5W111 196 aa10.11□□□□□ -0.79
HMGCR-204ENST00000504466 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
HMGCR-204ENST00000504466 SLC6A16Q9GZN6 736 aa10.11□□□□□ -0.79
HMGCR-204ENST00000504466 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
HMGCR-204ENST00000504466 PPEF1O14829 653 aaPredicted RBP10.1□□□□□ -0.79
HMGCR-204ENST00000504466 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
HMGCR-204ENST00000504466 ZNF598Q86UK7 904 aaKnown RBP10.1□□□□□ -0.79
HMGCR-204ENST00000504466 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
HMGCR-204ENST00000504466 THAP11Q96EK4 314 aa10.1□□□□□ -0.79
HMGCR-204ENST00000504466 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
HMGCR-204ENST00000504466 FUT2Q10981 343 aa10.09□□□□□ -0.79
HMGCR-204ENST00000504466 MAP2K5Q13163 448 aa10.09□□□□□ -0.79
HMGCR-204ENST00000504466 SPSB2Q99619 263 aa10.09□□□□□ -0.79
HMGCR-204ENST00000504466 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-204ENST00000504466 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
HMGCR-204ENST00000504466 PRR20EP86478 221 aa10.08□□□□□ -0.8
HMGCR-204ENST00000504466 PRR20CP86479 221 aa10.08□□□□□ -0.8
HMGCR-204ENST00000504466 PRR20DP86480 221 aa10.08□□□□□ -0.8
HMGCR-204ENST00000504466 PRR20BP86481 221 aa10.08□□□□□ -0.8
HMGCR-204ENST00000504466 PRR20AP86496 221 aa10.08□□□□□ -0.8
HMGCR-204ENST00000504466 IRF6O14896 467 aa10.06□□□□□ -0.8
HMGCR-204ENST00000504466 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
HMGCR-204ENST00000504466 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
HMGCR-204ENST00000504466 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
HMGCR-204ENST00000504466 SLC27A5Q9Y2P5 690 aa10.05□□□□□ -0.8
HMGCR-204ENST00000504466 MINK1Q8N4C8 1332 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-204ENST00000504466 GDF9O60383 454 aa10.03□□□□□ -0.8
HMGCR-204ENST00000504466 CD46P15529 392 aa10.03□□□□□ -0.8
HMGCR-204ENST00000504466 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
HMGCR-204ENST00000504466 FAM160A2Q8N612 972 aaPredicted RBP10.03□□□□□ -0.8
HMGCR-204ENST00000504466 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
HMGCR-204ENST00000504466 ZNF697Q5TEC3 545 aa10.02□□□□□ -0.81
HMGCR-204ENST00000504466 GRIPAP1Q4V328 841 aa10□□□□□ -0.81
HMGCR-204ENST00000504466 DGAT1O75907 488 aa9.99□□□□□ -0.81
HMGCR-204ENST00000504466 RPIAP49247 311 aa9.99□□□□□ -0.81
HMGCR-204ENST00000504466 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
HMGCR-204ENST00000504466 LMOD2Q6P5Q4 547 aa9.98□□□□□ -0.81
HMGCR-204ENST00000504466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.98□□□□□ -0.81
HMGCR-204ENST00000504466 RNF19BQ6ZMZ0 732 aa9.96□□□□□ -0.82
HMGCR-204ENST00000504466 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
HMGCR-204ENST00000504466 PKD2L1Q9P0L9 805 aa9.96□□□□□ -0.82
HMGCR-204ENST00000504466 FCF1Q9Y324 198 aaKnown RBP9.96□□□□□ -0.82
HMGCR-204ENST00000504466 KDM4AO75164 1064 aa9.95□□□□□ -0.82
HMGCR-204ENST00000504466 MDM2Q00987 491 aaPredicted RBP9.95□□□□□ -0.82
HMGCR-204ENST00000504466 Q3C1V9 767 aa9.95□□□□□ -0.82
HMGCR-204ENST00000504466 USP46P62068 366 aa9.94□□□□□ -0.82
HMGCR-204ENST00000504466 MYT1Q01538 1121 aa9.94□□□□□ -0.82
HMGCR-204ENST00000504466 PKDCCQ504Y2 493 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 846.3 ms