RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 PER1O15534 1290 aaPredicted RBP24.46■■□□□ 1.51
SDHA-204ENST00000504309 MYOM1P52179 1685 aa24.45■■□□□ 1.5
SDHA-204ENST00000504309 RAPGEF3O95398 923 aa24.45■■□□□ 1.5
SDHA-204ENST00000504309 BRD4O60885 1362 aaPredicted RBP24.45■■□□□ 1.5
SDHA-204ENST00000504309 GLI2P10070 1586 aa24.44■■□□□ 1.5
SDHA-204ENST00000504309 PNISRQ8TF01 805 aaKnown RBP24.44■■□□□ 1.5
SDHA-204ENST00000504309 TMC1Q8TDI8 760 aa24.44■■□□□ 1.5
SDHA-204ENST00000504309 GGT6Q6P531 493 aa24.42■■□□□ 1.5
SDHA-204ENST00000504309 NRXN1Q9ULB1 1477 aa24.42■■□□□ 1.5
SDHA-204ENST00000504309 SYNMO15061 1565 aa24.41■■□□□ 1.5
SDHA-204ENST00000504309 LRPPRCP42704 1394 aaKnown RBP24.41■■□□□ 1.5
SDHA-204ENST00000504309 KDM5AP29375 1690 aaKnown RBP24.4■■□□□ 1.5
SDHA-204ENST00000504309 ZC3H13Q5T200 1668 aaKnown RBP24.4■■□□□ 1.5
SDHA-204ENST00000504309 ADGRF5Q8IZF2 1346 aa24.4■■□□□ 1.5
SDHA-204ENST00000504309 CYB5RLQ6IPT4 315 aa24.39■■□□□ 1.49
SDHA-204ENST00000504309 PANK3Q9H999 370 aa24.39■■□□□ 1.49
SDHA-204ENST00000504309 PIK3C2BO00750 1634 aa24.38■■□□□ 1.49
SDHA-204ENST00000504309 EIF3AQ14152 1382 aaKnown RBP24.37■■□□□ 1.49
SDHA-204ENST00000504309 MYO3AQ8NEV4 1616 aa24.37■■□□□ 1.49
SDHA-204ENST00000504309 DIP2BQ9P265 1576 aa24.37■■□□□ 1.49
SDHA-204ENST00000504309 TSPOAP1O95153 1857 aa24.36■■□□□ 1.49
SDHA-204ENST00000504309 NOS1P29475 1434 aa24.36■■□□□ 1.49
SDHA-204ENST00000504309 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
SDHA-204ENST00000504309 CFAP70Q5T0N1 1121 aa24.35■■□□□ 1.49
SDHA-204ENST00000504309 YEATS2Q9ULM3 1422 aa24.35■■□□□ 1.49
SDHA-204ENST00000504309 NLRP13Q86W25 1043 aa24.34■■□□□ 1.49
SDHA-204ENST00000504309 IRX6P78412 446 aaPredicted RBP24.34■■□□□ 1.49
SDHA-204ENST00000504309 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.49
SDHA-204ENST00000504309 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.48
SDHA-204ENST00000504309 SMG6Q86US8 1419 aaKnown RBP24.32■■□□□ 1.48
SDHA-204ENST00000504309 ZMYM4Q5VZL5 1548 aa24.3■■□□□ 1.48
SDHA-204ENST00000504309 CHGAP10645 457 aaKnown RBP24.29■■□□□ 1.48
SDHA-204ENST00000504309 PIK3C2GO75747 1445 aa24.29■■□□□ 1.48
SDHA-204ENST00000504309 MYO5BQ9ULV0 1848 aa24.28■■□□□ 1.48
SDHA-204ENST00000504309 SENP3-EIF4A1A0A087X0R7 540 aa24.28■■□□□ 1.48
SDHA-204ENST00000504309 ERVK-7P63135 1459 aa24.28■■□□□ 1.48
SDHA-204ENST00000504309 CDCA8Q53HL2 280 aa24.27■■□□□ 1.48
SDHA-204ENST00000504309 QRICH2Q9H0J4 1663 aa24.26■■□□□ 1.47
SDHA-204ENST00000504309 PREX1Q8TCU6 1659 aa24.26■■□□□ 1.47
SDHA-204ENST00000504309 TSHZ2Q9NRE2 1034 aa24.25■■□□□ 1.47
SDHA-204ENST00000504309 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
SDHA-204ENST00000504309 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
SDHA-204ENST00000504309 NEXMIFQ5QGS0 1516 aa24.24■■□□□ 1.47
SDHA-204ENST00000504309 NUDCQ9Y266 331 aa24.23■■□□□ 1.47
SDHA-204ENST00000504309 ASXL1Q8IXJ9 1541 aa24.23■■□□□ 1.47
SDHA-204ENST00000504309 FAM69CQ0P6D2 419 aa24.2■■□□□ 1.47
SDHA-204ENST00000504309 SBNO2Q9Y2G9 1366 aa24.19■■□□□ 1.46
SDHA-204ENST00000504309 KNSTRNQ9Y448 316 aa24.19■■□□□ 1.46
SDHA-204ENST00000504309 AMER1Q5JTC6 1135 aaPredicted RBP24.19■■□□□ 1.46
SDHA-204ENST00000504309 ERICH6BQ5W0A0 696 aa24.19■■□□□ 1.46
SDHA-204ENST00000504309 ARHGEF28Q8N1W1 1705 aaKnown RBP24.18■■□□□ 1.46
SDHA-204ENST00000504309 RPGRIP1LQ68CZ1 1315 aa24.17■■□□□ 1.46
SDHA-204ENST00000504309 BLMP54132 1417 aaPredicted RBP24.17■■□□□ 1.46
SDHA-204ENST00000504309 C14orf93Q9H972 538 aaKnown RBP24.16■■□□□ 1.46
SDHA-204ENST00000504309 KIF13AQ9H1H9 1805 aa24.15■■□□□ 1.46
SDHA-204ENST00000504309 TMEM131LA2VDJ0 1609 aa24.15■■□□□ 1.46
SDHA-204ENST00000504309 REREQ9P2R6 1566 aa24.14■■□□□ 1.45
SDHA-204ENST00000504309 SLC24A1O60721 1099 aa24.13■■□□□ 1.45
SDHA-204ENST00000504309 INSRP06213 1382 aa24.13■■□□□ 1.45
SDHA-204ENST00000504309 CENPJQ9HC77 1338 aaPredicted RBP24.13■■□□□ 1.45
SDHA-204ENST00000504309 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
SDHA-204ENST00000504309 PPP2R1AP30153 589 aa24.11■■□□□ 1.45
SDHA-204ENST00000504309 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
SDHA-204ENST00000504309 RNF123Q5XPI4 1314 aa24.1■■□□□ 1.45
SDHA-204ENST00000504309 PPP4R2Q9NY27 417 aa24.1■■□□□ 1.45
SDHA-204ENST00000504309 NUTM2DQ5VT03 806 aaPredicted RBP24.09■■□□□ 1.45
SDHA-204ENST00000504309 TMEM132EQ6IEE7 984 aa24.09■■□□□ 1.45
SDHA-204ENST00000504309 CLTCQ00610 1675 aaKnown RBP24.09■■□□□ 1.45
SDHA-204ENST00000504309 IDI1Q13907 227 aa24.09■■□□□ 1.45
SDHA-204ENST00000504309 SALL2Q9Y467 1007 aaPredicted RBP24.07■■□□□ 1.44
SDHA-204ENST00000504309 AGLP35573 1532 aa24.06■■□□□ 1.44
SDHA-204ENST00000504309 VGFO15240 615 aaPredicted RBP24.04■■□□□ 1.44
SDHA-204ENST00000504309 SLC52A1Q9NWF4 448 aa24.04■■□□□ 1.44
SDHA-204ENST00000504309 ZFYVE9O95405 1425 aa24.04■■□□□ 1.44
SDHA-204ENST00000504309 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
SDHA-204ENST00000504309 TULP4Q9NRJ4 1543 aa24.02■■□□□ 1.44
SDHA-204ENST00000504309 ARHGEF40Q8TER5 1519 aa24.01■■□□□ 1.43
SDHA-204ENST00000504309 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
SDHA-204ENST00000504309 USP32Q8NFA0 1604 aa23.99■■□□□ 1.43
SDHA-204ENST00000504309 PDE3BQ13370 1112 aa23.99■■□□□ 1.43
SDHA-204ENST00000504309 FBXO31Q5XUX0 539 aaPredicted RBP23.98■■□□□ 1.43
SDHA-204ENST00000504309 B4GALNT3Q6L9W6 998 aa23.98■■□□□ 1.43
SDHA-204ENST00000504309 NSD3Q9BZ95 1437 aa23.96■■□□□ 1.43
SDHA-204ENST00000504309 CDCA7LQ96GN5 454 aa23.96■■□□□ 1.43
SDHA-204ENST00000504309 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
SDHA-204ENST00000504309 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.42
SDHA-204ENST00000504309 SLC12A5Q9H2X9 1139 aa23.92■■□□□ 1.42
SDHA-204ENST00000504309 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
SDHA-204ENST00000504309 PTPRMP28827 1452 aa23.91■■□□□ 1.42
SDHA-204ENST00000504309 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
SDHA-204ENST00000504309 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
SDHA-204ENST00000504309 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
SDHA-204ENST00000504309 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.42
SDHA-204ENST00000504309 RRP1P56182 461 aaKnown RBP23.89■■□□□ 1.41
SDHA-204ENST00000504309 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.41
SDHA-204ENST00000504309 EVC2Q86UK5 1308 aa23.89■■□□□ 1.41
SDHA-204ENST00000504309 PPP6R1Q9UPN7 881 aa23.88■■□□□ 1.41
SDHA-204ENST00000504309 RBM19Q9Y4C8 960 aaKnown RBP23.87■■□□□ 1.41
SDHA-204ENST00000504309 YTHDC2Q9H6S0 1430 aaKnown RBP23.85■■□□□ 1.41
SDHA-204ENST00000504309 A2ML1A8K2U0 1454 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms