RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 NAIPQ13075 1403 aa15.46■□□□□ 0.07
COPS4-202ENST00000503682 CPS1P31327 1500 aa15.46■□□□□ 0.07
COPS4-202ENST00000503682 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.06
COPS4-202ENST00000503682 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
COPS4-202ENST00000503682 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
COPS4-202ENST00000503682 SPHKAPQ2M3C7 1700 aa15.42■□□□□ 0.06
COPS4-202ENST00000503682 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
COPS4-202ENST00000503682 PIP4K2BP78356 416 aa15.42■□□□□ 0.06
COPS4-202ENST00000503682 BCANQ96GW7 911 aa15.42■□□□□ 0.06
COPS4-202ENST00000503682 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
COPS4-202ENST00000503682 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
COPS4-202ENST00000503682 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
COPS4-202ENST00000503682 ZFYVE9O95405 1425 aa15.4■□□□□ 0.06
COPS4-202ENST00000503682 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
COPS4-202ENST00000503682 ALKQ9UM73 1620 aa15.39■□□□□ 0.05
COPS4-202ENST00000503682 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
COPS4-202ENST00000503682 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
COPS4-202ENST00000503682 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
COPS4-202ENST00000503682 TOM1O60784 492 aa15.36■□□□□ 0.05
COPS4-202ENST00000503682 CLTCL1P53675 1640 aa15.36■□□□□ 0.05
COPS4-202ENST00000503682 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
COPS4-202ENST00000503682 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
COPS4-202ENST00000503682 HSPA1LP34931 641 aa15.33■□□□□ 0.04
COPS4-202ENST00000503682 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.04
COPS4-202ENST00000503682 KCNA6P17658 529 aa15.32■□□□□ 0.04
COPS4-202ENST00000503682 KIF1BO60333 1816 aa15.32■□□□□ 0.04
COPS4-202ENST00000503682 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
COPS4-202ENST00000503682 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
COPS4-202ENST00000503682 TMEM94Q12767 1356 aa15.31■□□□□ 0.04
COPS4-202ENST00000503682 HDGFP51858 240 aaKnown RBP15.31■□□□□ 0.04
COPS4-202ENST00000503682 PROSER2Q86WR7 435 aaPredicted RBP15.31■□□□□ 0.04
COPS4-202ENST00000503682 TRPM2O94759 1503 aa15.3■□□□□ 0.04
COPS4-202ENST00000503682 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
COPS4-202ENST00000503682 ADAMTS13Q76LX8 1427 aa15.3■□□□□ 0.04
COPS4-202ENST00000503682 NWD1Q149M9 1564 aa15.29■□□□□ 0.04
COPS4-202ENST00000503682 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
COPS4-202ENST00000503682 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
COPS4-202ENST00000503682 NRXN3Q9Y4C0 1643 aa15.28■□□□□ 0.04
COPS4-202ENST00000503682 TBX22Q9Y458 520 aa15.26■□□□□ 0.03
COPS4-202ENST00000503682 NEXMIFQ5QGS0 1516 aa15.26■□□□□ 0.03
COPS4-202ENST00000503682 NKTRP30414 1462 aaKnown RBP15.24■□□□□ 0.03
COPS4-202ENST00000503682 PTPRUQ92729 1446 aa15.24■□□□□ 0.03
COPS4-202ENST00000503682 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
COPS4-202ENST00000503682 DIP2AQ14689 1571 aa15.22■□□□□ 0.03
COPS4-202ENST00000503682 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
COPS4-202ENST00000503682 AMOTL2Q9Y2J4 779 aa15.21■□□□□ 0.03
COPS4-202ENST00000503682 SETD5Q9C0A6 1442 aa15.21■□□□□ 0.03
COPS4-202ENST00000503682 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.03
COPS4-202ENST00000503682 ROBO1Q9Y6N7 1651 aa15.21■□□□□ 0.03
COPS4-202ENST00000503682 PPLO60437 1756 aa15.2■□□□□ 0.02
COPS4-202ENST00000503682 METP08581 1390 aa15.19■□□□□ 0.02
COPS4-202ENST00000503682 MSH6P52701 1360 aa15.19■□□□□ 0.02
COPS4-202ENST00000503682 C14orf37Q86TY3 774 aa15.19■□□□□ 0.02
COPS4-202ENST00000503682 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
COPS4-202ENST00000503682 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
COPS4-202ENST00000503682 RGL3Q3MIN7 710 aa15.18■□□□□ 0.02
COPS4-202ENST00000503682 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
COPS4-202ENST00000503682 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
COPS4-202ENST00000503682 SETD1AO15047 1707 aaKnown RBP15.17■□□□□ 0.02
COPS4-202ENST00000503682 MED1Q15648 1581 aaPredicted RBP15.17■□□□□ 0.02
COPS4-202ENST00000503682 CCDC144AA2RUR9 1427 aa15.15■□□□□ 0.02
COPS4-202ENST00000503682 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
COPS4-202ENST00000503682 SLAIN2Q9P270 581 aa15.14■□□□□ 0.01
COPS4-202ENST00000503682 IFT172Q9UG01 1749 aa15.13■□□□□ 0.01
COPS4-202ENST00000503682 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
COPS4-202ENST00000503682 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
COPS4-202ENST00000503682 PHLPP1O60346 1717 aa15.12■□□□□ 0.01
COPS4-202ENST00000503682 SPATA31E1Q6ZUB1 1445 aa15.11■□□□□ 0.01
COPS4-202ENST00000503682 NALCNQ8IZF0 1738 aa15.11■□□□□ 0.01
COPS4-202ENST00000503682 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
COPS4-202ENST00000503682 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
COPS4-202ENST00000503682 ATF3P18847 181 aa15.1■□□□□ 0.01
COPS4-202ENST00000503682 NCOA3Q9Y6Q9 1424 aa15.1■□□□□ 0.01
COPS4-202ENST00000503682 CADPS2Q86UW7 1296 aa15.08■□□□□ 0
COPS4-202ENST00000503682 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
COPS4-202ENST00000503682 TMEM132EQ6IEE7 984 aa15.06■□□□□ 0
COPS4-202ENST00000503682 COL16A1Q07092 1604 aaPredicted RBP15.05■□□□□ -0
COPS4-202ENST00000503682 STK26Q9P289 416 aa15.05■□□□□ -0
COPS4-202ENST00000503682 ADGRL3Q9HAR2 1447 aa15.04■□□□□ -0
COPS4-202ENST00000503682 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
COPS4-202ENST00000503682 BRINP3Q76B58 766 aa15.03■□□□□ -0
COPS4-202ENST00000503682 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
COPS4-202ENST00000503682 MST1RQ04912 1400 aa15.03■□□□□ -0
COPS4-202ENST00000503682 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
COPS4-202ENST00000503682 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
COPS4-202ENST00000503682 PIK3C2GO75747 1445 aa15.01□□□□□ -0.01
COPS4-202ENST00000503682 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
COPS4-202ENST00000503682 DCCP43146 1447 aa15.01□□□□□ -0.01
COPS4-202ENST00000503682 WAPLQ7Z5K2 1190 aa15□□□□□ -0.01
COPS4-202ENST00000503682 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
COPS4-202ENST00000503682 RGS17Q9UGC6 210 aaPredicted RBP15□□□□□ -0.01
COPS4-202ENST00000503682 AHDC1Q5TGY3 1603 aaPredicted RBP15□□□□□ -0.01
COPS4-202ENST00000503682 CFAP70Q5T0N1 1121 aa15□□□□□ -0.01
COPS4-202ENST00000503682 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
COPS4-202ENST00000503682 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
COPS4-202ENST00000503682 SOCS7O14512 581 aa14.98□□□□□ -0.01
COPS4-202ENST00000503682 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
COPS4-202ENST00000503682 JCADQ9P266 1359 aa14.98□□□□□ -0.01
COPS4-202ENST00000503682 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
COPS4-202ENST00000503682 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms