RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 C19orf67A6NJJ6 358 aa6.92□□□□□ -1.3
MATR3-202ENST00000502422 PITPNM1O00562 1244 aa6.92□□□□□ -1.3
MATR3-202ENST00000502422 CLCN6P51797 869 aa6.92□□□□□ -1.3
MATR3-202ENST00000502422 KDM5DQ9BY66 1539 aa6.92□□□□□ -1.3
MATR3-202ENST00000502422 ALKQ9UM73 1620 aa6.92□□□□□ -1.3
MATR3-202ENST00000502422 TSPY4P0CV99 314 aa6.91□□□□□ -1.3
MATR3-202ENST00000502422 TSPY10P0CW01 314 aa6.91□□□□□ -1.3
MATR3-202ENST00000502422 RSPH4AQ5TD94 716 aa6.91□□□□□ -1.3
MATR3-202ENST00000502422 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
MATR3-202ENST00000502422 FAM135BQ49AJ0 1406 aa6.9□□□□□ -1.3
MATR3-202ENST00000502422 STRCP1A6NGW2 1772 aa6.9□□□□□ -1.3
MATR3-202ENST00000502422 LRP5O75197 1615 aa6.89□□□□□ -1.31
MATR3-202ENST00000502422 MBD5Q9P267 1494 aa6.89□□□□□ -1.31
MATR3-202ENST00000502422 TXNDC2Q86VQ3 553 aa6.89□□□□□ -1.31
MATR3-202ENST00000502422 EID1Q9Y6B2 187 aa6.89□□□□□ -1.31
MATR3-202ENST00000502422 CFAP65Q6ZU64 1925 aaKnown RBP6.88□□□□□ -1.31
MATR3-202ENST00000502422 CCDC141Q6ZP82 1450 aa6.88□□□□□ -1.31
MATR3-202ENST00000502422 MIER1Q8N108 512 aa6.88□□□□□ -1.31
MATR3-202ENST00000502422 KLHL34Q8N239 644 aa6.88□□□□□ -1.31
MATR3-202ENST00000502422 PLCD3Q8N3E9 789 aa6.88□□□□□ -1.31
MATR3-202ENST00000502422 POTEMA6NI47 508 aa6.87□□□□□ -1.31
MATR3-202ENST00000502422 UPF1Q92900 1129 aaKnown RBP eCLIP6.87□□□□□ -1.31
MATR3-202ENST00000502422 TIAM1Q13009 1591 aa6.87□□□□□ -1.31
MATR3-202ENST00000502422 SCAF11Q99590 1463 aaKnown RBP6.86□□□□□ -1.31
MATR3-202ENST00000502422 LTKP29376 864 aa6.86□□□□□ -1.31
MATR3-202ENST00000502422 IFFO2Q5TF58 517 aa6.86□□□□□ -1.31
MATR3-202ENST00000502422 ZNF772Q68DY9 489 aaPredicted RBP6.86□□□□□ -1.31
MATR3-202ENST00000502422 SPOCK2Q92563 424 aa6.86□□□□□ -1.31
MATR3-202ENST00000502422 FGD6Q6ZV73 1430 aa6.85□□□□□ -1.31
MATR3-202ENST00000502422 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
MATR3-202ENST00000502422 PROSER2Q86WR7 435 aaPredicted RBP6.85□□□□□ -1.31
MATR3-202ENST00000502422 ZC3H13Q5T200 1668 aaKnown RBP6.85□□□□□ -1.31
MATR3-202ENST00000502422 EHBP1L1Q8N3D4 1523 aa6.85□□□□□ -1.31
MATR3-202ENST00000502422 BCANQ96GW7 911 aa6.85□□□□□ -1.31
MATR3-202ENST00000502422 ERVK-7P63135 1459 aa6.85□□□□□ -1.31
MATR3-202ENST00000502422 TMEM94Q12767 1356 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 SETD1AO15047 1707 aaKnown RBP6.84□□□□□ -1.31
MATR3-202ENST00000502422 UBR1Q8IWV7 1749 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
MATR3-202ENST00000502422 CCDC125Q86Z20 511 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 RBM33Q96EV2 1170 aaKnown RBP6.84□□□□□ -1.31
MATR3-202ENST00000502422 ABCC3O15438 1527 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 CAMSAP2Q08AD1 1489 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 XIRP1Q702N8 1843 aaKnown RBP6.84□□□□□ -1.31
MATR3-202ENST00000502422 CEP162Q5TB80 1403 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 ROBO1Q9Y6N7 1651 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 TRIM52Q96A61 297 aa6.84□□□□□ -1.31
MATR3-202ENST00000502422 KCNA6P17658 529 aa6.83□□□□□ -1.32
MATR3-202ENST00000502422 NEUROD1Q13562 356 aa6.83□□□□□ -1.32
MATR3-202ENST00000502422 JCADQ9P266 1359 aa6.83□□□□□ -1.32
MATR3-202ENST00000502422 SLC26A8Q96RN1 970 aa6.83□□□□□ -1.32
MATR3-202ENST00000502422 MSH6P52701 1360 aa6.82□□□□□ -1.32
MATR3-202ENST00000502422 SPATA31A6Q5VVP1 1343 aa6.82□□□□□ -1.32
MATR3-202ENST00000502422 POTEGQ6S5H5 508 aa6.82□□□□□ -1.32
MATR3-202ENST00000502422 SLAIN2Q9P270 581 aa6.82□□□□□ -1.32
MATR3-202ENST00000502422 SLIT1O75093 1534 aa6.82□□□□□ -1.32
MATR3-202ENST00000502422 NCOA2Q15596 1464 aa6.82□□□□□ -1.32
MATR3-202ENST00000502422 ARHGAP23Q9P227 1491 aa6.81□□□□□ -1.32
MATR3-202ENST00000502422 PHLPP1O60346 1717 aa6.81□□□□□ -1.32
MATR3-202ENST00000502422 CEP152O94986 1710 aa6.81□□□□□ -1.32
MATR3-202ENST00000502422 TMEM2Q9UHN6 1383 aa6.81□□□□□ -1.32
MATR3-202ENST00000502422 ARHGEF5Q12774 1597 aa6.81□□□□□ -1.32
MATR3-202ENST00000502422 RXRBP28702 533 aa6.8□□□□□ -1.32
MATR3-202ENST00000502422 C14orf37Q86TY3 774 aa6.8□□□□□ -1.32
MATR3-202ENST00000502422 ZRANB1Q9UGI0 708 aa6.8□□□□□ -1.32
MATR3-202ENST00000502422 NHSL1Q5SYE7 1610 aa6.8□□□□□ -1.32
MATR3-202ENST00000502422 EIF2AK4Q9P2K8 1649 aaKnown RBP6.8□□□□□ -1.32
MATR3-202ENST00000502422 ZEB1P37275 1124 aaPredicted RBP6.8□□□□□ -1.32
MATR3-202ENST00000502422 TRIM26Q12899 539 aaPredicted RBP6.8□□□□□ -1.32
MATR3-202ENST00000502422 SPDYE1Q8NFV5 336 aaPredicted RBP6.79□□□□□ -1.32
MATR3-202ENST00000502422 KANK1Q14678 1352 aa6.79□□□□□ -1.32
MATR3-202ENST00000502422 IDI1Q13907 227 aa6.79□□□□□ -1.32
MATR3-202ENST00000502422 GTF3C3Q9Y5Q9 886 aa6.79□□□□□ -1.32
MATR3-202ENST00000502422 SRCAPQ6ZRS2 3230 aa6.79□□□□□ -1.32
MATR3-202ENST00000502422 PIK3C2BO00750 1634 aa6.79□□□□□ -1.32
MATR3-202ENST00000502422 PRDM15P57071 1507 aaPredicted RBP6.78□□□□□ -1.32
MATR3-202ENST00000502422 CLEC11AQ9Y240 323 aa6.78□□□□□ -1.32
MATR3-202ENST00000502422 NUTM2BA6NNL0 878 aaPredicted RBP6.78□□□□□ -1.32
MATR3-202ENST00000502422 NUTM2EB1AL46 878 aaPredicted RBP6.78□□□□□ -1.32
MATR3-202ENST00000502422 HDGFP51858 240 aaKnown RBP6.78□□□□□ -1.32
MATR3-202ENST00000502422 NUTM2AQ8IVF1 878 aaPredicted RBP6.78□□□□□ -1.32
MATR3-202ENST00000502422 RRP7BPQ9NSQ0 103 aa6.78□□□□□ -1.32
MATR3-202ENST00000502422 MAP3K1Q13233 1512 aa6.78□□□□□ -1.32
MATR3-202ENST00000502422 EFCAB6Q5THR3 1501 aa6.78□□□□□ -1.32
MATR3-202ENST00000502422 ARHGAP31Q2M1Z3 1444 aa6.77□□□□□ -1.32
MATR3-202ENST00000502422 NCOA3Q9Y6Q9 1424 aa6.77□□□□□ -1.32
MATR3-202ENST00000502422 NWD1Q149M9 1564 aa6.77□□□□□ -1.33
MATR3-202ENST00000502422 ATAD2Q6PL18 1390 aa6.77□□□□□ -1.33
MATR3-202ENST00000502422 DUOX2Q9NRD8 1548 aa6.77□□□□□ -1.33
MATR3-202ENST00000502422 SHPRHQ149N8 1683 aa6.77□□□□□ -1.33
MATR3-202ENST00000502422 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
MATR3-202ENST00000502422 MAST1Q9Y2H9 1570 aa6.77□□□□□ -1.33
MATR3-202ENST00000502422 NKTRP30414 1462 aaKnown RBP6.77□□□□□ -1.33
MATR3-202ENST00000502422 MROH1Q8NDA8 1641 aa6.77□□□□□ -1.33
MATR3-202ENST00000502422 PRKAR2AP13861 404 aaKnown RBP6.76□□□□□ -1.33
MATR3-202ENST00000502422 ATF3P18847 181 aa6.76□□□□□ -1.33
MATR3-202ENST00000502422 CADPS2Q86UW7 1296 aa6.76□□□□□ -1.33
MATR3-202ENST00000502422 ECM2O94769 699 aaPredicted RBP6.76□□□□□ -1.33
MATR3-202ENST00000502422 KIF15Q9NS87 1388 aa6.76□□□□□ -1.33
MATR3-202ENST00000502422 PLEKHG5O94827 1062 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms