RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	CCDC102A	Q96A19	550 aa		11.9	□□□□□ -0.5
GARNL3-222	ENST00000498801	CDHR5	Q9HBB8	845 aa		11.9	□□□□□ -0.5
GARNL3-222	ENST00000498801	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.9	□□□□□ -0.5
GARNL3-222	ENST00000498801	GTF3C3	Q9Y5Q9	886 aa		11.9	□□□□□ -0.5
GARNL3-222	ENST00000498801	FMN1	Q68DA7	1419 aa		11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	HOXB3	P14651	431 aa	Predicted RBP	11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	FECH	P22830	423 aa		11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	PDE4D	Q08499	809 aa		11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	SLAIN1	Q8ND83	568 aa		11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	NUP153	P49790	1475 aa	Known RBP	11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	ABCC10	Q5T3U5	1492 aa		11.89	□□□□□ -0.51
GARNL3-222	ENST00000498801	LOC105371045	A0A1W2PR82	267 aa		11.88	□□□□□ -0.51
GARNL3-222	ENST00000498801	IRF6	O14896	467 aa		11.88	□□□□□ -0.51
GARNL3-222	ENST00000498801	MAP3K7	O43318	606 aa		11.88	□□□□□ -0.51
GARNL3-222	ENST00000498801	DOK7	Q18PE1	504 aa		11.88	□□□□□ -0.51
GARNL3-222	ENST00000498801	SCUBE2	Q9NQ36	999 aa		11.88	□□□□□ -0.51
GARNL3-222	ENST00000498801	RAPGEF6	Q8TEU7	1601 aa		11.88	□□□□□ -0.51
GARNL3-222	ENST00000498801	TYW1B	Q6NUM6	668 aa		11.87	□□□□□ -0.51
GARNL3-222	ENST00000498801	CLIP1	P30622	1438 aa		11.86	□□□□□ -0.51
GARNL3-222	ENST00000498801	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.86	□□□□□ -0.51
GARNL3-222	ENST00000498801	RBM33	Q96EV2	1170 aa	Known RBP	11.86	□□□□□ -0.51
GARNL3-222	ENST00000498801	DIP2B	Q9P265	1576 aa		11.86	□□□□□ -0.51
GARNL3-222	ENST00000498801	KDM4C	Q9H3R0	1056 aa		11.85	□□□□□ -0.51
GARNL3-222	ENST00000498801	ASXL2	Q76L83	1435 aa		11.85	□□□□□ -0.51
GARNL3-222	ENST00000498801	GLI2	P10070	1586 aa		11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	WDR7	Q9Y4E6	1490 aa		11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	FOSB	P53539	338 aa		11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	TSR1	Q2NL82	804 aa	Known RBP	11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	MAMSTR	Q6ZN01	415 aa		11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	FBXW7	Q969H0	707 aa		11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	CEP162	Q5TB80	1403 aa		11.84	□□□□□ -0.51
GARNL3-222	ENST00000498801	ATP10B	O94823	1461 aa		11.83	□□□□□ -0.52
GARNL3-222	ENST00000498801	RIMBP2	O15034	1052 aa		11.83	□□□□□ -0.52
GARNL3-222	ENST00000498801	NUDT7	P0C024	238 aa		11.83	□□□□□ -0.52
GARNL3-222	ENST00000498801	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
GARNL3-222	ENST00000498801	ZSWIM6	Q9HCJ5	1215 aa		11.83	□□□□□ -0.52
GARNL3-222	ENST00000498801	HECW1	Q76N89	1606 aa		11.82	□□□□□ -0.52
GARNL3-222	ENST00000498801	RANGAP1	P46060	587 aa	Predicted RBP	11.82	□□□□□ -0.52
GARNL3-222	ENST00000498801	AMHR2	Q16671	573 aa		11.82	□□□□□ -0.52
GARNL3-222	ENST00000498801	ARSI	Q5FYB1	569 aa		11.82	□□□□□ -0.52
GARNL3-222	ENST00000498801	CASKIN1	Q8WXD9	1431 aa		11.82	□□□□□ -0.52
GARNL3-222	ENST00000498801	FYCO1	Q9BQS8	1478 aa		11.82	□□□□□ -0.52
GARNL3-222	ENST00000498801	EPRS	P07814	1512 aa	Known RBP	11.81	□□□□□ -0.52
GARNL3-222	ENST00000498801	GPR153	Q6NV75	609 aa		11.8	□□□□□ -0.52
GARNL3-222	ENST00000498801	ZNF454	Q8N9F8	522 aa		11.8	□□□□□ -0.52
GARNL3-222	ENST00000498801	PCF11	O94913	1555 aa	Known RBP	11.79	□□□□□ -0.52
GARNL3-222	ENST00000498801	PARP9	Q8IXQ6	854 aa		11.78	□□□□□ -0.52
GARNL3-222	ENST00000498801	ZNF710	Q8N1W2	664 aa		11.78	□□□□□ -0.52
GARNL3-222	ENST00000498801	ZDHHC16	Q969W1	377 aa		11.78	□□□□□ -0.52
GARNL3-222	ENST00000498801	CCDC18	Q5T9S5	1454 aa		11.77	□□□□□ -0.52
GARNL3-222	ENST00000498801	TIMELESS	Q9UNS1	1208 aa		11.76	□□□□□ -0.53
GARNL3-222	ENST00000498801	KIF13A	Q9H1H9	1805 aa		11.76	□□□□□ -0.53
GARNL3-222	ENST00000498801	MAP3K4	Q9Y6R4	1608 aa		11.75	□□□□□ -0.53
GARNL3-222	ENST00000498801	C6orf132	Q5T0Z8	1188 aa		11.75	□□□□□ -0.53
GARNL3-222	ENST00000498801	DAXX	Q9UER7	740 aa	Predicted RBP	11.75	□□□□□ -0.53
GARNL3-222	ENST00000498801	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.75	□□□□□ -0.53
GARNL3-222	ENST00000498801	IL27	Q8NEV9	243 aa		11.74	□□□□□ -0.53
GARNL3-222	ENST00000498801	ADAM33	Q9BZ11	813 aa		11.74	□□□□□ -0.53
GARNL3-222	ENST00000498801	CDK13	Q14004	1512 aa	Known RBP	11.74	□□□□□ -0.53
GARNL3-222	ENST00000498801	MAGI3	Q5TCQ9	1506 aa		11.73	□□□□□ -0.53
GARNL3-222	ENST00000498801	ABCA9	Q8IUA7	1624 aa		11.73	□□□□□ -0.53
GARNL3-222	ENST00000498801	CERK	Q8TCT0	537 aa		11.73	□□□□□ -0.53
GARNL3-222	ENST00000498801	VPS8	Q8N3P4	1428 aa		11.72	□□□□□ -0.53
GARNL3-222	ENST00000498801	TTLL12	Q14166	644 aa	Predicted RBP	11.72	□□□□□ -0.53
GARNL3-222	ENST00000498801	LHX6	Q9UPM6	363 aa		11.72	□□□□□ -0.53
GARNL3-222	ENST00000498801	FAM69C	Q0P6D2	419 aa		11.71	□□□□□ -0.53
GARNL3-222	ENST00000498801	FAM117A	Q9C073	453 aa		11.71	□□□□□ -0.53
GARNL3-222	ENST00000498801	CFAP43	Q8NDM7	1665 aa		11.71	□□□□□ -0.54
GARNL3-222	ENST00000498801	TRO	Q12816	1431 aa	Predicted RBP	11.7	□□□□□ -0.54
GARNL3-222	ENST00000498801	PADI6	Q6TGC4	694 aa		11.7	□□□□□ -0.54
GARNL3-222	ENST00000498801	TEX14	Q8IWB6	1497 aa		11.7	□□□□□ -0.54
GARNL3-222	ENST00000498801	PPRC1	Q5VV67	1664 aa	Known RBP	11.69	□□□□□ -0.54
GARNL3-222	ENST00000498801	SNPH	O15079	494 aa		11.69	□□□□□ -0.54
GARNL3-222	ENST00000498801	MAP3K1	Q13233	1512 aa		11.69	□□□□□ -0.54
GARNL3-222	ENST00000498801	ARAP3	Q8WWN8	1544 aa		11.69	□□□□□ -0.54
GARNL3-222	ENST00000498801	PPP4R3B	Q5MIZ7	849 aa		11.68	□□□□□ -0.54
GARNL3-222	ENST00000498801	RBM27	Q9P2N5	1060 aa	Known RBP	11.68	□□□□□ -0.54
GARNL3-222	ENST00000498801	LRRIQ1	Q96JM4	1722 aa		11.68	□□□□□ -0.54
GARNL3-222	ENST00000498801	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
GARNL3-222	ENST00000498801	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.67	□□□□□ -0.54
GARNL3-222	ENST00000498801	DDRGK1	Q96HY6	314 aa		11.67	□□□□□ -0.54
GARNL3-222	ENST00000498801	PSD	A5PKW4	1024 aa	Predicted RBP	11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	HOXB1	P14653	301 aa	Predicted RBP	11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	FAM161A	Q3B820	660 aa		11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	TTC13	Q8NBP0	860 aa		11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	PHOX2B	Q99453	314 aa		11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	REPIN1	Q9BWE0	567 aa	Known RBP	11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	KIF14	Q15058	1648 aa		11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	CD109	Q6YHK3	1445 aa		11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	PHLDB1	Q86UU1	1377 aa		11.66	□□□□□ -0.54
GARNL3-222	ENST00000498801	PLEKHG3	A1L390	1219 aa		11.65	□□□□□ -0.54
GARNL3-222	ENST00000498801	PLEKHD1	A6NEE1	506 aa		11.65	□□□□□ -0.54
GARNL3-222	ENST00000498801	ERICH6	Q7L0X2	663 aa		11.65	□□□□□ -0.54
GARNL3-222	ENST00000498801	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.65	□□□□□ -0.54
GARNL3-222	ENST00000498801	ADGRG1	Q9Y653	693 aa		11.65	□□□□□ -0.54
GARNL3-222	ENST00000498801	NEO1	Q92859	1461 aa		11.64	□□□□□ -0.55
GARNL3-222	ENST00000498801	TTC37	Q6PGP7	1564 aa		11.64	□□□□□ -0.55
GARNL3-222	ENST00000498801	METTL3	Q86U44	580 aa	Known RBP	11.64	□□□□□ -0.55
GARNL3-222	ENST00000498801	TMUB1	Q9BVT8	246 aa		11.64	□□□□□ -0.55

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