RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ANP32AP39687 249 aaKnown RBP21.91■■□□□ 1.1
COL6A1-206ENST00000498614 DISP3Q9P2K9 1392 aa21.91■■□□□ 1.1
COL6A1-206ENST00000498614 LRPPRCP42704 1394 aaKnown RBP21.91■■□□□ 1.1
COL6A1-206ENST00000498614 TESK2Q96S53 571 aa21.9■■□□□ 1.1
COL6A1-206ENST00000498614 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
COL6A1-206ENST00000498614 PARD3Q8TEW0 1356 aa21.87■■□□□ 1.09
COL6A1-206ENST00000498614 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
COL6A1-206ENST00000498614 ZMYM4Q5VZL5 1548 aa21.86■■□□□ 1.09
COL6A1-206ENST00000498614 NLRP13Q86W25 1043 aa21.85■■□□□ 1.09
COL6A1-206ENST00000498614 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
COL6A1-206ENST00000498614 MLECQ14165 292 aa21.84■■□□□ 1.09
COL6A1-206ENST00000498614 ZBTB47Q9UFB7 747 aaPredicted RBP21.84■■□□□ 1.09
COL6A1-206ENST00000498614 CC2D1BQ5T0F9 858 aaKnown RBP21.83■■□□□ 1.09
COL6A1-206ENST00000498614 TMF1P82094 1093 aa21.83■■□□□ 1.08
COL6A1-206ENST00000498614 PANK3Q9H999 370 aa21.82■■□□□ 1.08
COL6A1-206ENST00000498614 RRP1P56182 461 aaKnown RBP21.81■■□□□ 1.08
COL6A1-206ENST00000498614 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
COL6A1-206ENST00000498614 TRPM2O94759 1503 aa21.8■■□□□ 1.08
COL6A1-206ENST00000498614 MADDQ8WXG6 1647 aa21.8■■□□□ 1.08
COL6A1-206ENST00000498614 SPHKAPQ2M3C7 1700 aa21.8■■□□□ 1.08
COL6A1-206ENST00000498614 EXOC6Q8TAG9 804 aa21.79■■□□□ 1.08
COL6A1-206ENST00000498614 CEP152O94986 1710 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 DEPDC5O75140 1603 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 CLTCL1P53675 1640 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 MROH1Q8NDA8 1641 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 WASHC2CQ9Y4E1 1318 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 KANK1Q14678 1352 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 SIGLEC1Q9BZZ2 1709 aa21.78■■□□□ 1.08
COL6A1-206ENST00000498614 TET3O43151 1660 aa21.75■■□□□ 1.07
COL6A1-206ENST00000498614 PTPRTO14522 1441 aa21.75■■□□□ 1.07
COL6A1-206ENST00000498614 IQGAP1P46940 1657 aa21.74■■□□□ 1.07
COL6A1-206ENST00000498614 RCAN3Q9UKA8 241 aa21.74■■□□□ 1.07
COL6A1-206ENST00000498614 RTL5Q5HYW3 569 aaPredicted RBP21.74■■□□□ 1.07
COL6A1-206ENST00000498614 NPM2Q86SE8 214 aaKnown RBP21.72■■□□□ 1.07
COL6A1-206ENST00000498614 ARHGEF40Q8TER5 1519 aa21.72■■□□□ 1.07
COL6A1-206ENST00000498614 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.07
COL6A1-206ENST00000498614 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.07
COL6A1-206ENST00000498614 VWDEQ8N2E2 1590 aa21.69■■□□□ 1.06
COL6A1-206ENST00000498614 PDE4AP27815 886 aa21.68■■□□□ 1.06
COL6A1-206ENST00000498614 SCAF11Q99590 1463 aaKnown RBP21.68■■□□□ 1.06
COL6A1-206ENST00000498614 UGGT1Q9NYU2 1555 aa21.66■■□□□ 1.06
COL6A1-206ENST00000498614 CDCA7LQ96GN5 454 aa21.65■■□□□ 1.06
COL6A1-206ENST00000498614 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
COL6A1-206ENST00000498614 BACH2Q9BYV9 841 aa21.64■■□□□ 1.05
COL6A1-206ENST00000498614 BLMP54132 1417 aaPredicted RBP21.64■■□□□ 1.05
COL6A1-206ENST00000498614 ABCC3O15438 1527 aa21.64■■□□□ 1.05
COL6A1-206ENST00000498614 STAC3Q96MF2 364 aa21.63■■□□□ 1.05
COL6A1-206ENST00000498614 KNSTRNQ9Y448 316 aa21.63■■□□□ 1.05
COL6A1-206ENST00000498614 NPATQ14207 1427 aa21.62■■□□□ 1.05
COL6A1-206ENST00000498614 REREQ9P2R6 1566 aa21.62■■□□□ 1.05
COL6A1-206ENST00000498614 FBXO31Q5XUX0 539 aaPredicted RBP21.61■■□□□ 1.05
COL6A1-206ENST00000498614 AGLP35573 1532 aa21.61■■□□□ 1.05
COL6A1-206ENST00000498614 MS4A1P11836 297 aa21.61■■□□□ 1.05
COL6A1-206ENST00000498614 SYNMO15061 1565 aa21.61■■□□□ 1.05
COL6A1-206ENST00000498614 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
COL6A1-206ENST00000498614 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
COL6A1-206ENST00000498614 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
COL6A1-206ENST00000498614 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
COL6A1-206ENST00000498614 PLIN1O60240 522 aa21.59■■□□□ 1.05
COL6A1-206ENST00000498614 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
COL6A1-206ENST00000498614 EIF3AQ14152 1382 aaKnown RBP21.58■■□□□ 1.05
COL6A1-206ENST00000498614 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.05
COL6A1-206ENST00000498614 PPP2R1AP30153 589 aa21.58■■□□□ 1.05
COL6A1-206ENST00000498614 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.05
COL6A1-206ENST00000498614 ESF1Q9H501 851 aaKnown RBP21.58■■□□□ 1.05
COL6A1-206ENST00000498614 MYOM1P52179 1685 aa21.58■■□□□ 1.05
COL6A1-206ENST00000498614 LMTK2Q8IWU2 1503 aa21.58■■□□□ 1.05
COL6A1-206ENST00000498614 ADAMTS8Q9UP79 889 aa21.58■■□□□ 1.04
COL6A1-206ENST00000498614 INSRP06213 1382 aa21.57■■□□□ 1.04
COL6A1-206ENST00000498614 KIF1BO60333 1816 aa21.57■■□□□ 1.04
COL6A1-206ENST00000498614 ADGRF5Q8IZF2 1346 aa21.57■■□□□ 1.04
COL6A1-206ENST00000498614 NEURL4Q96JN8 1562 aa21.56■■□□□ 1.04
COL6A1-206ENST00000498614 SKAP1Q86WV1 359 aa21.55■■□□□ 1.04
COL6A1-206ENST00000498614 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
COL6A1-206ENST00000498614 MROH2AA6NES4 1674 aa21.55■■□□□ 1.04
COL6A1-206ENST00000498614 NEFMP07197 916 aa21.54■■□□□ 1.04
COL6A1-206ENST00000498614 CHGAP10645 457 aaKnown RBP21.54■■□□□ 1.04
COL6A1-206ENST00000498614 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
COL6A1-206ENST00000498614 KDM5AP29375 1690 aaKnown RBP21.54■■□□□ 1.04
COL6A1-206ENST00000498614 CRBNQ96SW2 442 aa21.54■■□□□ 1.04
COL6A1-206ENST00000498614 MYOM2P54296 1465 aa21.54■■□□□ 1.04
COL6A1-206ENST00000498614 CLTCQ00610 1675 aaKnown RBP21.54■■□□□ 1.04
COL6A1-206ENST00000498614 CEBPAP49715 358 aaPredicted RBP21.52■■□□□ 1.04
COL6A1-206ENST00000498614 IFT172Q9UG01 1749 aa21.52■■□□□ 1.04
COL6A1-206ENST00000498614 WDR43Q15061 677 aaKnown RBP eCLIP21.52■■□□□ 1.04
COL6A1-206ENST00000498614 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
COL6A1-206ENST00000498614 ZMYM3Q14202 1370 aa21.5■■□□□ 1.03
COL6A1-206ENST00000498614 ERVK-7P63135 1459 aa21.49■■□□□ 1.03
COL6A1-206ENST00000498614 IDI1Q13907 227 aa21.48■■□□□ 1.03
COL6A1-206ENST00000498614 USP35Q9P2H5 1018 aa21.48■■□□□ 1.03
COL6A1-206ENST00000498614 ZC3H13Q5T200 1668 aaKnown RBP21.47■■□□□ 1.03
COL6A1-206ENST00000498614 IL27Q8NEV9 243 aa21.47■■□□□ 1.03
COL6A1-206ENST00000498614 NOS1P29475 1434 aa21.46■■□□□ 1.03
COL6A1-206ENST00000498614 ARHGAP31Q2M1Z3 1444 aa21.46■■□□□ 1.03
COL6A1-206ENST00000498614 PLEKHH1Q9ULM0 1364 aa21.46■■□□□ 1.03
COL6A1-206ENST00000498614 C20orf194Q5TEA3 1177 aa21.46■■□□□ 1.03
COL6A1-206ENST00000498614 PIK3C2GO75747 1445 aa21.45■■□□□ 1.02
COL6A1-206ENST00000498614 PPM1GO15355 546 aaPredicted RBP21.45■■□□□ 1.02
COL6A1-206ENST00000498614 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
COL6A1-206ENST00000498614 ADGRB3O60242 1522 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms