RNA–Protein interactions for RNA: ENST00000498439.1

CHTF18-213, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 673 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-213ENST00000498439 TET3O43151 1660 aa27.91■■■□□ 2.06
CHTF18-213ENST00000498439 XIRP1Q702N8 1843 aaKnown RBP27.9■■■□□ 2.06
CHTF18-213ENST00000498439 ROCK1Q13464 1354 aa27.88■■■□□ 2.05
CHTF18-213ENST00000498439 CHGAP10645 457 aaKnown RBP27.87■■■□□ 2.05
CHTF18-213ENST00000498439 NKTRP30414 1462 aaKnown RBP27.86■■■□□ 2.05
CHTF18-213ENST00000498439 GCC2Q8IWJ2 1684 aa27.86■■■□□ 2.05
CHTF18-213ENST00000498439 MSH6P52701 1360 aa27.86■■■□□ 2.05
CHTF18-213ENST00000498439 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
CHTF18-213ENST00000498439 TBX22Q9Y458 520 aa27.84■■■□□ 2.05
CHTF18-213ENST00000498439 RIMS2Q9UQ26 1411 aa27.83■■■□□ 2.05
CHTF18-213ENST00000498439 UNC13BO14795 1591 aa27.8■■■□□ 2.04
CHTF18-213ENST00000498439 ZFYVE9O95405 1425 aa27.79■■■□□ 2.04
CHTF18-213ENST00000498439 NWD1Q149M9 1564 aa27.78■■■□□ 2.04
CHTF18-213ENST00000498439 NCOA3Q9Y6Q9 1424 aa27.78■■■□□ 2.04
CHTF18-213ENST00000498439 SLAIN2Q9P270 581 aa27.78■■■□□ 2.04
CHTF18-213ENST00000498439 NUP155O75694 1391 aa27.77■■■□□ 2.04
CHTF18-213ENST00000498439 TMEM131LA2VDJ0 1609 aa27.77■■■□□ 2.04
CHTF18-213ENST00000498439 CHD2O14647 1828 aaKnown RBP27.76■■■□□ 2.04
CHTF18-213ENST00000498439 MYO5BQ9ULV0 1848 aa27.76■■■□□ 2.03
CHTF18-213ENST00000498439 ITGAEP38570 1179 aa27.75■■■□□ 2.03
CHTF18-213ENST00000498439 RBM33Q96EV2 1170 aaKnown RBP27.75■■■□□ 2.03
CHTF18-213ENST00000498439 C14orf37Q86TY3 774 aa27.74■■■□□ 2.03
CHTF18-213ENST00000498439 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
CHTF18-213ENST00000498439 ROBO1Q9Y6N7 1651 aa27.72■■■□□ 2.03
CHTF18-213ENST00000498439 IQGAP3Q86VI3 1631 aa27.72■■■□□ 2.03
CHTF18-213ENST00000498439 E9PCH4 1651 aa27.72■■■□□ 2.03
CHTF18-213ENST00000498439 CADPS2Q86UW7 1296 aa27.69■■■□□ 2.02
CHTF18-213ENST00000498439 C19orf44Q9H6X5 657 aa27.68■■■□□ 2.02
CHTF18-213ENST00000498439 DIP2AQ14689 1571 aa27.67■■■□□ 2.02
CHTF18-213ENST00000498439 ATF3P18847 181 aa27.66■■■□□ 2.02
CHTF18-213ENST00000498439 NUTM2DQ5VT03 806 aaPredicted RBP27.65■■■□□ 2.02
CHTF18-213ENST00000498439 RGS17Q9UGC6 210 aaPredicted RBP27.63■■■□□ 2.01
CHTF18-213ENST00000498439 JCADQ9P266 1359 aa27.62■■■□□ 2.01
CHTF18-213ENST00000498439 ZNF326Q5BKZ1 582 aaKnown RBP27.62■■■□□ 2.01
CHTF18-213ENST00000498439 AMOTL2Q9Y2J4 779 aa27.61■■■□□ 2.01
CHTF18-213ENST00000498439 ADAMTS13Q76LX8 1427 aa27.6■■■□□ 2.01
CHTF18-213ENST00000498439 PHLPP1O60346 1717 aa27.6■■■□□ 2.01
CHTF18-213ENST00000498439 TRPM2O94759 1503 aa27.6■■■□□ 2.01
CHTF18-213ENST00000498439 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
CHTF18-213ENST00000498439 SPATA31A6Q5VVP1 1343 aa27.54■■■□□ 2
CHTF18-213ENST00000498439 SPHKAPQ2M3C7 1700 aa27.53■■■□□ 2
CHTF18-213ENST00000498439 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
CHTF18-213ENST00000498439 POTEAQ6S8J7 498 aa27.5■■□□□ 1.99
CHTF18-213ENST00000498439 MEX3CQ5U5Q3 659 aaKnown RBP27.49■■□□□ 1.99
CHTF18-213ENST00000498439 DCCP43146 1447 aa27.47■■□□□ 1.99
CHTF18-213ENST00000498439 ZNF772Q68DY9 489 aaPredicted RBP27.46■■□□□ 1.99
CHTF18-213ENST00000498439 SETBP1Q9Y6X0 1596 aa27.44■■□□□ 1.98
CHTF18-213ENST00000498439 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
CHTF18-213ENST00000498439 VGFO15240 615 aaPredicted RBP27.44■■□□□ 1.98
CHTF18-213ENST00000498439 TRIM52Q96A61 297 aa27.44■■□□□ 1.98
CHTF18-213ENST00000498439 PTPRUQ92729 1446 aa27.43■■□□□ 1.98
CHTF18-213ENST00000498439 KIF1BO60333 1816 aa27.43■■□□□ 1.98
CHTF18-213ENST00000498439 COL16A1Q07092 1604 aaPredicted RBP27.42■■□□□ 1.98
CHTF18-213ENST00000498439 AHDC1Q5TGY3 1603 aaPredicted RBP27.41■■□□□ 1.98
CHTF18-213ENST00000498439 BRINP3Q76B58 766 aa27.41■■□□□ 1.98
CHTF18-213ENST00000498439 LRRC59Q96AG4 307 aaKnown RBP27.39■■□□□ 1.98
CHTF18-213ENST00000498439 RPGRIP1LQ68CZ1 1315 aa27.39■■□□□ 1.97
CHTF18-213ENST00000498439 NAIPQ13075 1403 aa27.38■■□□□ 1.97
CHTF18-213ENST00000498439 METP08581 1390 aa27.35■■□□□ 1.97
CHTF18-213ENST00000498439 NRXN3Q9Y4C0 1643 aa27.35■■□□□ 1.97
CHTF18-213ENST00000498439 SLC4A1APQ9BWU0 796 aaKnown RBP27.35■■□□□ 1.97
CHTF18-213ENST00000498439 SHPRHQ149N8 1683 aa27.35■■□□□ 1.97
CHTF18-213ENST00000498439 XRN1Q8IZH2 1706 aaKnown RBP27.35■■□□□ 1.97
CHTF18-213ENST00000498439 CLTCL1P53675 1640 aa27.32■■□□□ 1.96
CHTF18-213ENST00000498439 NEXMIFQ5QGS0 1516 aa27.31■■□□□ 1.96
CHTF18-213ENST00000498439 HFM1A2PYH4 1435 aa27.3■■□□□ 1.96
CHTF18-213ENST00000498439 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
CHTF18-213ENST00000498439 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
CHTF18-213ENST00000498439 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
CHTF18-213ENST00000498439 MST1RQ04912 1400 aa27.29■■□□□ 1.96
CHTF18-213ENST00000498439 SETD5Q9C0A6 1442 aa27.29■■□□□ 1.96
CHTF18-213ENST00000498439 ADGRL3Q9HAR2 1447 aa27.29■■□□□ 1.96
CHTF18-213ENST00000498439 RXRBP28702 533 aa27.28■■□□□ 1.96
CHTF18-213ENST00000498439 ASXL1Q8IXJ9 1541 aa27.27■■□□□ 1.96
CHTF18-213ENST00000498439 ACIN1Q9UKV3 1341 aaKnown RBP27.26■■□□□ 1.95
CHTF18-213ENST00000498439 LRP6O75581 1613 aa27.25■■□□□ 1.95
CHTF18-213ENST00000498439 NHSL1Q5SYE7 1610 aa27.21■■□□□ 1.95
CHTF18-213ENST00000498439 PTCH1Q13635 1447 aa27.21■■□□□ 1.95
CHTF18-213ENST00000498439 AFF2P51816 1311 aa27.17■■□□□ 1.94
CHTF18-213ENST00000498439 C1orf167Q5SNV9 1468 aa27.16■■□□□ 1.94
CHTF18-213ENST00000498439 NALCNQ8IZF0 1738 aa27.16■■□□□ 1.94
CHTF18-213ENST00000498439 SETD1AO15047 1707 aaKnown RBP27.14■■□□□ 1.94
CHTF18-213ENST00000498439 CCDC144AA2RUR9 1427 aa27.14■■□□□ 1.93
CHTF18-213ENST00000498439 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
CHTF18-213ENST00000498439 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
CHTF18-213ENST00000498439 PRAG1Q86YV5 1406 aa27.13■■□□□ 1.93
CHTF18-213ENST00000498439 PPLO60437 1756 aa27.12■■□□□ 1.93
CHTF18-213ENST00000498439 PNPLA6Q8IY17 1366 aa27.12■■□□□ 1.93
CHTF18-213ENST00000498439 ROBO2Q9HCK4 1378 aa27.12■■□□□ 1.93
CHTF18-213ENST00000498439 QTRT2Q9H974 415 aaKnown RBP27.12■■□□□ 1.93
CHTF18-213ENST00000498439 RBM6P78332 1123 aaKnown RBP27.11■■□□□ 1.93
CHTF18-213ENST00000498439 DDX17Q92841 729 aaKnown RBP27.11■■□□□ 1.93
CHTF18-213ENST00000498439 UPF1Q92900 1129 aaKnown RBP eCLIP27.11■■□□□ 1.93
CHTF18-213ENST00000498439 NGLY1Q96IV0 654 aa27.11■■□□□ 1.93
CHTF18-213ENST00000498439 SOS2Q07890 1332 aaPredicted RBP27.1■■□□□ 1.93
CHTF18-213ENST00000498439 ANKRD30BQ9BXX2 1392 aa27.09■■□□□ 1.93
CHTF18-213ENST00000498439 RGL3Q3MIN7 710 aa27.09■■□□□ 1.93
CHTF18-213ENST00000498439 ORAI2Q96SN7 254 aa27.09■■□□□ 1.93
CHTF18-213ENST00000498439 MPHOSPH9Q99550 1183 aa27.09■■□□□ 1.93
CHTF18-213ENST00000498439 ESCO1Q5FWF5 840 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms