RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ZFYVE9O95405 1425 aa28.57■■■□□ 2.16
PRKCB-209ENST00000498058 TMEM131LA2VDJ0 1609 aa28.57■■■□□ 2.16
PRKCB-209ENST00000498058 RBM33Q96EV2 1170 aaKnown RBP28.56■■■□□ 2.16
PRKCB-209ENST00000498058 TMEM94Q12767 1356 aa28.55■■■□□ 2.16
PRKCB-209ENST00000498058 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
PRKCB-209ENST00000498058 ITGAEP38570 1179 aa28.52■■■□□ 2.16
PRKCB-209ENST00000498058 NWD1Q149M9 1564 aa28.52■■■□□ 2.16
PRKCB-209ENST00000498058 RIMS2Q9UQ26 1411 aa28.51■■■□□ 2.15
PRKCB-209ENST00000498058 PROSER2Q86WR7 435 aaPredicted RBP28.48■■■□□ 2.15
PRKCB-209ENST00000498058 PLEKHG1Q9ULL1 1385 aa28.48■■■□□ 2.15
PRKCB-209ENST00000498058 BCANQ96GW7 911 aa28.46■■■□□ 2.15
PRKCB-209ENST00000498058 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
PRKCB-209ENST00000498058 NUP155O75694 1391 aa28.45■■■□□ 2.14
PRKCB-209ENST00000498058 NKTRP30414 1462 aaKnown RBP28.45■■■□□ 2.14
PRKCB-209ENST00000498058 FAM135BQ49AJ0 1406 aa28.44■■■□□ 2.14
PRKCB-209ENST00000498058 CHGAP10645 457 aaKnown RBP28.44■■■□□ 2.14
PRKCB-209ENST00000498058 NUTM2DQ5VT03 806 aaPredicted RBP28.43■■■□□ 2.14
PRKCB-209ENST00000498058 PPP1R15AO75807 674 aaPredicted RBP28.4■■■□□ 2.14
PRKCB-209ENST00000498058 ROBO1Q9Y6N7 1651 aa28.39■■■□□ 2.14
PRKCB-209ENST00000498058 ADAMTS13Q76LX8 1427 aa28.39■■■□□ 2.14
PRKCB-209ENST00000498058 TBX22Q9Y458 520 aa28.37■■■□□ 2.13
PRKCB-209ENST00000498058 HDGFP51858 240 aaKnown RBP28.36■■■□□ 2.13
PRKCB-209ENST00000498058 PHF23Q9BUL5 403 aaPredicted RBP28.36■■■□□ 2.13
PRKCB-209ENST00000498058 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.34■■■□□ 2.13
PRKCB-209ENST00000498058 RGS17Q9UGC6 210 aaPredicted RBP28.33■■■□□ 2.13
PRKCB-209ENST00000498058 MSH6P52701 1360 aa28.31■■■□□ 2.12
PRKCB-209ENST00000498058 SPHKAPQ2M3C7 1700 aa28.31■■■□□ 2.12
PRKCB-209ENST00000498058 RRBP1Q9P2E9 1410 aaKnown RBP28.3■■■□□ 2.12
PRKCB-209ENST00000498058 SLAIN2Q9P270 581 aa28.28■■■□□ 2.12
PRKCB-209ENST00000498058 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
PRKCB-209ENST00000498058 PTPRUQ92729 1446 aa28.27■■■□□ 2.12
PRKCB-209ENST00000498058 NRXN3Q9Y4C0 1643 aa28.25■■■□□ 2.11
PRKCB-209ENST00000498058 NAIPQ13075 1403 aa28.24■■■□□ 2.11
PRKCB-209ENST00000498058 PIK3R4Q99570 1358 aa28.23■■■□□ 2.11
PRKCB-209ENST00000498058 PHLPP1O60346 1717 aa28.22■■■□□ 2.11
PRKCB-209ENST00000498058 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.22■■■□□ 2.11
PRKCB-209ENST00000498058 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
PRKCB-209ENST00000498058 CLTCL1P53675 1640 aa28.21■■■□□ 2.11
PRKCB-209ENST00000498058 TRPM2O94759 1503 aa28.21■■■□□ 2.11
PRKCB-209ENST00000498058 AMOTL2Q9Y2J4 779 aa28.19■■■□□ 2.1
PRKCB-209ENST00000498058 SETBP1Q9Y6X0 1596 aa28.17■■■□□ 2.1
PRKCB-209ENST00000498058 XRN1Q8IZH2 1706 aaKnown RBP28.15■■■□□ 2.1
PRKCB-209ENST00000498058 COL16A1Q07092 1604 aaPredicted RBP28.15■■■□□ 2.1
PRKCB-209ENST00000498058 C14orf37Q86TY3 774 aa28.15■■■□□ 2.1
PRKCB-209ENST00000498058 ZNF326Q5BKZ1 582 aaKnown RBP28.14■■■□□ 2.1
PRKCB-209ENST00000498058 C19orf44Q9H6X5 657 aa28.14■■■□□ 2.1
PRKCB-209ENST00000498058 NEXMIFQ5QGS0 1516 aa28.13■■■□□ 2.09
PRKCB-209ENST00000498058 POTEAQ6S8J7 498 aa28.13■■■□□ 2.09
PRKCB-209ENST00000498058 METP08581 1390 aa28.12■■■□□ 2.09
PRKCB-209ENST00000498058 JCADQ9P266 1359 aa28.1■■■□□ 2.09
PRKCB-209ENST00000498058 CADPS2Q86UW7 1296 aa28.09■■■□□ 2.09
PRKCB-209ENST00000498058 KIF1BO60333 1816 aa28.08■■■□□ 2.09
PRKCB-209ENST00000498058 HFM1A2PYH4 1435 aa28.08■■■□□ 2.09
PRKCB-209ENST00000498058 ATF3P18847 181 aa28.07■■■□□ 2.08
PRKCB-209ENST00000498058 AHDC1Q5TGY3 1603 aaPredicted RBP28.07■■■□□ 2.08
PRKCB-209ENST00000498058 TRIM52Q96A61 297 aa28.04■■■□□ 2.08
PRKCB-209ENST00000498058 BRINP3Q76B58 766 aa28.03■■■□□ 2.08
PRKCB-209ENST00000498058 LRP6O75581 1613 aa28.03■■■□□ 2.08
PRKCB-209ENST00000498058 DCCP43146 1447 aa28.01■■■□□ 2.07
PRKCB-209ENST00000498058 SETD1AO15047 1707 aaKnown RBP28■■■□□ 2.07
PRKCB-209ENST00000498058 MST1RQ04912 1400 aa28■■■□□ 2.07
PRKCB-209ENST00000498058 SLC4A1APQ9BWU0 796 aaKnown RBP27.97■■■□□ 2.07
PRKCB-209ENST00000498058 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
PRKCB-209ENST00000498058 SHPRHQ149N8 1683 aa27.97■■■□□ 2.07
PRKCB-209ENST00000498058 ASXL1Q8IXJ9 1541 aa27.96■■■□□ 2.07
PRKCB-209ENST00000498058 FOXD1Q16676 465 aa27.95■■■□□ 2.06
PRKCB-209ENST00000498058 ADGRL3Q9HAR2 1447 aa27.94■■■□□ 2.06
PRKCB-209ENST00000498058 SPATA31A6Q5VVP1 1343 aa27.93■■■□□ 2.06
PRKCB-209ENST00000498058 PPLO60437 1756 aa27.92■■■□□ 2.06
PRKCB-209ENST00000498058 NHSL1Q5SYE7 1610 aa27.92■■■□□ 2.06
PRKCB-209ENST00000498058 VGFO15240 615 aaPredicted RBP27.9■■■□□ 2.06
PRKCB-209ENST00000498058 DDX17Q92841 729 aaKnown RBP27.9■■■□□ 2.06
PRKCB-209ENST00000498058 ROBO2Q9HCK4 1378 aa27.89■■■□□ 2.06
PRKCB-209ENST00000498058 RPGRIP1LQ68CZ1 1315 aa27.87■■■□□ 2.05
PRKCB-209ENST00000498058 SETD5Q9C0A6 1442 aa27.86■■■□□ 2.05
PRKCB-209ENST00000498058 PTCH1Q13635 1447 aa27.85■■■□□ 2.05
PRKCB-209ENST00000498058 MEX3CQ5U5Q3 659 aaKnown RBP27.83■■■□□ 2.05
PRKCB-209ENST00000498058 C1orf167Q5SNV9 1468 aa27.83■■■□□ 2.04
PRKCB-209ENST00000498058 NUTM2BA6NNL0 878 aaPredicted RBP27.82■■■□□ 2.04
PRKCB-209ENST00000498058 NUTM2EB1AL46 878 aaPredicted RBP27.82■■■□□ 2.04
PRKCB-209ENST00000498058 NUTM2AQ8IVF1 878 aaPredicted RBP27.82■■■□□ 2.04
PRKCB-209ENST00000498058 PRAG1Q86YV5 1406 aa27.82■■■□□ 2.04
PRKCB-209ENST00000498058 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
PRKCB-209ENST00000498058 MPHOSPH9Q99550 1183 aa27.79■■■□□ 2.04
PRKCB-209ENST00000498058 SPATA31E1Q6ZUB1 1445 aa27.78■■■□□ 2.04
PRKCB-209ENST00000498058 ORAI2Q96SN7 254 aa27.77■■■□□ 2.04
PRKCB-209ENST00000498058 PNPLA6Q8IY17 1366 aa27.76■■■□□ 2.03
PRKCB-209ENST00000498058 IFT172Q9UG01 1749 aa27.76■■■□□ 2.03
PRKCB-209ENST00000498058 RGL3Q3MIN7 710 aa27.76■■■□□ 2.03
PRKCB-209ENST00000498058 ZNF772Q68DY9 489 aaPredicted RBP27.76■■■□□ 2.03
PRKCB-209ENST00000498058 LRRC59Q96AG4 307 aaKnown RBP27.76■■■□□ 2.03
PRKCB-209ENST00000498058 CCDC144AA2RUR9 1427 aa27.75■■■□□ 2.03
PRKCB-209ENST00000498058 LAMC1P11047 1609 aa27.75■■■□□ 2.03
PRKCB-209ENST00000498058 AFF2P51816 1311 aa27.7■■■□□ 2.03
PRKCB-209ENST00000498058 SOS2Q07890 1332 aaPredicted RBP27.68■■■□□ 2.02
PRKCB-209ENST00000498058 STK26Q9P289 416 aa27.66■■■□□ 2.02
PRKCB-209ENST00000498058 ANKRD30BQ9BXX2 1392 aa27.65■■■□□ 2.02
PRKCB-209ENST00000498058 TMEM132EQ6IEE7 984 aa27.65■■■□□ 2.02
PRKCB-209ENST00000498058 WAPLQ7Z5K2 1190 aa27.65■■■□□ 2.02
PRKCB-209ENST00000498058 TECPR2O15040 1411 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms