RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM39A-212ENST00000497993 ADCY10Q96PN6 1610 aa9.66□□□□□ -0.86
TMEM39A-212ENST00000497993 KIAA0556O60303 1618 aa9.65□□□□□ -0.86
TMEM39A-212ENST00000497993 UBTFP17480 764 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-212ENST00000497993 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
TMEM39A-212ENST00000497993 MAPKBP1O60336 1514 aa9.65□□□□□ -0.86
TMEM39A-212ENST00000497993 KIF21BO75037 1637 aa9.64□□□□□ -0.87
TMEM39A-212ENST00000497993 EN1Q05925 392 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-212ENST00000497993 TRIM26Q12899 539 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-212ENST00000497993 DISP1Q96F81 1524 aa9.64□□□□□ -0.87
TMEM39A-212ENST00000497993 CYB5RLQ6IPT4 315 aa9.63□□□□□ -0.87
TMEM39A-212ENST00000497993 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
TMEM39A-212ENST00000497993 UHRF1BP1LA0JNW5 1464 aa9.62□□□□□ -0.87
TMEM39A-212ENST00000497993 ZNF687Q8N1G0 1237 aa9.62□□□□□ -0.87
TMEM39A-212ENST00000497993 ADAM33Q9BZ11 813 aa9.62□□□□□ -0.87
TMEM39A-212ENST00000497993 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
TMEM39A-212ENST00000497993 MAP3K7O43318 606 aa9.61□□□□□ -0.87
TMEM39A-212ENST00000497993 SAMD9Q5K651 1589 aa9.61□□□□□ -0.87
TMEM39A-212ENST00000497993 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-212ENST00000497993 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-212ENST00000497993 RBM33Q96EV2 1170 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-212ENST00000497993 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 PTPREP23469 700 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 PBX2P40425 430 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 C6orf132Q5T0Z8 1188 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
TMEM39A-212ENST00000497993 CERKQ8TCT0 537 aa9.58□□□□□ -0.88
TMEM39A-212ENST00000497993 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
TMEM39A-212ENST00000497993 GOLGA3Q08378 1498 aa9.58□□□□□ -0.88
TMEM39A-212ENST00000497993 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
TMEM39A-212ENST00000497993 ABCC2Q92887 1545 aa9.57□□□□□ -0.88
TMEM39A-212ENST00000497993 ABCA8O94911 1581 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 NUTM2FA1L443 756 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 POTEMA6NI47 508 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 ARHGAP33O14559 1287 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 POTEGQ6S5H5 508 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 KDM5BQ9UGL1 1544 aa9.56□□□□□ -0.88
TMEM39A-212ENST00000497993 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-212ENST00000497993 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
TMEM39A-212ENST00000497993 GLI2P10070 1586 aa9.54□□□□□ -0.88
TMEM39A-212ENST00000497993 ABCC10Q5T3U5 1492 aa9.54□□□□□ -0.88
TMEM39A-212ENST00000497993 ZCCHC11Q5TAX3 1644 aaKnown RBP9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 PPP1R3GB7ZBB8 358 aa9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 FCHSD2O94868 740 aa9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 PTGDRQ13258 359 aa9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 KCNK17Q96T54 332 aa9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 PTPRGP23470 1445 aa9.53□□□□□ -0.88
TMEM39A-212ENST00000497993 EFCAB5A4FU69 1503 aa9.52□□□□□ -0.88
TMEM39A-212ENST00000497993 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
TMEM39A-212ENST00000497993 UACAQ9BZF9 1416 aa9.52□□□□□ -0.89
TMEM39A-212ENST00000497993 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
TMEM39A-212ENST00000497993 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-212ENST00000497993 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-212ENST00000497993 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-212ENST00000497993 MAP3K4Q9Y6R4 1608 aa9.5□□□□□ -0.89
TMEM39A-212ENST00000497993 COL9A1P20849 921 aa9.5□□□□□ -0.89
TMEM39A-212ENST00000497993 HRCP23327 699 aa9.5□□□□□ -0.89
TMEM39A-212ENST00000497993 PSEN2P49810 448 aa9.5□□□□□ -0.89
TMEM39A-212ENST00000497993 HIC1Q14526 733 aa9.5□□□□□ -0.89
TMEM39A-212ENST00000497993 GPR37O15354 613 aa9.49□□□□□ -0.89
TMEM39A-212ENST00000497993 SLC4A5Q9BY07 1137 aa9.49□□□□□ -0.89
TMEM39A-212ENST00000497993 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-212ENST00000497993 AXIN2Q9Y2T1 843 aa9.49□□□□□ -0.89
TMEM39A-212ENST00000497993 PLB1Q6P1J6 1458 aa9.48□□□□□ -0.89
TMEM39A-212ENST00000497993 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
TMEM39A-212ENST00000497993 RAPGEF6Q8TEU7 1601 aa9.48□□□□□ -0.89
TMEM39A-212ENST00000497993 GNPATO15228 680 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 PRSS12P56730 875 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 CDAN1Q8IWY9 1227 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 ZBED2Q9BTP6 218 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 SLC24A3Q9HC58 644 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 PCDH10Q9P2E7 1040 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 CFAP43Q8NDM7 1665 aa9.47□□□□□ -0.89
TMEM39A-212ENST00000497993 TK2O00142 265 aa9.46□□□□□ -0.9
TMEM39A-212ENST00000497993 ZMYND10O75800 440 aa9.46□□□□□ -0.9
TMEM39A-212ENST00000497993 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.9
TMEM39A-212ENST00000497993 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
TMEM39A-212ENST00000497993 DMRTA1Q5VZB9 504 aa9.45□□□□□ -0.9
TMEM39A-212ENST00000497993 TRIM6-TRIM34B2RNG4 842 aa9.44□□□□□ -0.9
TMEM39A-212ENST00000497993 BARGINQ6ZT62 677 aa9.44□□□□□ -0.9
TMEM39A-212ENST00000497993 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-212ENST00000497993 ASXL2Q76L83 1435 aa9.44□□□□□ -0.9
TMEM39A-212ENST00000497993 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
TMEM39A-212ENST00000497993 EPRSP07814 1512 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-212ENST00000497993 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
TMEM39A-212ENST00000497993 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
TMEM39A-212ENST00000497993 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
TMEM39A-212ENST00000497993 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
TMEM39A-212ENST00000497993 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
TMEM39A-212ENST00000497993 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
TMEM39A-212ENST00000497993 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
TMEM39A-212ENST00000497993 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
TMEM39A-212ENST00000497993 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
TMEM39A-212ENST00000497993 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
TMEM39A-212ENST00000497993 LRRIQ1Q96JM4 1722 aa9.4□□□□□ -0.9
TMEM39A-212ENST00000497993 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms