RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 RRP7BPQ9NSQ0 103 aa15.55■□□□□ 0.08
SRSF4-205ENST00000497015 NKTRP30414 1462 aaKnown RBP15.54■□□□□ 0.08
SRSF4-205ENST00000497015 MEX3CQ5U5Q3 659 aaKnown RBP15.54■□□□□ 0.08
SRSF4-205ENST00000497015 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
SRSF4-205ENST00000497015 DUOX2Q9NRD8 1548 aa15.53■□□□□ 0.08
SRSF4-205ENST00000497015 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
SRSF4-205ENST00000497015 KANK4Q5T7N3 995 aaPredicted RBP15.53■□□□□ 0.08
SRSF4-205ENST00000497015 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
SRSF4-205ENST00000497015 NUTM2BA6NNL0 878 aaPredicted RBP15.51■□□□□ 0.07
SRSF4-205ENST00000497015 NUTM2EB1AL46 878 aaPredicted RBP15.51■□□□□ 0.07
SRSF4-205ENST00000497015 NUTM2AQ8IVF1 878 aaPredicted RBP15.51■□□□□ 0.07
SRSF4-205ENST00000497015 NOS1P29475 1434 aa15.51■□□□□ 0.07
SRSF4-205ENST00000497015 BCANQ96GW7 911 aa15.5■□□□□ 0.07
SRSF4-205ENST00000497015 CDK12Q9NYV4 1490 aaPredicted RBP15.5■□□□□ 0.07
SRSF4-205ENST00000497015 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
SRSF4-205ENST00000497015 AFF2P51816 1311 aa15.49■□□□□ 0.07
SRSF4-205ENST00000497015 KDM5AP29375 1690 aaKnown RBP15.49■□□□□ 0.07
SRSF4-205ENST00000497015 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
SRSF4-205ENST00000497015 TBX22Q9Y458 520 aa15.48■□□□□ 0.07
SRSF4-205ENST00000497015 ABCC5O15440 1437 aa15.48■□□□□ 0.07
SRSF4-205ENST00000497015 CHD2O14647 1828 aaKnown RBP15.47■□□□□ 0.07
SRSF4-205ENST00000497015 ZFYVE9O95405 1425 aa15.47■□□□□ 0.07
SRSF4-205ENST00000497015 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
SRSF4-205ENST00000497015 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.07
SRSF4-205ENST00000497015 DIP2AQ14689 1571 aa15.46■□□□□ 0.07
SRSF4-205ENST00000497015 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
SRSF4-205ENST00000497015 ERBINQ96RT1 1412 aa15.46■□□□□ 0.07
SRSF4-205ENST00000497015 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
SRSF4-205ENST00000497015 QTRT2Q9H974 415 aaKnown RBP15.46■□□□□ 0.07
SRSF4-205ENST00000497015 PLEKHG1Q9ULL1 1385 aa15.46■□□□□ 0.07
SRSF4-205ENST00000497015 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
SRSF4-205ENST00000497015 RGS12O14924 1447 aa15.45■□□□□ 0.06
SRSF4-205ENST00000497015 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
SRSF4-205ENST00000497015 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
SRSF4-205ENST00000497015 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
SRSF4-205ENST00000497015 ADGRB3O60242 1522 aa15.43■□□□□ 0.06
SRSF4-205ENST00000497015 LOC105371045A0A1W2PR82 267 aa15.43■□□□□ 0.06
SRSF4-205ENST00000497015 NUTM2DQ5VT03 806 aaPredicted RBP15.43■□□□□ 0.06
SRSF4-205ENST00000497015 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
SRSF4-205ENST00000497015 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
SRSF4-205ENST00000497015 KANK1Q14678 1352 aa15.42■□□□□ 0.06
SRSF4-205ENST00000497015 ATF3P18847 181 aa15.42■□□□□ 0.06
SRSF4-205ENST00000497015 RBM6P78332 1123 aaKnown RBP15.42■□□□□ 0.06
SRSF4-205ENST00000497015 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
SRSF4-205ENST00000497015 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
SRSF4-205ENST00000497015 DDX17Q92841 729 aaKnown RBP15.41■□□□□ 0.06
SRSF4-205ENST00000497015 CHIC2Q9UKJ5 165 aa15.41■□□□□ 0.06
SRSF4-205ENST00000497015 PTPRUQ92729 1446 aa15.4■□□□□ 0.06
SRSF4-205ENST00000497015 C8orf37Q96NL8 207 aa15.39■□□□□ 0.05
SRSF4-205ENST00000497015 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
SRSF4-205ENST00000497015 SETD5Q9C0A6 1442 aa15.39■□□□□ 0.05
SRSF4-205ENST00000497015 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
SRSF4-205ENST00000497015 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
SRSF4-205ENST00000497015 SETBP1Q9Y6X0 1596 aa15.36■□□□□ 0.05
SRSF4-205ENST00000497015 DAPK1P53355 1430 aa15.36■□□□□ 0.05
SRSF4-205ENST00000497015 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
SRSF4-205ENST00000497015 LRRC59Q96AG4 307 aaKnown RBP15.36■□□□□ 0.05
SRSF4-205ENST00000497015 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
SRSF4-205ENST00000497015 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
SRSF4-205ENST00000497015 TMEM131LA2VDJ0 1609 aa15.35■□□□□ 0.05
SRSF4-205ENST00000497015 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
SRSF4-205ENST00000497015 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
SRSF4-205ENST00000497015 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.05
SRSF4-205ENST00000497015 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
SRSF4-205ENST00000497015 PIK3R4Q99570 1358 aa15.33■□□□□ 0.04
SRSF4-205ENST00000497015 MST1RQ04912 1400 aa15.33■□□□□ 0.04
SRSF4-205ENST00000497015 CROCC2H7BZ55 1655 aa15.32■□□□□ 0.04
SRSF4-205ENST00000497015 ADAMTS2O95450 1211 aa15.32■□□□□ 0.04
SRSF4-205ENST00000497015 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
SRSF4-205ENST00000497015 NGLY1Q96IV0 654 aa15.32■□□□□ 0.04
SRSF4-205ENST00000497015 CHGAP10645 457 aaKnown RBP15.31■□□□□ 0.04
SRSF4-205ENST00000497015 ANKRD30AQ9BXX3 1397 aa15.3■□□□□ 0.04
SRSF4-205ENST00000497015 GCC2Q8IWJ2 1684 aa15.29■□□□□ 0.04
SRSF4-205ENST00000497015 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
SRSF4-205ENST00000497015 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
SRSF4-205ENST00000497015 ATAD2Q6PL18 1390 aa15.29■□□□□ 0.04
SRSF4-205ENST00000497015 NHSL1Q5SYE7 1610 aa15.28■□□□□ 0.04
SRSF4-205ENST00000497015 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
SRSF4-205ENST00000497015 USP21Q9UK80 565 aa15.28■□□□□ 0.04
SRSF4-205ENST00000497015 DCCP43146 1447 aa15.27■□□□□ 0.04
SRSF4-205ENST00000497015 EP400Q96L91 3159 aa15.27■□□□□ 0.03
SRSF4-205ENST00000497015 METP08581 1390 aa15.25■□□□□ 0.03
SRSF4-205ENST00000497015 TRPM2O94759 1503 aa15.24■□□□□ 0.03
SRSF4-205ENST00000497015 TRPC5Q9UL62 973 aaPredicted RBP15.24■□□□□ 0.03
SRSF4-205ENST00000497015 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
SRSF4-205ENST00000497015 ATRNO75882 1429 aa15.23■□□□□ 0.03
SRSF4-205ENST00000497015 SOS2Q07890 1332 aaPredicted RBP15.22■□□□□ 0.03
SRSF4-205ENST00000497015 CCDC125Q86Z20 511 aa15.22■□□□□ 0.03
SRSF4-205ENST00000497015 ADGRL2O95490 1459 aa15.21■□□□□ 0.03
SRSF4-205ENST00000497015 UNC13BO14795 1591 aa15.21■□□□□ 0.03
SRSF4-205ENST00000497015 ANKRD50Q9ULJ7 1429 aa15.21■□□□□ 0.03
SRSF4-205ENST00000497015 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.02
SRSF4-205ENST00000497015 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
SRSF4-205ENST00000497015 XRN1Q8IZH2 1706 aaKnown RBP15.2■□□□□ 0.02
SRSF4-205ENST00000497015 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
SRSF4-205ENST00000497015 DEFB132Q7Z7B7 95 aa15.19■□□□□ 0.02
SRSF4-205ENST00000497015 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
SRSF4-205ENST00000497015 E9PCH4 1651 aa15.17■□□□□ 0.02
SRSF4-205ENST00000497015 APLP2Q06481 763 aa15.16■□□□□ 0.02
SRSF4-205ENST00000497015 GJD4Q96KN9 370 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms