RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 ATP6V1DQ9Y5K8 247 aa10.77□□□□□ -0.69
MACF1-224ENST00000496804 DZIP1LQ8IYY4 767 aaKnown RBP10.77□□□□□ -0.69
MACF1-224ENST00000496804 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
MACF1-224ENST00000496804 ERICH4A6NGS2 130 aa10.77□□□□□ -0.69
MACF1-224ENST00000496804 ARGLU1Q9NWB6 273 aaPredicted RBP10.76□□□□□ -0.69
MACF1-224ENST00000496804 C8orf34Q49A92 452 aa10.76□□□□□ -0.69
MACF1-224ENST00000496804 NAP1L2Q9ULW6 460 aaPredicted RBP10.76□□□□□ -0.69
MACF1-224ENST00000496804 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
MACF1-224ENST00000496804 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
MACF1-224ENST00000496804 FHOD3Q2V2M9 1422 aa10.76□□□□□ -0.69
MACF1-224ENST00000496804 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
MACF1-224ENST00000496804 K7ELQ4 463 aaPredicted RBP10.76□□□□□ -0.69
MACF1-224ENST00000496804 BCAR3O75815 825 aa10.75□□□□□ -0.69
MACF1-224ENST00000496804 GOLGA6L19H0YKK7 550 aa10.75□□□□□ -0.69
MACF1-224ENST00000496804 FGD1P98174 961 aa10.75□□□□□ -0.69
MACF1-224ENST00000496804 TNPO1Q92973 898 aaKnown RBP10.75□□□□□ -0.69
MACF1-224ENST00000496804 CALCOCO1Q9P1Z2 691 aa10.75□□□□□ -0.69
MACF1-224ENST00000496804 NUP155O75694 1391 aa10.75□□□□□ -0.69
MACF1-224ENST00000496804 NBPF8Q3BBV2 869 aa10.75□□□□□ -0.69
MACF1-224ENST00000496804 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
MACF1-224ENST00000496804 TPM4P67936 248 aa10.74□□□□□ -0.69
MACF1-224ENST00000496804 REC8O95072 547 aa10.74□□□□□ -0.69
MACF1-224ENST00000496804 GNL2Q13823 731 aaKnown RBP10.74□□□□□ -0.69
MACF1-224ENST00000496804 TPD52L1Q16890 204 aaPredicted RBP10.74□□□□□ -0.69
MACF1-224ENST00000496804 ANKRD30AQ9BXX3 1397 aa10.73□□□□□ -0.69
MACF1-224ENST00000496804 KIF20AO95235 890 aa10.73□□□□□ -0.69
MACF1-224ENST00000496804 CCDC112Q8NEF3 446 aa10.73□□□□□ -0.69
MACF1-224ENST00000496804 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
MACF1-224ENST00000496804 PRIMPOLQ96LW4 560 aa10.73□□□□□ -0.69
MACF1-224ENST00000496804 NBPF1Q3BBV0 1214 aa10.73□□□□□ -0.69
MACF1-224ENST00000496804 TAF7LQ5H9L4 462 aa10.72□□□□□ -0.69
MACF1-224ENST00000496804 TBC1D32Q96NH3 1257 aa10.72□□□□□ -0.69
MACF1-224ENST00000496804 BECN2A8MW95 431 aa10.72□□□□□ -0.69
MACF1-224ENST00000496804 TERF1P54274 439 aa10.72□□□□□ -0.69
MACF1-224ENST00000496804 DNAJC2Q99543 621 aaKnown RBP10.72□□□□□ -0.69
MACF1-224ENST00000496804 MAPKBP1O60336 1514 aa10.71□□□□□ -0.69
MACF1-224ENST00000496804 RABEP1Q15276 862 aa10.71□□□□□ -0.69
MACF1-224ENST00000496804 CHMP4AQ9BY43 222 aa10.71□□□□□ -0.69
MACF1-224ENST00000496804 SYCE3A1L190 88 aa10.71□□□□□ -0.69
MACF1-224ENST00000496804 TIGD1Q96MW7 591 aa10.71□□□□□ -0.69
MACF1-224ENST00000496804 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.7
MACF1-224ENST00000496804 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.7
MACF1-224ENST00000496804 CCAR2Q8N163 923 aaKnown RBP10.71□□□□□ -0.7
MACF1-224ENST00000496804 CWC22Q9HCG8 908 aaKnown RBP10.71□□□□□ -0.7
MACF1-224ENST00000496804 NCOA1Q15788 1441 aa10.71□□□□□ -0.7
MACF1-224ENST00000496804 CDC45O75419 566 aa10.71□□□□□ -0.7
MACF1-224ENST00000496804 NINLQ9Y2I6 1382 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 SPC24Q8NBT2 197 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 SMARCA2P51531 1590 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 IRX3P78415 501 aaPredicted RBP10.7□□□□□ -0.7
MACF1-224ENST00000496804 HS1BP3Q53T59 392 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 HOMER1Q86YM7 354 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 MNS1Q8NEH6 495 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 ZKSCAN5Q9Y2L8 839 aa10.7□□□□□ -0.7
MACF1-224ENST00000496804 INTS3Q68E01 1043 aaKnown RBP10.69□□□□□ -0.7
MACF1-224ENST00000496804 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
MACF1-224ENST00000496804 HAP1P54257 671 aaPredicted RBP10.69□□□□□ -0.7
MACF1-224ENST00000496804 KLHL40Q2TBA0 621 aa10.69□□□□□ -0.7
MACF1-224ENST00000496804 TRERF1Q96PN7 1200 aa10.69□□□□□ -0.7
MACF1-224ENST00000496804 MIA2Q96PC5 1412 aa10.69□□□□□ -0.7
MACF1-224ENST00000496804 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
MACF1-224ENST00000496804 NPHP1O15259 732 aa10.68□□□□□ -0.7
MACF1-224ENST00000496804 HMMRO75330 724 aa10.68□□□□□ -0.7
MACF1-224ENST00000496804 OS9Q13438 667 aaPredicted RBP10.68□□□□□ -0.7
MACF1-224ENST00000496804 CALRP27797 417 aaKnown RBP10.68□□□□□ -0.7
MACF1-224ENST00000496804 SSFA2P28290 1259 aa10.68□□□□□ -0.7
MACF1-224ENST00000496804 CHMP3Q9Y3E7 222 aa10.68□□□□□ -0.7
MACF1-224ENST00000496804 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
MACF1-224ENST00000496804 TRIM5Q9C035 493 aa10.67□□□□□ -0.7
MACF1-224ENST00000496804 LEKR1Q6ZMV7 388 aa10.67□□□□□ -0.7
MACF1-224ENST00000496804 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
MACF1-224ENST00000496804 ERICH3Q5RHP9 1530 aa10.67□□□□□ -0.7
MACF1-224ENST00000496804 VGLL3A8MV65 326 aa10.66□□□□□ -0.7
MACF1-224ENST00000496804 AK7Q96M32 723 aa10.66□□□□□ -0.7
MACF1-224ENST00000496804 DEF6Q9H4E7 631 aa10.66□□□□□ -0.7
MACF1-224ENST00000496804 IGSF3O75054 1194 aa10.66□□□□□ -0.7
MACF1-224ENST00000496804 MYOM3Q5VTT5 1437 aa10.65□□□□□ -0.7
MACF1-224ENST00000496804 SLFN5Q08AF3 891 aa10.65□□□□□ -0.7
MACF1-224ENST00000496804 BAG4O95429 457 aaKnown RBP10.64□□□□□ -0.71
MACF1-224ENST00000496804 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
MACF1-224ENST00000496804 ZSCAN23Q3MJ62 389 aa10.64□□□□□ -0.71
MACF1-224ENST00000496804 HSP90B2PQ58FF3 399 aa10.64□□□□□ -0.71
MACF1-224ENST00000496804 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
MACF1-224ENST00000496804 RUNDC1Q96C34 613 aa10.64□□□□□ -0.71
MACF1-224ENST00000496804 NOL7Q9UMY1 257 aaKnown RBP10.64□□□□□ -0.71
MACF1-224ENST00000496804 IGHDP01880 384 aa10.63□□□□□ -0.71
MACF1-224ENST00000496804 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
MACF1-224ENST00000496804 RILPL2Q969X0 211 aa10.63□□□□□ -0.71
MACF1-224ENST00000496804 PLEKHH2Q8IVE3 1493 aa10.63□□□□□ -0.71
MACF1-224ENST00000496804 NOLC1Q14978 699 aaKnown RBP eCLIP10.63□□□□□ -0.71
MACF1-224ENST00000496804 MCM2P49736 904 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 NEK4P51957 841 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 SMC3Q9UQE7 1217 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 BICD2Q8TD16 824 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 TIAM1Q13009 1591 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 DMTNQ08495 405 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 ANO2Q9NQ90 1003 aa10.62□□□□□ -0.71
MACF1-224ENST00000496804 CCDC192P0DO97 292 aa10.61□□□□□ -0.71
MACF1-224ENST00000496804 MVPQ14764 893 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms