RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 MYOM2P54296 1465 aa29.38■■■□□ 2.29
FGFR1-223ENST00000496296 RPGRIP1LQ68CZ1 1315 aa29.37■■■□□ 2.29
FGFR1-223ENST00000496296 LAMC1P11047 1609 aa29.36■■■□□ 2.29
FGFR1-223ENST00000496296 ERVK-7P63135 1459 aa29.35■■■□□ 2.29
FGFR1-223ENST00000496296 NBPF1Q3BBV0 1214 aa29.34■■■□□ 2.29
FGFR1-223ENST00000496296 IFT172Q9UG01 1749 aa29.33■■■□□ 2.29
FGFR1-223ENST00000496296 IDI1Q13907 227 aa29.32■■■□□ 2.28
FGFR1-223ENST00000496296 FBXO31Q5XUX0 539 aaPredicted RBP29.31■■■□□ 2.28
FGFR1-223ENST00000496296 ZMYM3Q14202 1370 aa29.28■■■□□ 2.28
FGFR1-223ENST00000496296 SPATA31D1Q6ZQQ2 1576 aa29.27■■■□□ 2.28
FGFR1-223ENST00000496296 ST20-MTHFSA0A0A6YYL1 179 aa29.27■■■□□ 2.28
FGFR1-223ENST00000496296 KIAA1210Q9ULL0 1709 aa29.27■■■□□ 2.28
FGFR1-223ENST00000496296 ADAMTSL3P82987 1691 aa29.26■■■□□ 2.27
FGFR1-223ENST00000496296 C11orf95C9JLR9 678 aaPredicted RBP29.26■■■□□ 2.27
FGFR1-223ENST00000496296 PPLO60437 1756 aa29.26■■■□□ 2.27
FGFR1-223ENST00000496296 ADGRF5Q8IZF2 1346 aa29.26■■■□□ 2.27
FGFR1-223ENST00000496296 NRXN1Q9ULB1 1477 aa29.25■■■□□ 2.27
FGFR1-223ENST00000496296 KIF7Q2M1P5 1343 aa29.24■■■□□ 2.27
FGFR1-223ENST00000496296 VGFO15240 615 aaPredicted RBP29.22■■■□□ 2.27
FGFR1-223ENST00000496296 STAG3Q9UJ98 1225 aa29.21■■■□□ 2.27
FGFR1-223ENST00000496296 TMEM131LA2VDJ0 1609 aa29.2■■■□□ 2.27
FGFR1-223ENST00000496296 NEXMIFQ5QGS0 1516 aa29.18■■■□□ 2.26
FGFR1-223ENST00000496296 CFAP70Q5T0N1 1121 aa29.17■■■□□ 2.26
FGFR1-223ENST00000496296 PIK3C2GO75747 1445 aa29.17■■■□□ 2.26
FGFR1-223ENST00000496296 SCAF11Q99590 1463 aaKnown RBP29.17■■■□□ 2.26
FGFR1-223ENST00000496296 FER1L4A9Z1Z3 1794 aa29.16■■■□□ 2.26
FGFR1-223ENST00000496296 PTPRMP28827 1452 aa29.15■■■□□ 2.26
FGFR1-223ENST00000496296 EIF3AQ14152 1382 aaKnown RBP29.14■■■□□ 2.25
FGFR1-223ENST00000496296 ZFYVE9O95405 1425 aa29.14■■■□□ 2.25
FGFR1-223ENST00000496296 IQGAP1P46940 1657 aa29.14■■■□□ 2.25
FGFR1-223ENST00000496296 MYO5BQ9ULV0 1848 aa29.11■■■□□ 2.25
FGFR1-223ENST00000496296 C14orf93Q9H972 538 aaKnown RBP29.11■■■□□ 2.25
FGFR1-223ENST00000496296 TNRQ92752 1358 aa29.11■■■□□ 2.25
FGFR1-223ENST00000496296 POLR3GLQ9BT43 218 aa29.1■■■□□ 2.25
FGFR1-223ENST00000496296 SETBP1Q9Y6X0 1596 aa29.1■■■□□ 2.25
FGFR1-223ENST00000496296 RIMS1Q86UR5 1692 aaKnown RBP29.1■■■□□ 2.25
FGFR1-223ENST00000496296 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
FGFR1-223ENST00000496296 PLPPR3Q6T4P5 718 aa29.07■■■□□ 2.24
FGFR1-223ENST00000496296 A2ML1A8K2U0 1454 aa29.07■■■□□ 2.24
FGFR1-223ENST00000496296 TESK2Q96S53 571 aa29.06■■■□□ 2.24
FGFR1-223ENST00000496296 PRKRIP1Q9H875 184 aaPredicted RBP29.06■■■□□ 2.24
FGFR1-223ENST00000496296 TMF1P82094 1093 aa29.06■■■□□ 2.24
FGFR1-223ENST00000496296 SUPT16HQ9Y5B9 1047 aaKnown RBP29.04■■■□□ 2.24
FGFR1-223ENST00000496296 SLC24A1O60721 1099 aa29.02■■■□□ 2.24
FGFR1-223ENST00000496296 CEBPAP49715 358 aaPredicted RBP29■■■□□ 2.23
FGFR1-223ENST00000496296 C3P01024 1663 aa28.99■■■□□ 2.23
FGFR1-223ENST00000496296 ADGRB1O14514 1584 aa28.98■■■□□ 2.23
FGFR1-223ENST00000496296 RIMS2Q9UQ26 1411 aa28.98■■■□□ 2.23
FGFR1-223ENST00000496296 KDM5AP29375 1690 aaKnown RBP28.98■■■□□ 2.23
FGFR1-223ENST00000496296 HDGFP51858 240 aaKnown RBP28.97■■■□□ 2.23
FGFR1-223ENST00000496296 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.97■■■□□ 2.23
FGFR1-223ENST00000496296 NLRP1Q9C000 1473 aa28.97■■■□□ 2.23
FGFR1-223ENST00000496296 CDCA8Q53HL2 280 aa28.96■■■□□ 2.23
FGFR1-223ENST00000496296 DISP3Q9P2K9 1392 aa28.96■■■□□ 2.23
FGFR1-223ENST00000496296 TMEM132EQ6IEE7 984 aa28.93■■■□□ 2.22
FGFR1-223ENST00000496296 TRAK1Q9UPV9 953 aa28.91■■■□□ 2.22
FGFR1-223ENST00000496296 MYO3AQ8NEV4 1616 aa28.91■■■□□ 2.22
FGFR1-223ENST00000496296 CENPJQ9HC77 1338 aaPredicted RBP28.9■■■□□ 2.22
FGFR1-223ENST00000496296 UBR1Q8IWV7 1749 aa28.9■■■□□ 2.22
FGFR1-223ENST00000496296 SBNO2Q9Y2G9 1366 aa28.88■■■□□ 2.21
FGFR1-223ENST00000496296 TMEM2Q9UHN6 1383 aa28.85■■■□□ 2.21
FGFR1-223ENST00000496296 ALKQ9UM73 1620 aa28.85■■■□□ 2.21
FGFR1-223ENST00000496296 CCDC184Q52MB2 194 aa28.85■■■□□ 2.21
FGFR1-223ENST00000496296 SENP3Q9H4L4 574 aaPredicted RBP28.83■■■□□ 2.21
FGFR1-223ENST00000496296 KTN1Q86UP2 1357 aaKnown RBP28.82■■■□□ 2.2
FGFR1-223ENST00000496296 ASXL1Q8IXJ9 1541 aa28.81■■■□□ 2.2
FGFR1-223ENST00000496296 HNRNPUQ00839 825 aaKnown RBP eCLIP28.8■■■□□ 2.24e-7■■□□□ 13.9
FGFR1-223ENST00000496296 MRS2Q9HD23 443 aa28.79■■■□□ 2.2
FGFR1-223ENST00000496296 QRICH2Q9H0J4 1663 aa28.78■■■□□ 2.2
FGFR1-223ENST00000496296 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
FGFR1-223ENST00000496296 ARHGEF28Q8N1W1 1705 aaKnown RBP28.78■■■□□ 2.2
FGFR1-223ENST00000496296 STK26Q9P289 416 aa28.77■■■□□ 2.2
FGFR1-223ENST00000496296 LMTK3Q96Q04 1460 aa28.77■■■□□ 2.2
FGFR1-223ENST00000496296 THEMISQ8N1K5 641 aaPredicted RBP28.76■■■□□ 2.19
FGFR1-223ENST00000496296 EID1Q9Y6B2 187 aa28.76■■■□□ 2.19
FGFR1-223ENST00000496296 BCANQ96GW7 911 aa28.75■■■□□ 2.19
FGFR1-223ENST00000496296 PANK3Q9H999 370 aa28.73■■■□□ 2.19
FGFR1-223ENST00000496296 HSPA2P54652 639 aa28.72■■■□□ 2.19
FGFR1-223ENST00000496296 NRXN3Q9Y4C0 1643 aa28.72■■■□□ 2.19
FGFR1-223ENST00000496296 SLIT1O75093 1534 aa28.71■■■□□ 2.19
FGFR1-223ENST00000496296 TXNDC2Q86VQ3 553 aa28.71■■■□□ 2.19
FGFR1-223ENST00000496296 ZBED9Q6R2W3 1325 aa28.71■■■□□ 2.19
FGFR1-223ENST00000496296 SETD1BQ9UPS6 1966 aaKnown RBP28.7■■■□□ 2.19
FGFR1-223ENST00000496296 SETD1AO15047 1707 aaKnown RBP28.7■■■□□ 2.18
FGFR1-223ENST00000496296 LRPPRCP42704 1394 aaKnown RBP28.7■■■□□ 2.18
FGFR1-223ENST00000496296 PLEKHG1Q9ULL1 1385 aa28.7■■■□□ 2.18
FGFR1-223ENST00000496296 POGKQ9P215 609 aa28.7■■■□□ 2.18
FGFR1-223ENST00000496296 ARHGAP23Q9P227 1491 aa28.69■■■□□ 2.18
FGFR1-223ENST00000496296 EVC2Q86UK5 1308 aa28.69■■■□□ 2.18
FGFR1-223ENST00000496296 PER1O15534 1290 aaPredicted RBP28.68■■■□□ 2.18
FGFR1-223ENST00000496296 NEFLP07196 543 aa28.67■■■□□ 2.18
FGFR1-223ENST00000496296 CEP170BQ9Y4F5 1589 aaPredicted RBP28.67■■■□□ 2.18
FGFR1-223ENST00000496296 DLC1Q96QB1 1528 aa28.67■■■□□ 2.18
FGFR1-223ENST00000496296 LTKP29376 864 aa28.66■■■□□ 2.18
FGFR1-223ENST00000496296 FKBP8Q14318 412 aa28.66■■■□□ 2.18
FGFR1-223ENST00000496296 PUS7Q96PZ0 661 aaKnown RBP28.66■■■□□ 2.18
FGFR1-223ENST00000496296 PRAM1Q96QH2 718 aa28.66■■■□□ 2.18
FGFR1-223ENST00000496296 CNGB1Q14028 1251 aaPredicted RBP28.66■■■□□ 2.18
FGFR1-223ENST00000496296 RALBP1Q15311 655 aa28.66■■■□□ 2.18
FGFR1-223ENST00000496296 ABCC11Q96J66 1382 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms