RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 RPGRIP1LQ68CZ1 1315 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 IDI1Q13907 227 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 PSME1Q06323 249 aa11.99□□□□□ -0.49
VPS13B-206ENST00000496144 ADGRL2O95490 1459 aa11.99□□□□□ -0.49
VPS13B-206ENST00000496144 ZNF772Q68DY9 489 aaPredicted RBP11.99□□□□□ -0.49
VPS13B-206ENST00000496144 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
VPS13B-206ENST00000496144 C3P01024 1663 aa11.99□□□□□ -0.49
VPS13B-206ENST00000496144 TMEM2Q9UHN6 1383 aa11.99□□□□□ -0.49
VPS13B-206ENST00000496144 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
VPS13B-206ENST00000496144 MAST1Q9Y2H9 1570 aa11.98□□□□□ -0.49
VPS13B-206ENST00000496144 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
VPS13B-206ENST00000496144 HSPA1LP34931 641 aa11.97□□□□□ -0.49
VPS13B-206ENST00000496144 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
VPS13B-206ENST00000496144 STK26Q9P289 416 aa11.97□□□□□ -0.49
VPS13B-206ENST00000496144 ABCC3O15438 1527 aa11.96□□□□□ -0.49
VPS13B-206ENST00000496144 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
VPS13B-206ENST00000496144 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.49
VPS13B-206ENST00000496144 NGLY1Q96IV0 654 aa11.96□□□□□ -0.5
VPS13B-206ENST00000496144 MYO3AQ8NEV4 1616 aa11.95□□□□□ -0.5
VPS13B-206ENST00000496144 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
VPS13B-206ENST00000496144 CCDC144AA2RUR9 1427 aa11.95□□□□□ -0.5
VPS13B-206ENST00000496144 TBX22Q9Y458 520 aa11.95□□□□□ -0.5
VPS13B-206ENST00000496144 PLXNC1O60486 1568 aa11.95□□□□□ -0.5
VPS13B-206ENST00000496144 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
VPS13B-206ENST00000496144 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
VPS13B-206ENST00000496144 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
VPS13B-206ENST00000496144 LRRC59Q96AG4 307 aaKnown RBP11.93□□□□□ -0.5
VPS13B-206ENST00000496144 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
VPS13B-206ENST00000496144 EIF3AQ14152 1382 aaKnown RBP11.93□□□□□ -0.5
VPS13B-206ENST00000496144 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
VPS13B-206ENST00000496144 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
VPS13B-206ENST00000496144 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
VPS13B-206ENST00000496144 TMEM94Q12767 1356 aa11.92□□□□□ -0.5
VPS13B-206ENST00000496144 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
VPS13B-206ENST00000496144 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
VPS13B-206ENST00000496144 ZBTB7CA1YPR0 619 aa11.9□□□□□ -0.5
VPS13B-206ENST00000496144 SOCS7O14512 581 aa11.89□□□□□ -0.51
VPS13B-206ENST00000496144 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
VPS13B-206ENST00000496144 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
VPS13B-206ENST00000496144 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
VPS13B-206ENST00000496144 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
VPS13B-206ENST00000496144 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
VPS13B-206ENST00000496144 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
VPS13B-206ENST00000496144 GPRASP1Q5JY77 1395 aa11.88□□□□□ -0.51
VPS13B-206ENST00000496144 JCADQ9P266 1359 aa11.87□□□□□ -0.51
VPS13B-206ENST00000496144 RXRBP28702 533 aa11.87□□□□□ -0.51
VPS13B-206ENST00000496144 MPHOSPH9Q99550 1183 aa11.87□□□□□ -0.51
VPS13B-206ENST00000496144 LTKP29376 864 aa11.86□□□□□ -0.51
VPS13B-206ENST00000496144 TRPM2O94759 1503 aa11.86□□□□□ -0.51
VPS13B-206ENST00000496144 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
VPS13B-206ENST00000496144 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
VPS13B-206ENST00000496144 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
VPS13B-206ENST00000496144 EVA1CP58658 441 aa11.84□□□□□ -0.51
VPS13B-206ENST00000496144 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
VPS13B-206ENST00000496144 C8orf37Q96NL8 207 aa11.84□□□□□ -0.51
VPS13B-206ENST00000496144 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
VPS13B-206ENST00000496144 ADGRB3O60242 1522 aa11.83□□□□□ -0.51
VPS13B-206ENST00000496144 ZNF142P52746 1687 aaPredicted RBP11.83□□□□□ -0.51
VPS13B-206ENST00000496144 ADAMTS2O95450 1211 aa11.83□□□□□ -0.51
VPS13B-206ENST00000496144 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.51
VPS13B-206ENST00000496144 UNC13BO14795 1591 aa11.83□□□□□ -0.52
VPS13B-206ENST00000496144 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
VPS13B-206ENST00000496144 SAFB2Q14151 953 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS13B-206ENST00000496144 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
VPS13B-206ENST00000496144 CEP152O94986 1710 aa11.81□□□□□ -0.52
VPS13B-206ENST00000496144 PRDM15P57071 1507 aaPredicted RBP11.81□□□□□ -0.52
VPS13B-206ENST00000496144 NCOA3Q9Y6Q9 1424 aa11.81□□□□□ -0.52
VPS13B-206ENST00000496144 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
VPS13B-206ENST00000496144 NUTM2FA1L443 756 aa11.8□□□□□ -0.52
VPS13B-206ENST00000496144 DCAF11Q8TEB1 546 aa11.8□□□□□ -0.52
VPS13B-206ENST00000496144 LMTK2Q8IWU2 1503 aa11.8□□□□□ -0.52
VPS13B-206ENST00000496144 SYNMO15061 1565 aa11.8□□□□□ -0.52
VPS13B-206ENST00000496144 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
VPS13B-206ENST00000496144 MED14O60244 1454 aa11.79□□□□□ -0.52
VPS13B-206ENST00000496144 TET3O43151 1660 aa11.78□□□□□ -0.52
VPS13B-206ENST00000496144 GTF3C3Q9Y5Q9 886 aa11.78□□□□□ -0.52
VPS13B-206ENST00000496144 DEPDC5O75140 1603 aa11.78□□□□□ -0.52
VPS13B-206ENST00000496144 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.53
VPS13B-206ENST00000496144 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.53
VPS13B-206ENST00000496144 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
VPS13B-206ENST00000496144 FAM135BQ49AJ0 1406 aa11.76□□□□□ -0.53
VPS13B-206ENST00000496144 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
VPS13B-206ENST00000496144 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
VPS13B-206ENST00000496144 USP21Q9UK80 565 aa11.75□□□□□ -0.53
VPS13B-206ENST00000496144 NOS1P29475 1434 aa11.75□□□□□ -0.53
VPS13B-206ENST00000496144 SLIT1O75093 1534 aa11.75□□□□□ -0.53
VPS13B-206ENST00000496144 QTRT2Q9H974 415 aaKnown RBP11.74□□□□□ -0.53
VPS13B-206ENST00000496144 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
VPS13B-206ENST00000496144 LRRC7Q96NW7 1537 aa11.74□□□□□ -0.53
VPS13B-206ENST00000496144 PIK3C2BO00750 1634 aa11.74□□□□□ -0.53
VPS13B-206ENST00000496144 POLR3GLQ9BT43 218 aa11.73□□□□□ -0.53
VPS13B-206ENST00000496144 DDX10Q13206 875 aaKnown RBP11.73□□□□□ -0.53
VPS13B-206ENST00000496144 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
VPS13B-206ENST00000496144 RBM6P78332 1123 aaKnown RBP11.72□□□□□ -0.53
VPS13B-206ENST00000496144 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
VPS13B-206ENST00000496144 L3MBTL2Q969R5 705 aa11.72□□□□□ -0.53
VPS13B-206ENST00000496144 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
VPS13B-206ENST00000496144 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
VPS13B-206ENST00000496144 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
VPS13B-206ENST00000496144 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms