RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
TM9SF4-207ENST00000495749 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
TM9SF4-207ENST00000495749 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
TM9SF4-207ENST00000495749 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
TM9SF4-207ENST00000495749 UNC13BO14795 1591 aa12.07□□□□□ -0.48
TM9SF4-207ENST00000495749 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
TM9SF4-207ENST00000495749 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
TM9SF4-207ENST00000495749 ADAMTS8Q9UP79 889 aa12.07□□□□□ -0.48
TM9SF4-207ENST00000495749 IDI1Q13907 227 aa12.06□□□□□ -0.48
TM9SF4-207ENST00000495749 SLC12A5Q9H2X9 1139 aa12.06□□□□□ -0.48
TM9SF4-207ENST00000495749 IQGAP3Q86VI3 1631 aa12.06□□□□□ -0.48
TM9SF4-207ENST00000495749 ABCA9Q8IUA7 1624 aa12.06□□□□□ -0.48
TM9SF4-207ENST00000495749 BRD4O60885 1362 aaPredicted RBP12.06□□□□□ -0.48
TM9SF4-207ENST00000495749 PLIN1O60240 522 aa12.05□□□□□ -0.48
TM9SF4-207ENST00000495749 LRPPRCP42704 1394 aaKnown RBP12.05□□□□□ -0.48
TM9SF4-207ENST00000495749 IPO9Q96P70 1041 aaKnown RBP12.05□□□□□ -0.48
TM9SF4-207ENST00000495749 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
TM9SF4-207ENST00000495749 NOS1P29475 1434 aa12.05□□□□□ -0.48
TM9SF4-207ENST00000495749 EXOC6Q8TAG9 804 aa12.05□□□□□ -0.48
TM9SF4-207ENST00000495749 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
TM9SF4-207ENST00000495749 E9PCH4 1651 aa12.04□□□□□ -0.48
TM9SF4-207ENST00000495749 ZNF518AQ6AHZ1 1483 aa12.04□□□□□ -0.48
TM9SF4-207ENST00000495749 YEATS2Q9ULM3 1422 aa12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 NEUROD2Q15784 382 aa12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 PPP2R1AP30153 589 aa12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 PRDM15P57071 1507 aaPredicted RBP12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 CARD14Q9BXL6 1004 aa12.03□□□□□ -0.48
TM9SF4-207ENST00000495749 NPATQ14207 1427 aa12.02□□□□□ -0.49
TM9SF4-207ENST00000495749 TRPM1Q7Z4N2 1603 aa12.02□□□□□ -0.49
TM9SF4-207ENST00000495749 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
TM9SF4-207ENST00000495749 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-207ENST00000495749 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
TM9SF4-207ENST00000495749 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
TM9SF4-207ENST00000495749 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
TM9SF4-207ENST00000495749 PTPRTO14522 1441 aa12.01□□□□□ -0.49
TM9SF4-207ENST00000495749 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
TM9SF4-207ENST00000495749 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
TM9SF4-207ENST00000495749 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
TM9SF4-207ENST00000495749 TSPOAP1O95153 1857 aa12□□□□□ -0.49
TM9SF4-207ENST00000495749 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
TM9SF4-207ENST00000495749 CDCA8Q53HL2 280 aa12□□□□□ -0.49
TM9SF4-207ENST00000495749 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-207ENST00000495749 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
TM9SF4-207ENST00000495749 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
TM9SF4-207ENST00000495749 SRPK2P78362 688 aaKnown RBP11.97□□□□□ -0.49
TM9SF4-207ENST00000495749 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
TM9SF4-207ENST00000495749 KIDINS220Q9ULH0 1771 aa11.97□□□□□ -0.49
TM9SF4-207ENST00000495749 TRPM2O94759 1503 aa11.97□□□□□ -0.49
TM9SF4-207ENST00000495749 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
TM9SF4-207ENST00000495749 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
TM9SF4-207ENST00000495749 APAF1O14727 1248 aa11.96□□□□□ -0.49
TM9SF4-207ENST00000495749 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
TM9SF4-207ENST00000495749 C14orf93Q9H972 538 aaKnown RBP11.96□□□□□ -0.49
TM9SF4-207ENST00000495749 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
TM9SF4-207ENST00000495749 TCERG1O14776 1098 aaKnown RBP11.96□□□□□ -0.5
TM9SF4-207ENST00000495749 POGKQ9P215 609 aa11.96□□□□□ -0.5
TM9SF4-207ENST00000495749 ARAP3Q8WWN8 1544 aa11.96□□□□□ -0.5
TM9SF4-207ENST00000495749 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
TM9SF4-207ENST00000495749 PDE4AP27815 886 aa11.95□□□□□ -0.5
TM9SF4-207ENST00000495749 MORC1Q86VD1 984 aa11.95□□□□□ -0.5
TM9SF4-207ENST00000495749 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
TM9SF4-207ENST00000495749 FBLN1P23142 703 aa11.95□□□□□ -0.5
TM9SF4-207ENST00000495749 ESF1Q9H501 851 aaKnown RBP11.94□□□□□ -0.5
TM9SF4-207ENST00000495749 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
TM9SF4-207ENST00000495749 CFAP74Q9C0B2 1584 aa11.93□□□□□ -0.5
TM9SF4-207ENST00000495749 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
TM9SF4-207ENST00000495749 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
TM9SF4-207ENST00000495749 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
TM9SF4-207ENST00000495749 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
TM9SF4-207ENST00000495749 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 C20orf194Q5TEA3 1177 aa11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 MADDQ8WXG6 1647 aa11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 STAC3Q96MF2 364 aa11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 BACH2Q9BYV9 841 aa11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 GGNBP2Q9H3C7 697 aa11.92□□□□□ -0.5
TM9SF4-207ENST00000495749 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 TET3O43151 1660 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 CEP152O94986 1710 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 CRBNQ96SW2 442 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 NEO1Q92859 1461 aa11.91□□□□□ -0.5
TM9SF4-207ENST00000495749 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
TM9SF4-207ENST00000495749 EFCAB6Q5THR3 1501 aa11.9□□□□□ -0.5
TM9SF4-207ENST00000495749 MTHFSP49914 203 aa11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 EIF2AK4Q9P2K8 1649 aaKnown RBP11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 MS4A1P11836 297 aa11.89□□□□□ -0.51
TM9SF4-207ENST00000495749 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
TM9SF4-207ENST00000495749 NSD3Q9BZ95 1437 aa11.88□□□□□ -0.51
TM9SF4-207ENST00000495749 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms